Experiment: m.b. acetate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0908 and Dshi_0909 overlap by 4 nucleotides Dshi_0909 and Dshi_0910 overlap by 4 nucleotides Dshi_0910 and Dshi_0911 overlap by 4 nucleotides Dshi_0911 and Dshi_0912 overlap by 4 nucleotides
Dshi_0908: Dshi_0908 - transcriptional activator, TenA family (RefSeq), at 931,652 to 932,350
_0908
Dshi_0909: Dshi_0909 - NMT1/THI5 like domain protein (RefSeq), at 932,347 to 933,282
_0909
Dshi_0910: Dshi_0910 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 933,279 to 934,244
_0910
Dshi_0911: Dshi_0911 - Thiamine-phosphate diphosphorylase (RefSeq), at 934,241 to 934,840
_0911
Dshi_0912: Dshi_0912 - thiazole biosynthesis family protein (RefSeq), at 934,837 to 935,631
_0912
Position (kb)
933
934
935 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 932.446 kb on - strand, within Dshi_0909 at 932.644 kb on - strand, within Dshi_0909 at 932.651 kb on + strand, within Dshi_0909 at 932.659 kb on - strand, within Dshi_0909 at 932.688 kb on - strand, within Dshi_0909 at 932.821 kb on - strand, within Dshi_0909 at 932.888 kb on - strand, within Dshi_0909 at 933.202 kb on + strand at 933.210 kb on - strand at 933.215 kb on + strand at 933.250 kb on + strand at 933.258 kb on - strand at 933.384 kb on + strand, within Dshi_0910 at 933.446 kb on - strand, within Dshi_0910 at 933.452 kb on + strand, within Dshi_0910 at 933.488 kb on + strand, within Dshi_0910 at 933.489 kb on + strand, within Dshi_0910 at 933.497 kb on - strand, within Dshi_0910 at 933.645 kb on - strand, within Dshi_0910 at 933.715 kb on - strand, within Dshi_0910 at 933.867 kb on - strand, within Dshi_0910 at 934.109 kb on - strand, within Dshi_0910 at 934.125 kb on + strand, within Dshi_0910 at 934.133 kb on - strand, within Dshi_0910 at 934.215 kb on - strand at 934.281 kb on + strand at 934.676 kb on + strand, within Dshi_0911 at 934.761 kb on + strand, within Dshi_0911 at 935.087 kb on - strand, within Dshi_0912 at 935.127 kb on + strand, within Dshi_0912 at 935.169 kb on - strand, within Dshi_0912
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 200 mM remove 932,446 - Dshi_0909 0.11 -0.8 932,644 - Dshi_0909 0.32 +1.1 932,651 + Dshi_0909 0.32 -0.3 932,659 - Dshi_0909 0.33 +0.5 932,688 - Dshi_0909 0.36 +0.4 932,821 - Dshi_0909 0.51 -1.9 932,888 - Dshi_0909 0.58 -1.5 933,202 + +3.3 933,210 - +1.3 933,215 + +0.3 933,250 + +0.4 933,258 - +0.8 933,384 + Dshi_0910 0.11 -0.8 933,446 - Dshi_0910 0.17 +0.1 933,452 + Dshi_0910 0.18 +1.3 933,488 + Dshi_0910 0.22 +1.7 933,489 + Dshi_0910 0.22 -2.1 933,497 - Dshi_0910 0.23 -1.3 933,645 - Dshi_0910 0.38 -0.6 933,715 - Dshi_0910 0.45 +0.3 933,867 - Dshi_0910 0.61 +0.9 934,109 - Dshi_0910 0.86 -0.8 934,125 + Dshi_0910 0.88 +0.1 934,133 - Dshi_0910 0.88 +0.7 934,215 - -0.6 934,281 + +0.3 934,676 + Dshi_0911 0.72 -1.3 934,761 + Dshi_0911 0.87 +0.3 935,087 - Dshi_0912 0.31 -2.3 935,127 + Dshi_0912 0.36 +2.3 935,169 - Dshi_0912 0.42 -0.5
Or see this region's nucleotide sequence