Experiment: m.b. L-Lysine 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2383 and Dshi_2384 are separated by 9 nucleotides Dshi_2384 and Dshi_2385 are separated by 407 nucleotides Dshi_2385 and Dshi_2386 are separated by 71 nucleotides Dshi_2386 and Dshi_2387 are separated by 166 nucleotides
Dshi_2383: Dshi_2383 - Cytochrome c oxidase subunit I type (RefSeq), at 2,517,133 to 2,518,809
_2383
Dshi_2384: Dshi_2384 - integral membrane protein-like protein (RefSeq), at 2,518,819 to 2,519,340
_2384
Dshi_2385: Dshi_2385 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,519,748 to 2,520,101
_2385
Dshi_2386: Dshi_2386 - GatB/YqeY (RefSeq), at 2,520,173 to 2,520,634
_2386
Dshi_2387: Dshi_2387 - carbamoyl-phosphate synthase, small subunit (RefSeq), at 2,520,801 to 2,521,970
_2387
Position (kb)
2519
2520
2521 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2519.245 kb on - strand, within Dshi_2384 at 2519.250 kb on + strand, within Dshi_2384 at 2519.511 kb on + strand at 2519.519 kb on - strand at 2519.519 kb on - strand at 2519.583 kb on - strand at 2519.583 kb on - strand at 2519.867 kb on - strand, within Dshi_2385 at 2520.706 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. L-Lysine 200 mM remove 2,519,245 - Dshi_2384 0.82 -0.7 2,519,250 + Dshi_2384 0.83 -1.0 2,519,511 + -0.3 2,519,519 - +4.2 2,519,519 - -0.7 2,519,583 - -0.2 2,519,583 - -0.2 2,519,867 - Dshi_2385 0.34 -1.3 2,520,706 + +0.3
Or see this region's nucleotide sequence