Experiment: Glucuronamide (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_717 and Pf6N2E2_718 are separated by 155 nucleotides Pf6N2E2_718 and Pf6N2E2_719 are separated by 88 nucleotides Pf6N2E2_719 and Pf6N2E2_720 overlap by 4 nucleotides
Pf6N2E2_717 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 820,718 to 822,250
_717
Pf6N2E2_718 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 822,406 to 823,053
_718
Pf6N2E2_719 - Molybdenum cofactor biosynthesis protein MoaB, at 823,142 to 823,696
_719
Pf6N2E2_720 - Molybdopterin biosynthesis protein MoeA, at 823,693 to 824,928
_720
Position (kb) 822
823
824 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 821.554 kb on + strand, within Pf6N2E2_717 at 821.744 kb on + strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 822.220 kb on + strand at 822.220 kb on + strand at 822.220 kb on + strand at 822.221 kb on - strand at 822.650 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.782 kb on - strand, within Pf6N2E2_718 at 823.067 kb on + strand at 823.067 kb on + strand at 823.067 kb on + strand at 823.068 kb on - strand at 823.068 kb on - strand at 823.084 kb on - strand at 823.193 kb on - strand at 823.303 kb on + strand, within Pf6N2E2_719 at 823.308 kb on - strand, within Pf6N2E2_719 at 823.886 kb on - strand, within Pf6N2E2_720
Per-strain Table
Position Strand Gene LocusTag Fraction Glucuronamide (N) remove 821,554 + Pf6N2E2_717 0.55 +0.6 821,744 + Pf6N2E2_717 0.67 +1.2 821,745 - Pf6N2E2_717 0.67 -1.4 821,745 - Pf6N2E2_717 0.67 -0.4 821,745 - Pf6N2E2_717 0.67 +1.0 822,220 + -2.8 822,220 + +0.0 822,220 + -0.1 822,221 - -2.4 822,650 - Pf6N2E2_718 0.38 -1.3 822,732 - Pf6N2E2_718 0.50 -0.5 822,732 - Pf6N2E2_718 0.50 -1.2 822,732 - Pf6N2E2_718 0.50 -0.8 822,782 - Pf6N2E2_718 0.58 +0.5 823,067 + -3.1 823,067 + +1.0 823,067 + -0.1 823,068 - -2.2 823,068 - +0.5 823,084 - -1.0 823,193 - -2.4 823,303 + Pf6N2E2_719 0.29 +1.6 823,308 - Pf6N2E2_719 0.30 +0.0 823,886 - Pf6N2E2_720 0.16 -0.2
Or see this region's nucleotide sequence