Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4106

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,784,479	+				-0.7
4,784,479	+				+0.0
4,784,479	+				-1.1
4,784,530	+		Pf6N2E2_4105	0.11	-0.6
4,784,530	+		Pf6N2E2_4105	0.11	-0.3
4,784,642	-		Pf6N2E2_4105	0.22	-0.8
4,784,642	-		Pf6N2E2_4105	0.22	+0.8
4,784,672	+		Pf6N2E2_4105	0.25	-0.0
4,784,989	+		Pf6N2E2_4105	0.54	-0.5
4,785,094	+		Pf6N2E2_4105	0.64	+1.3
4,785,094	+		Pf6N2E2_4105	0.64	-0.9
4,785,094	+		Pf6N2E2_4105	0.64	+0.1
4,785,094	+		Pf6N2E2_4105	0.64	-0.1
4,785,095	-		Pf6N2E2_4105	0.64	-0.0
4,785,176	+		Pf6N2E2_4105	0.71	-1.6
4,785,364	+		Pf6N2E2_4105	0.89	-0.2
4,785,364	+		Pf6N2E2_4105	0.89	+0.8
4,785,364	+		Pf6N2E2_4105	0.89	-0.2
4,785,364	+		Pf6N2E2_4105	0.89	-0.8
4,785,365	-		Pf6N2E2_4105	0.89	+0.4
4,785,365	-		Pf6N2E2_4105	0.89	+1.3
4,785,365	-		Pf6N2E2_4105	0.89	-0.1
4,785,452	+				-1.1
4,785,453	-				+0.0
4,785,453	-				-0.7
4,785,456	+				-1.2
4,785,456	+				+0.1
4,785,456	+				-0.2
4,785,456	+				-1.0
4,785,456	+				+0.2
4,785,456	+				+0.5
4,785,457	-				+0.1
4,785,457	-				+0.4
4,785,457	-				+0.5
4,785,457	-				+0.9
4,785,457	-				-0.2
4,785,457	-				-1.2
4,785,457	-				-0.2
4,785,457	-				+1.1
4,785,457	-				+1.5
4,785,457	-				-0.4
4,785,458	+				+0.5
4,785,458	+				-0.4
4,785,458	+				+0.1
4,785,458	+				-0.1
4,785,458	+				+0.2
4,785,458	+				+0.6
4,785,459	-				+1.1
4,785,459	-				-0.0
4,785,522	+				+0.7
4,785,523	-				+0.5
4,785,523	-				+0.4
4,785,626	-		Pf6N2E2_4106	0.17	-0.4
4,785,682	+		Pf6N2E2_4106	0.23	+0.1
4,785,682	+		Pf6N2E2_4106	0.23	+0.6
4,785,682	+		Pf6N2E2_4106	0.23	-0.8
4,785,682	+		Pf6N2E2_4106	0.23	+0.6
4,785,682	+		Pf6N2E2_4106	0.23	+0.6
4,785,682	+		Pf6N2E2_4106	0.23	+0.4
4,785,682	+		Pf6N2E2_4106	0.23	+0.6
4,785,683	-		Pf6N2E2_4106	0.23	+0.2
4,785,683	-		Pf6N2E2_4106	0.23	+0.5
4,785,683	-		Pf6N2E2_4106	0.23	-0.3
4,785,683	-		Pf6N2E2_4106	0.23	-0.7
4,785,722	+		Pf6N2E2_4106	0.28	+0.2
4,785,723	-		Pf6N2E2_4106	0.28	-1.3
4,785,723	-		Pf6N2E2_4106	0.28	+0.3
4,785,876	+		Pf6N2E2_4106	0.45	+1.0
4,785,877	-		Pf6N2E2_4106	0.45	+0.4
4,785,877	-		Pf6N2E2_4106	0.45	-0.7
4,785,877	-		Pf6N2E2_4106	0.45	-1.6
4,786,068	+		Pf6N2E2_4106	0.66	+0.7
4,786,069	-		Pf6N2E2_4106	0.66	+0.5
4,786,116	+		Pf6N2E2_4106	0.71	+1.3
4,786,117	-		Pf6N2E2_4106	0.71	+0.3
4,786,117	-		Pf6N2E2_4106	0.71	+0.5
4,786,130	+		Pf6N2E2_4106	0.73	+0.8
4,786,131	-		Pf6N2E2_4106	0.73	-0.4
4,786,140	+		Pf6N2E2_4106	0.74	-0.1
4,786,140	+		Pf6N2E2_4106	0.74	+0.5
4,786,140	+		Pf6N2E2_4106	0.74	+0.8
4,786,141	-		Pf6N2E2_4106	0.74	+0.8
4,786,141	-		Pf6N2E2_4106	0.74	-0.1
4,786,141	-		Pf6N2E2_4106	0.74	+0.8
4,786,204	-		Pf6N2E2_4106	0.81	-0.2
4,786,260	+		Pf6N2E2_4106	0.87	-0.1
4,786,261	-		Pf6N2E2_4106	0.87	+0.7
4,786,261	-		Pf6N2E2_4106	0.87	+0.2
4,786,261	-		Pf6N2E2_4106	0.87	-0.1
4,786,292	+				-0.2
4,786,292	+				+0.2
4,786,293	-				-0.0
4,786,293	-				+1.6
4,786,302	+				-0.4
4,786,302	+				+0.5
4,786,302	+				-0.7
4,786,302	+				+0.2
4,786,303	-				+0.2
4,786,303	-				-0.1
4,786,303	-				+0.5
4,786,303	-				+0.3
4,786,307	+				+0.6
4,786,307	+				+0.1
4,786,308	-				-0.3
4,786,308	-				+0.9
4,786,308	-				+0.3
4,786,308	-				-0.0
4,786,311	+				+0.2
4,786,311	+				+0.6
4,786,312	-				-0.0
4,786,312	-				-0.2
4,786,312	-				-0.3
4,786,314	+				+0.8
4,786,314	+				+1.4
4,786,314	+				+0.2
4,786,315	-				+0.7
4,786,315	-				-0.8
4,786,315	-				-0.3
4,786,345	+				-0.5
4,786,345	+				+0.0
4,786,345	+				-0.5
4,786,345	+				+0.2
4,786,346	-				+0.1
4,786,346	-				-0.7
4,786,346	-				+0.9
4,786,346	-				-0.2
4,786,346	-				-0.0
4,786,346	-				+0.2
4,786,353	+				+1.4
4,786,353	+				-0.6
4,786,353	+				+0.5
4,786,353	+				-0.0
4,786,353	+				+0.5
4,786,353	+				+3.1
4,786,353	+				+0.6
4,786,353	+				-0.8
4,786,353	+				+0.3
4,786,353	+				+1.0
4,786,353	+				-0.0
4,786,353	+				+0.7
4,786,353	+				-0.7
4,786,353	+				-0.2
4,786,353	+				+0.6
4,786,354	-				+0.0
4,786,354	-				-0.3
4,786,354	-				+1.5
4,786,354	-				+0.3
4,786,354	-				-0.1
4,786,354	-				-1.3
4,786,354	-				-0.2
4,786,354	-				-0.9
4,786,354	-				+0.4
4,786,354	-				+0.2
4,786,354	-				-0.8
4,786,354	-				+0.5
4,786,354	-				+0.6
4,786,357	+				+0.2
4,786,357	+				-0.5
4,786,358	-				+1.0
4,786,358	-				-0.1
4,786,358	-				-0.5
4,786,358	-				+0.4
4,786,358	-				+0.3
4,786,369	+				-0.4
4,786,369	+				+0.7
4,786,370	-				-0.1
4,786,370	-				-0.3
4,786,370	-				-1.9
4,786,693	+		Pf6N2E2_4107	0.51	+1.6
4,786,694	-		Pf6N2E2_4107	0.51	+0.7
4,786,707	+		Pf6N2E2_4107	0.53	-0.6
4,786,708	-		Pf6N2E2_4107	0.53	+0.1
4,786,757	+		Pf6N2E2_4107	0.61	+0.6
4,786,757	+		Pf6N2E2_4107	0.61	+0.8
4,786,758	-		Pf6N2E2_4107	0.61	-0.5
4,786,758	-		Pf6N2E2_4107	0.61	-0.4
4,786,758	-		Pf6N2E2_4107	0.61	+0.2
4,786,758	-		Pf6N2E2_4107	0.61	-0.8
4,786,758	-		Pf6N2E2_4107	0.61	+0.3
4,786,758	-		Pf6N2E2_4107	0.61	+0.5
4,786,758	-		Pf6N2E2_4107	0.61	+0.3
4,786,766	+		Pf6N2E2_4107	0.62	+0.5
4,786,850	-		Pf6N2E2_4107	0.75	+1.0
4,786,850	-		Pf6N2E2_4107	0.75	+0.2
4,786,867	+		Pf6N2E2_4107	0.78	+0.5
4,786,873	+		Pf6N2E2_4107	0.79	+0.5
4,786,873	+		Pf6N2E2_4107	0.79	+1.1
4,786,873	+		Pf6N2E2_4107	0.79	-0.9
4,786,873	+		Pf6N2E2_4107	0.79	+0.5
4,786,874	-		Pf6N2E2_4107	0.79	+0.1
4,786,874	-		Pf6N2E2_4107	0.79	-0.3
4,786,874	-		Pf6N2E2_4107	0.79	-0.0
4,786,874	-		Pf6N2E2_4107	0.79	+1.3
4,786,874	-		Pf6N2E2_4107	0.79	-0.7
4,786,877	+		Pf6N2E2_4107	0.80	+0.3
4,786,877	+		Pf6N2E2_4107	0.80	+1.0
4,786,877	+		Pf6N2E2_4107	0.80	-0.7
4,786,877	+		Pf6N2E2_4107	0.80	+0.4
4,786,877	+		Pf6N2E2_4107	0.80	+0.3
4,786,878	-		Pf6N2E2_4107	0.80	-0.6
4,786,878	-		Pf6N2E2_4107	0.80	-0.2
4,786,878	-		Pf6N2E2_4107	0.80	+0.9
4,786,925	-		Pf6N2E2_4107	0.87	-0.2
4,786,957	+				+0.4
4,787,004	-				-0.3
4,787,030	+				+0.4
4,787,031	-				+0.5
4,787,031	-				-0.2
4,787,211	+				+0.4
4,787,211	+				+0.8
4,787,211	+				+0.6
4,787,212	-				+0.1
4,787,212	-				-0.5
4,787,212	-				-0.1
4,787,317	+				+1.3
4,787,330	+				-0.2
4,787,330	+				+0.5
4,787,331	-				+0.5
4,787,331	-				-0.2
4,787,370	+				+0.4
4,787,370	+				+1.1
4,787,370	+				-0.1
4,787,371	-				-0.1