Experiment: m.b. acetate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1472 and Dshi_1473 overlap by 4 nucleotides Dshi_1473 and Dshi_1474 overlap by 37 nucleotides Dshi_1474 and Dshi_1475 are separated by 39 nucleotides
Dshi_1472: Dshi_1472 - phospholipid/glycerol acyltransferase (RefSeq), at 1,526,145 to 1,526,921
_1472
Dshi_1473: Dshi_1473 - phospholipid/glycerol acyltransferase (RefSeq), at 1,526,918 to 1,527,763
_1473
Dshi_1474: Dshi_1474 - glutamyl-tRNA synthetase class Ic (RefSeq), at 1,527,727 to 1,528,590
_1474
Dshi_1475: Dshi_1475 - gid protein (RefSeq), at 1,528,630 to 1,529,985
_1475
Position (kb)
1527
1528
1529 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1526.735 kb on + strand, within Dshi_1472 at 1526.782 kb on - strand, within Dshi_1472 at 1526.861 kb on + strand at 1526.878 kb on + strand at 1526.886 kb on - strand at 1526.957 kb on - strand at 1527.169 kb on + strand, within Dshi_1473 at 1527.517 kb on + strand, within Dshi_1473 at 1527.684 kb on + strand at 1527.917 kb on + strand, within Dshi_1474 at 1527.950 kb on - strand, within Dshi_1474 at 1528.070 kb on + strand, within Dshi_1474 at 1528.411 kb on + strand, within Dshi_1474 at 1528.419 kb on - strand, within Dshi_1474 at 1528.419 kb on - strand, within Dshi_1474 at 1528.927 kb on - strand, within Dshi_1475 at 1529.197 kb on - strand, within Dshi_1475 at 1529.401 kb on - strand, within Dshi_1475 at 1529.417 kb on + strand, within Dshi_1475
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 200 mM remove 1,526,735 + Dshi_1472 0.76 +0.1 1,526,782 - Dshi_1472 0.82 -0.6 1,526,861 + -0.6 1,526,878 + +3.8 1,526,886 - -2.0 1,526,957 - -0.8 1,527,169 + Dshi_1473 0.30 +1.2 1,527,517 + Dshi_1473 0.71 +1.4 1,527,684 + -1.5 1,527,917 + Dshi_1474 0.22 +0.4 1,527,950 - Dshi_1474 0.26 -1.2 1,528,070 + Dshi_1474 0.40 -1.2 1,528,411 + Dshi_1474 0.79 -1.9 1,528,419 - Dshi_1474 0.80 -1.3 1,528,419 - Dshi_1474 0.80 +1.5 1,528,927 - Dshi_1475 0.22 -2.4 1,529,197 - Dshi_1475 0.42 -0.2 1,529,401 - Dshi_1475 0.57 +1.2 1,529,417 + Dshi_1475 0.58 +0.1
Or see this region's nucleotide sequence