Experiment: m.b. acetate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4191 and Dshi_4192 are separated by 92 nucleotides Dshi_4192 and Dshi_4193 overlap by 4 nucleotides Dshi_4193 and Dshi_4194 are separated by 20 nucleotides
Dshi_4191: Dshi_4191 - TRAP dicarboxylate transporter, DctP subunit (RefSeq), at 37,297 to 38,292
_4191
Dshi_4192: Dshi_4192 - Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq), at 38,385 to 38,972
_4192
Dshi_4193: Dshi_4193 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 38,969 to 40,258
_4193
Dshi_4194: Dshi_4194 - Gamma-glutamyltransferase (RefSeq), at 40,279 to 41,874
_4194
Position (kb) 38
39
40
41 Strain fitness (log2 ratio) -2
-1
0
1
2 at 38.008 kb on + strand, within Dshi_4191 at 38.041 kb on - strand, within Dshi_4191 at 38.059 kb on - strand, within Dshi_4191 at 38.066 kb on + strand, within Dshi_4191 at 38.401 kb on - strand at 38.849 kb on + strand, within Dshi_4192 at 38.849 kb on + strand, within Dshi_4192 at 38.857 kb on - strand, within Dshi_4192 at 38.898 kb on + strand, within Dshi_4192 at 39.196 kb on - strand, within Dshi_4193 at 39.257 kb on + strand, within Dshi_4193 at 39.448 kb on + strand, within Dshi_4193 at 39.721 kb on - strand, within Dshi_4193 at 39.915 kb on - strand, within Dshi_4193 at 40.101 kb on + strand, within Dshi_4193 at 40.275 kb on - strand at 40.561 kb on + strand, within Dshi_4194 at 40.791 kb on + strand, within Dshi_4194
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 200 mM remove 38,008 + Dshi_4191 0.71 +0.8 38,041 - Dshi_4191 0.75 +0.8 38,059 - Dshi_4191 0.77 -1.8 38,066 + Dshi_4191 0.77 -1.2 38,401 - +0.6 38,849 + Dshi_4192 0.79 -0.5 38,849 + Dshi_4192 0.79 -1.0 38,857 - Dshi_4192 0.80 -0.0 38,898 + Dshi_4192 0.87 -1.9 39,196 - Dshi_4193 0.18 -0.2 39,257 + Dshi_4193 0.22 -0.6 39,448 + Dshi_4193 0.37 +2.6 39,721 - Dshi_4193 0.58 +0.8 39,915 - Dshi_4193 0.73 +1.0 40,101 + Dshi_4193 0.88 -0.3 40,275 - +0.2 40,561 + Dshi_4194 0.18 -1.2 40,791 + Dshi_4194 0.32 +0.5
Or see this region's nucleotide sequence