Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3434

Experiment: m.b. Cholin acetate 40 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cholin acetate 40 mM
3,614,043	+		Dshi_3433	0.29	+0.4
3,614,043	+		Dshi_3433	0.29	-0.5
3,614,043	+		Dshi_3433	0.29	+0.2
3,614,043	+		Dshi_3433	0.29	+0.1
3,614,043	+		Dshi_3433	0.29	+0.7
3,614,043	+		Dshi_3433	0.29	+1.2
3,614,043	+		Dshi_3433	0.29	+0.2
3,614,043	+		Dshi_3433	0.29	-0.8
3,614,043	+		Dshi_3433	0.29	+0.5
3,614,043	+		Dshi_3433	0.29	-0.8
3,614,043	+		Dshi_3433	0.29	-0.4
3,614,043	+		Dshi_3433	0.29	+0.1
3,614,043	+		Dshi_3433	0.29	-0.9
3,614,043	+		Dshi_3433	0.29	+0.2
3,614,043	+		Dshi_3433	0.29	+0.6
3,614,043	+		Dshi_3433	0.29	+0.2
3,614,043	+		Dshi_3433	0.29	-0.5
3,614,043	+		Dshi_3433	0.29	+0.5
3,614,043	+		Dshi_3433	0.29	+0.3
3,614,043	+		Dshi_3433	0.29	-0.3
3,614,043	+		Dshi_3433	0.29	-0.1
3,614,051	-		Dshi_3433	0.29	-0.9
3,614,051	-		Dshi_3433	0.29	-2.1
3,614,051	-		Dshi_3433	0.29	+0.6
3,614,051	-		Dshi_3433	0.29	-2.1
3,614,051	-		Dshi_3433	0.29	+0.1
3,614,051	-		Dshi_3433	0.29	-0.5
3,614,051	-		Dshi_3433	0.29	+0.4
3,614,051	-		Dshi_3433	0.29	-0.4
3,614,051	-		Dshi_3433	0.29	+0.2
3,614,051	-		Dshi_3433	0.29	-1.9
3,614,051	-		Dshi_3433	0.29	+0.6
3,614,051	-		Dshi_3433	0.29	-1.2
3,614,051	-		Dshi_3433	0.29	-0.7
3,614,051	-		Dshi_3433	0.29	+0.2
3,614,051	-		Dshi_3433	0.29	-2.9
3,614,051	-		Dshi_3433	0.29	+0.8
3,614,051	-		Dshi_3433	0.29	+0.0
3,614,051	-		Dshi_3433	0.29	+1.3
3,614,051	-		Dshi_3433	0.29	+0.6
3,614,051	-		Dshi_3433	0.29	+0.4
3,614,051	-		Dshi_3433	0.29	+0.4
3,614,051	-		Dshi_3433	0.29	-0.5
3,614,051	-		Dshi_3433	0.29	+0.2
3,614,051	-		Dshi_3433	0.29	-1.2
3,614,053	-		Dshi_3433	0.29	+1.8
3,614,070	+		Dshi_3433	0.31	+0.6
3,614,070	+		Dshi_3433	0.31	-0.1
3,614,071	+		Dshi_3433	0.31	+0.5
3,614,089	-		Dshi_3433	0.32	+0.5
3,614,097	-		Dshi_3433	0.33	+0.5
3,614,101	+		Dshi_3433	0.33	-3.3
3,614,102	+		Dshi_3433	0.33	+0.9
3,614,102	+		Dshi_3433	0.33	+0.4
3,614,102	-		Dshi_3433	0.33	-0.6
3,614,109	+		Dshi_3433	0.34	+0.8
3,614,110	-		Dshi_3433	0.34	+0.1
3,614,110	-		Dshi_3433	0.34	+0.0
3,614,110	-		Dshi_3433	0.34	-2.1
3,614,117	-		Dshi_3433	0.34	+1.2
3,614,162	-		Dshi_3433	0.38	+1.1
3,614,167	+		Dshi_3433	0.38	+0.2
3,614,169	-		Dshi_3433	0.38	+0.2
3,614,175	-		Dshi_3433	0.39	+0.7
3,614,180	-		Dshi_3433	0.39	-1.2
3,614,206	-		Dshi_3433	0.41	+2.8
3,614,259	+		Dshi_3433	0.45	+0.5
3,614,264	+		Dshi_3433	0.46	+0.2
3,614,269	+		Dshi_3433	0.46	-0.3
3,614,277	-		Dshi_3433	0.47	+0.5
3,614,282	-		Dshi_3433	0.47	+1.0
3,614,283	+		Dshi_3433	0.47	-0.3
3,614,288	+		Dshi_3433	0.47	+0.4
3,614,296	-		Dshi_3433	0.48	-2.2
3,614,298	+		Dshi_3433	0.48	+0.1
3,614,298	+		Dshi_3433	0.48	+0.4
3,614,301	-		Dshi_3433	0.48	-0.5
3,614,306	-		Dshi_3433	0.49	+0.1
3,614,321	-		Dshi_3433	0.50	-0.3
3,614,325	+		Dshi_3433	0.50	+1.1
3,614,326	+		Dshi_3433	0.50	-0.4
3,614,343	-		Dshi_3433	0.52	+0.5
3,614,374	+		Dshi_3433	0.54	+0.1
3,614,399	-		Dshi_3433	0.56	+0.6
3,614,445	+		Dshi_3433	0.59	+0.3
3,614,453	-		Dshi_3433	0.60	+0.6
3,614,467	+		Dshi_3433	0.61	+0.1
3,614,467	+		Dshi_3433	0.61	-0.1
3,614,474	+		Dshi_3433	0.62	+0.2
3,614,475	-		Dshi_3433	0.62	-1.7
3,614,482	-		Dshi_3433	0.62	+2.3
3,614,500	+		Dshi_3433	0.64	-0.5
3,614,522	+		Dshi_3433	0.65	-2.0
3,614,522	+		Dshi_3433	0.65	+0.8
3,614,522	+		Dshi_3433	0.65	-1.9
3,614,580	+		Dshi_3433	0.70	-0.5
3,614,590	+		Dshi_3433	0.70	-1.7
3,614,594	-		Dshi_3433	0.71	-2.9
3,614,599	-		Dshi_3433	0.71	-0.2
3,614,649	+		Dshi_3433	0.75	+0.3
3,614,657	-		Dshi_3433	0.76	-0.8
3,614,676	-		Dshi_3433	0.77	-0.3
3,614,676	-		Dshi_3433	0.77	+0.1
3,614,681	-		Dshi_3433	0.77	-0.8
3,614,721	+		Dshi_3433	0.81	-0.0
3,614,761	+		Dshi_3433	0.84	-0.0
3,614,799	+		Dshi_3433	0.87	+0.6
3,614,804	+		Dshi_3433	0.87	+1.1
3,614,804	+		Dshi_3433	0.87	-0.4
3,614,804	+		Dshi_3433	0.87	+0.7
3,614,804	+		Dshi_3433	0.87	+0.1
3,614,804	+		Dshi_3433	0.87	-1.5
3,614,804	+		Dshi_3433	0.87	-0.5
3,614,804	+		Dshi_3433	0.87	+1.0
3,614,804	+		Dshi_3433	0.87	-0.3
3,614,804	+		Dshi_3433	0.87	+0.6
3,614,804	+		Dshi_3433	0.87	-0.2
3,614,804	+		Dshi_3433	0.87	-1.8
3,614,804	+		Dshi_3433	0.87	+0.1
3,614,804	+		Dshi_3433	0.87	-2.5
3,614,812	-		Dshi_3433	0.88	-0.2
3,614,812	-		Dshi_3433	0.88	-0.3
3,614,812	-		Dshi_3433	0.88	-1.0
3,614,812	-		Dshi_3433	0.88	+1.5
3,614,812	-		Dshi_3433	0.88	+2.1
3,614,812	-		Dshi_3433	0.88	+0.8
3,614,812	-		Dshi_3433	0.88	+0.1
3,614,812	-		Dshi_3433	0.88	+0.0
3,614,828	+		Dshi_3433	0.89	-1.4
3,614,828	+		Dshi_3433	0.89	+0.2
3,614,828	+		Dshi_3433	0.89	+1.1
3,614,861	-				-0.3
3,614,866	+				-1.0
3,614,866	-				-0.0
3,614,871	+				+0.3
3,614,879	-				+0.7
3,614,886	+				-0.6
3,614,890	+				-0.6
3,614,890	+				-0.3
3,614,898	-				+0.0
3,614,900	-				-0.3
3,614,901	+				-0.9
3,614,908	+				+0.1
3,614,908	+				-0.3
3,614,908	+				-2.4
3,614,908	+				-1.1
3,614,925	-				+0.2
3,614,925	-				+0.1
3,614,926	-				+1.2
3,614,935	+				-0.1
3,614,943	-				+2.2
3,614,954	-				-0.4
3,614,983	-				-0.0
3,614,983	-				-1.9
3,614,985	-				+1.0
3,614,990	+				-0.5
3,614,990	+				-1.2
3,614,998	-				+0.3
3,615,029	-				+0.8
3,615,029	-				-0.5
3,615,520	-				-0.9
3,615,520	-				-0.3
3,615,525	-				-0.7
3,615,572	-				-1.3
3,615,622	+				-1.3
3,615,665	-		Dshi_3435	0.14	+0.1
3,615,677	+		Dshi_3435	0.15	-1.0
3,615,722	+		Dshi_3435	0.19	-1.6
3,615,722	-		Dshi_3435	0.19	-0.7
3,615,835	+		Dshi_3435	0.31	-1.1
3,615,843	-		Dshi_3435	0.32	-2.6
3,615,843	-		Dshi_3435	0.32	-1.1
3,615,864	-		Dshi_3435	0.34	-2.7
3,615,878	+		Dshi_3435	0.35	-0.7
3,615,893	+		Dshi_3435	0.37	+0.5
3,615,896	-		Dshi_3435	0.37	-0.8
3,615,907	-		Dshi_3435	0.38	-0.1
3,615,937	-		Dshi_3435	0.41	-3.2
3,616,001	-		Dshi_3435	0.47	-1.0
3,616,039	+		Dshi_3435	0.51	-0.1
3,616,088	-		Dshi_3435	0.56	-0.8
3,616,101	-		Dshi_3435	0.57	-0.7
3,616,124	+		Dshi_3435	0.60	-1.8
3,616,154	-		Dshi_3435	0.63	-3.4
3,616,159	-		Dshi_3435	0.63	-0.5
3,616,215	-		Dshi_3435	0.69	-2.3
3,616,238	+		Dshi_3435	0.71	-3.3
3,616,244	-		Dshi_3435	0.72	-1.5
3,616,269	+		Dshi_3435	0.74	-0.1
3,616,280	+		Dshi_3435	0.75	-1.4
3,616,288	-		Dshi_3435	0.76	-0.4
3,616,393	-		Dshi_3435	0.87	+1.9
3,616,411	-		Dshi_3435	0.88	-0.2
3,616,425	-		Dshi_3435	0.90	-1.3
3,616,430	-				-0.9
3,616,440	+				-0.6
3,616,479	-				-0.8
3,616,507	+				-0.4
3,616,531	-				-0.3