Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1530

Experiment: m.b. acetate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. acetate 200 mM
1,590,291	+		Dshi_1528	0.70	+0.8
1,590,299	+		Dshi_1528	0.71	+2.2
1,590,307	-		Dshi_1528	0.72	-1.5
1,590,307	-		Dshi_1528	0.72	-1.4
1,590,362	+		Dshi_1528	0.78	-1.4
1,590,362	+		Dshi_1528	0.78	-0.1
1,590,423	-		Dshi_1528	0.85	+0.2
1,590,479	+				-0.6
1,590,503	-				-1.6
1,590,513	+				+1.2
1,590,549	-				+0.0
1,590,563	+				-0.4
1,590,586	+				+0.7
1,591,322	-				-0.1
1,591,333	-		Dshi_1530	0.11	-1.8
1,591,333	-		Dshi_1530	0.11	-1.5
1,591,376	+		Dshi_1530	0.19	+0.3
1,591,384	-		Dshi_1530	0.21	-1.4
1,591,558	+		Dshi_1530	0.54	-0.9
1,591,613	-		Dshi_1530	0.64	-0.3
1,591,630	+		Dshi_1530	0.68	+0.1
1,591,663	-		Dshi_1530	0.74	-0.2
1,591,664	-		Dshi_1530	0.74	+0.2
1,591,705	+		Dshi_1530	0.82	-0.8
1,591,719	+		Dshi_1530	0.85	-1.5
1,591,771	+				-0.2
1,591,873	+				-1.0
1,591,878	+				-0.3
1,591,995	+		Dshi_1531	0.19	-0.4
1,591,995	+		Dshi_1531	0.19	-1.4
1,592,000	+		Dshi_1531	0.20	-0.2
1,592,000	+		Dshi_1531	0.20	-2.1
1,592,000	+		Dshi_1531	0.20	-0.9
1,592,000	+		Dshi_1531	0.20	-0.2
1,592,000	+		Dshi_1531	0.20	-1.2
1,592,000	+		Dshi_1531	0.20	+0.2
1,592,000	+		Dshi_1531	0.20	-0.2
1,592,000	+		Dshi_1531	0.20	-0.4
1,592,000	+		Dshi_1531	0.20	-2.8
1,592,000	+		Dshi_1531	0.20	-0.4
1,592,000	+		Dshi_1531	0.20	-0.7
1,592,000	+		Dshi_1531	0.20	+1.1
1,592,000	+		Dshi_1531	0.20	-1.2
1,592,000	+		Dshi_1531	0.20	-1.5
1,592,000	+		Dshi_1531	0.20	-0.7
1,592,000	+		Dshi_1531	0.20	-1.3
1,592,000	+		Dshi_1531	0.20	-1.2
1,592,000	+		Dshi_1531	0.20	-1.3
1,592,000	+		Dshi_1531	0.20	+0.0
1,592,000	+		Dshi_1531	0.20	-0.9
1,592,000	+		Dshi_1531	0.20	+0.5
1,592,000	+		Dshi_1531	0.20	-0.3
1,592,000	+		Dshi_1531	0.20	+1.3
1,592,000	+		Dshi_1531	0.20	-0.4
1,592,003	-		Dshi_1531	0.21	-0.7
1,592,003	-		Dshi_1531	0.21	-0.0
1,592,003	-		Dshi_1531	0.21	-0.3
1,592,003	-		Dshi_1531	0.21	-0.3
1,592,008	-		Dshi_1531	0.22	-0.3
1,592,008	-		Dshi_1531	0.22	+0.3
1,592,008	-		Dshi_1531	0.22	-0.0
1,592,008	-		Dshi_1531	0.22	-1.3
1,592,008	-		Dshi_1531	0.22	-1.1
1,592,008	-		Dshi_1531	0.22	-0.9
1,592,008	-		Dshi_1531	0.22	-1.0
1,592,008	-		Dshi_1531	0.22	-0.2
1,592,008	-		Dshi_1531	0.22	-0.2
1,592,008	-		Dshi_1531	0.22	-0.6
1,592,008	-		Dshi_1531	0.22	-0.8
1,592,008	-		Dshi_1531	0.22	-0.1
1,592,008	-		Dshi_1531	0.22	-0.7
1,592,008	-		Dshi_1531	0.22	-0.9
1,592,008	-		Dshi_1531	0.22	-0.5
1,592,008	-		Dshi_1531	0.22	+2.2
1,592,008	-		Dshi_1531	0.22	-0.3
1,592,008	-		Dshi_1531	0.22	+0.6
1,592,008	-		Dshi_1531	0.22	-0.6
1,592,008	-		Dshi_1531	0.22	+0.2
1,592,008	-		Dshi_1531	0.22	-0.4
1,592,008	-		Dshi_1531	0.22	-0.4
1,592,008	-		Dshi_1531	0.22	-0.0
1,592,008	-		Dshi_1531	0.22	-0.1
1,592,008	-		Dshi_1531	0.22	-1.4
1,592,008	-		Dshi_1531	0.22	-3.3
1,592,010	+		Dshi_1531	0.23	+1.2
1,592,010	+		Dshi_1531	0.23	-1.1
1,592,010	+		Dshi_1531	0.23	+0.9
1,592,010	+		Dshi_1531	0.23	+0.5
1,592,013	-		Dshi_1531	0.23	+0.2
1,592,018	-		Dshi_1531	0.24	-0.7
1,592,018	-		Dshi_1531	0.24	-1.7
1,592,018	-		Dshi_1531	0.24	-0.7
1,592,018	-		Dshi_1531	0.24	-0.1
1,592,018	-		Dshi_1531	0.24	-0.2
1,592,018	-		Dshi_1531	0.24	+0.5
1,592,018	-		Dshi_1531	0.24	+1.9
1,592,033	+		Dshi_1531	0.27	-0.8
1,592,048	+		Dshi_1531	0.31	+0.2
1,592,053	+		Dshi_1531	0.32	-0.4
1,592,053	+		Dshi_1531	0.32	-0.4
1,592,053	+		Dshi_1531	0.32	-0.2
1,592,053	+		Dshi_1531	0.32	+0.7
1,592,053	+		Dshi_1531	0.32	-1.1
1,592,053	+		Dshi_1531	0.32	-2.0
1,592,053	+		Dshi_1531	0.32	-0.7
1,592,056	-		Dshi_1531	0.32	-0.4
1,592,061	-		Dshi_1531	0.33	+2.8
1,592,061	-		Dshi_1531	0.33	-0.7
1,592,061	-		Dshi_1531	0.33	-1.7
1,592,061	-		Dshi_1531	0.33	-0.8
1,592,067	-		Dshi_1531	0.35	+0.5
1,592,154	+		Dshi_1531	0.53	-1.0
1,592,173	+		Dshi_1531	0.57	-0.7
1,592,190	-		Dshi_1531	0.61	-1.5
1,592,195	+		Dshi_1531	0.62	-1.6
1,592,204	-		Dshi_1531	0.64	-1.8
1,592,218	+		Dshi_1531	0.66	+0.4
1,592,218	-		Dshi_1531	0.66	-0.6
1,592,238	+		Dshi_1531	0.71	-0.8
1,592,266	-		Dshi_1531	0.77	-0.8
1,592,266	-		Dshi_1531	0.77	+0.6
1,592,280	-		Dshi_1531	0.80	+0.5
1,592,324	-		Dshi_1531	0.89	-0.6
1,592,329	+				-1.5
1,592,334	-				+1.3
1,592,340	+				+1.2
1,592,347	-				-0.7
1,592,347	-				+0.6
1,592,347	-				-0.5
1,592,348	-				-0.8
1,592,349	+				-0.0
1,592,350	+				-0.2
1,592,350	+				+1.8
1,592,369	-				-0.4
1,592,376	+				-2.0
1,592,384	+				+0.0
1,592,384	+				-0.4
1,592,384	+				-1.1
1,592,384	-				-0.8
1,592,392	-				-0.6
1,592,435	+				+0.6
1,592,443	-				+3.3
1,592,446	+				-0.8
1,592,449	-				-0.7
1,592,451	+				-2.0
1,592,451	+				+0.8
1,592,454	-				+0.0
1,592,454	-				+0.9
1,592,454	-				-0.6
1,592,459	-				+2.8
1,592,459	-				+0.2
1,592,461	-				-1.3
1,592,464	-				-0.6
1,592,479	-				+0.9
1,592,486	+				-3.3
1,592,486	+				-1.4
1,592,486	+				-0.5
1,592,492	-				-1.0
1,592,494	-				+0.1
1,592,494	-				-1.2
1,592,494	-				-1.7
1,592,494	-				-1.1
1,592,570	-				-0.4
1,592,574	+				-1.6
1,592,579	-				-1.1
1,592,595	+		Dshi_1532	0.10	-1.8
1,592,595	+		Dshi_1532	0.10	+0.2
1,592,595	+		Dshi_1532	0.10	-0.9
1,592,595	+		Dshi_1532	0.10	+0.4
1,592,595	+		Dshi_1532	0.10	-0.5
1,592,595	+		Dshi_1532	0.10	+0.2
1,592,595	+		Dshi_1532	0.10	+0.6
1,592,595	+		Dshi_1532	0.10	-2.4
1,592,595	+		Dshi_1532	0.10	-0.9
1,592,595	+		Dshi_1532	0.10	-2.3
1,592,595	+		Dshi_1532	0.10	-1.1
1,592,595	+		Dshi_1532	0.10	-0.1
1,592,595	+		Dshi_1532	0.10	+0.5
1,592,600	+		Dshi_1532	0.11	-1.8
1,592,600	+		Dshi_1532	0.11	+0.3
1,592,600	+		Dshi_1532	0.11	+0.0
1,592,600	+		Dshi_1532	0.11	+0.7
1,592,600	+		Dshi_1532	0.11	-2.2
1,592,600	+		Dshi_1532	0.11	-0.7
1,592,600	+		Dshi_1532	0.11	-0.9
1,592,600	+		Dshi_1532	0.11	+0.3
1,592,603	-		Dshi_1532	0.11	-0.1
1,592,603	-		Dshi_1532	0.11	+0.5
1,592,603	-		Dshi_1532	0.11	+1.2
1,592,603	-		Dshi_1532	0.11	+2.0
1,592,603	-		Dshi_1532	0.11	-1.1
1,592,603	-		Dshi_1532	0.11	+0.9
1,592,603	-		Dshi_1532	0.11	-0.5
1,592,603	-		Dshi_1532	0.11	-1.5
1,592,603	-		Dshi_1532	0.11	-0.2
1,592,603	-		Dshi_1532	0.11	-0.3
1,592,603	-		Dshi_1532	0.11	-0.6
1,592,606	+		Dshi_1532	0.11	-0.2
1,592,607	+		Dshi_1532	0.11	+0.2
1,592,608	+		Dshi_1532	0.11	+1.4
1,592,608	+		Dshi_1532	0.11	+0.8
1,592,608	-		Dshi_1532	0.11	-2.4
1,592,608	-		Dshi_1532	0.11	-0.5
1,592,608	-		Dshi_1532	0.11	-1.0
1,592,608	-		Dshi_1532	0.11	-0.1
1,592,608	-		Dshi_1532	0.11	+1.2
1,592,608	-		Dshi_1532	0.11	-0.1
1,592,608	-		Dshi_1532	0.11	-0.1
1,592,608	-		Dshi_1532	0.11	-0.8
1,592,608	-		Dshi_1532	0.11	-1.1
1,592,608	-		Dshi_1532	0.11	+0.1
1,592,615	-		Dshi_1532	0.12	-1.3
1,592,615	-		Dshi_1532	0.12	+0.4
1,592,616	-		Dshi_1532	0.12	-1.6
1,592,626	-		Dshi_1532	0.13	-0.2
1,592,627	+		Dshi_1532	0.13	-0.5
1,592,628	-		Dshi_1532	0.13	-0.8
1,592,632	+		Dshi_1532	0.14	-0.1
1,592,632	+		Dshi_1532	0.14	-1.4
1,592,633	-		Dshi_1532	0.14	+0.0
1,592,635	-		Dshi_1532	0.14	-1.6
1,592,660	+		Dshi_1532	0.16	-0.5
1,592,666	+		Dshi_1532	0.17	-0.7
1,592,670	-		Dshi_1532	0.17	+0.5
1,592,671	+		Dshi_1532	0.17	+0.6
1,592,672	-		Dshi_1532	0.17	+0.6
1,592,676	+		Dshi_1532	0.18	+2.8
1,592,685	+		Dshi_1532	0.19	-2.5
1,592,685	+		Dshi_1532	0.19	-0.7
1,592,693	-		Dshi_1532	0.19	-0.3
1,592,698	+		Dshi_1532	0.20	-0.9
1,592,700	+		Dshi_1532	0.20	-1.6
1,592,708	-		Dshi_1532	0.21	-1.5
1,592,708	-		Dshi_1532	0.21	+0.4
1,592,708	-		Dshi_1532	0.21	+0.3
1,592,757	+		Dshi_1532	0.25	-1.3
1,592,784	-		Dshi_1532	0.28	-1.1