Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5547

Experiment: Glucuronamide (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucuronamide (N)
6,360,521	+				-0.7
6,360,521	+				+1.1
6,360,522	-				+0.9
6,360,522	-				-1.7
6,360,631	-		Pf6N2E2_5546	0.16	-1.6
6,360,631	-		Pf6N2E2_5546	0.16	-1.7
6,360,631	-		Pf6N2E2_5546	0.16	-0.5
6,360,649	-		Pf6N2E2_5546	0.18	-0.6
6,360,819	+		Pf6N2E2_5546	0.43	+0.5
6,360,819	+		Pf6N2E2_5546	0.43	+1.5
6,360,819	+		Pf6N2E2_5546	0.43	-2.9
6,360,819	+		Pf6N2E2_5546	0.43	+1.3
6,360,819	+		Pf6N2E2_5546	0.43	+1.8
6,360,819	+		Pf6N2E2_5546	0.43	+2.1
6,360,819	+		Pf6N2E2_5546	0.43	+0.5
6,360,819	+		Pf6N2E2_5546	0.43	-1.1
6,360,819	+		Pf6N2E2_5546	0.43	-3.1
6,360,819	+		Pf6N2E2_5546	0.43	-1.7
6,360,819	+		Pf6N2E2_5546	0.43	-1.2
6,360,820	-		Pf6N2E2_5546	0.43	-0.0
6,360,820	-		Pf6N2E2_5546	0.43	+1.6
6,360,820	-		Pf6N2E2_5546	0.43	-1.6
6,360,820	-		Pf6N2E2_5546	0.43	-0.5
6,360,820	-		Pf6N2E2_5546	0.43	-0.1
6,360,820	-		Pf6N2E2_5546	0.43	+0.3
6,360,833	+		Pf6N2E2_5546	0.45	-1.5
6,360,833	+		Pf6N2E2_5546	0.45	+0.1
6,360,841	+		Pf6N2E2_5546	0.46	-1.0
6,360,842	-		Pf6N2E2_5546	0.46	+0.7
6,361,424	+				-0.5
6,361,424	+				-0.9
6,361,424	+				+0.6
6,361,425	-				-0.8
6,361,668	-		Pf6N2E2_5547	0.12	-3.3
6,361,746	+		Pf6N2E2_5547	0.17	+1.2
6,361,746	+		Pf6N2E2_5547	0.17	-2.1
6,361,752	+		Pf6N2E2_5547	0.17	+1.1
6,361,752	+		Pf6N2E2_5547	0.17	+0.6
6,361,752	+		Pf6N2E2_5547	0.17	-2.8
6,361,752	+		Pf6N2E2_5547	0.17	-1.7
6,361,752	+		Pf6N2E2_5547	0.17	+1.4
6,361,753	-		Pf6N2E2_5547	0.17	-3.2
6,361,753	-		Pf6N2E2_5547	0.17	+1.1
6,361,753	-		Pf6N2E2_5547	0.17	-0.9
6,361,753	-		Pf6N2E2_5547	0.17	+0.1
6,361,753	-		Pf6N2E2_5547	0.17	+0.1
6,361,753	-		Pf6N2E2_5547	0.17	+1.0
6,361,769	-		Pf6N2E2_5547	0.19	+0.5
6,361,769	-		Pf6N2E2_5547	0.19	+1.1
6,361,851	+		Pf6N2E2_5547	0.24	+1.0
6,361,851	+		Pf6N2E2_5547	0.24	-2.9
6,361,851	+		Pf6N2E2_5547	0.24	+1.0
6,361,851	+		Pf6N2E2_5547	0.24	+2.2
6,361,852	-		Pf6N2E2_5547	0.24	+1.3
6,361,852	-		Pf6N2E2_5547	0.24	+0.7
6,361,918	+		Pf6N2E2_5547	0.29	-0.1
6,361,919	-		Pf6N2E2_5547	0.29	-2.1
6,361,950	+		Pf6N2E2_5547	0.31	+1.7
6,361,951	-		Pf6N2E2_5547	0.31	-2.2
6,361,951	-		Pf6N2E2_5547	0.31	-0.7
6,361,951	-		Pf6N2E2_5547	0.31	+1.2
6,362,008	+		Pf6N2E2_5547	0.35	+0.3
6,362,008	+		Pf6N2E2_5547	0.35	+1.2
6,362,009	-		Pf6N2E2_5547	0.35	+0.5
6,362,009	-		Pf6N2E2_5547	0.35	+0.1
6,362,009	-		Pf6N2E2_5547	0.35	+2.5
6,362,009	-		Pf6N2E2_5547	0.35	+0.2
6,362,009	-		Pf6N2E2_5547	0.35	+1.2
6,362,034	+		Pf6N2E2_5547	0.37	+1.1
6,362,034	+		Pf6N2E2_5547	0.37	+0.1
6,362,035	-		Pf6N2E2_5547	0.37	+1.4
6,362,035	-		Pf6N2E2_5547	0.37	-0.1
6,362,035	-		Pf6N2E2_5547	0.37	-1.2
6,362,089	+		Pf6N2E2_5547	0.41	+1.7
6,362,089	+		Pf6N2E2_5547	0.41	-0.9
6,362,090	-		Pf6N2E2_5547	0.41	+0.7
6,362,090	-		Pf6N2E2_5547	0.41	+0.7
6,362,122	+		Pf6N2E2_5547	0.43	+0.3
6,362,122	+		Pf6N2E2_5547	0.43	-0.6
6,362,122	+		Pf6N2E2_5547	0.43	+0.9
6,362,122	+		Pf6N2E2_5547	0.43	+0.1
6,362,122	+		Pf6N2E2_5547	0.43	+1.9
6,362,122	+		Pf6N2E2_5547	0.43	-0.1
6,362,123	-		Pf6N2E2_5547	0.43	-0.8
6,362,123	-		Pf6N2E2_5547	0.43	-1.2
6,362,123	-		Pf6N2E2_5547	0.43	-1.9
6,362,123	-		Pf6N2E2_5547	0.43	+1.8
6,362,123	-		Pf6N2E2_5547	0.43	+1.3
6,362,123	-		Pf6N2E2_5547	0.43	+0.7
6,362,123	-		Pf6N2E2_5547	0.43	+0.3
6,362,123	-		Pf6N2E2_5547	0.43	+1.3
6,362,130	+		Pf6N2E2_5547	0.44	-1.4
6,362,130	+		Pf6N2E2_5547	0.44	+1.1
6,362,130	+		Pf6N2E2_5547	0.44	+1.6
6,362,130	+		Pf6N2E2_5547	0.44	+0.7
6,362,131	-		Pf6N2E2_5547	0.44	-0.5
6,362,131	-		Pf6N2E2_5547	0.44	+1.4
6,362,131	-		Pf6N2E2_5547	0.44	+1.2
6,362,175	+		Pf6N2E2_5547	0.47	-0.1
6,362,257	-		Pf6N2E2_5547	0.53	+1.6
6,362,348	+		Pf6N2E2_5547	0.59	+0.7
6,362,349	-		Pf6N2E2_5547	0.59	+1.5
6,362,374	-		Pf6N2E2_5547	0.61	-2.4
6,362,374	-		Pf6N2E2_5547	0.61	-0.1
6,362,374	-		Pf6N2E2_5547	0.61	-0.2
6,362,374	-		Pf6N2E2_5547	0.61	+1.4
6,362,473	+		Pf6N2E2_5547	0.68	-0.1
6,362,474	-		Pf6N2E2_5547	0.68	+1.1
6,362,474	-		Pf6N2E2_5547	0.68	+0.1
6,362,474	-		Pf6N2E2_5547	0.68	+0.4
6,362,474	-		Pf6N2E2_5547	0.68	-0.6
6,362,474	-		Pf6N2E2_5547	0.68	+0.3
6,362,474	-		Pf6N2E2_5547	0.68	-0.4
6,362,474	-		Pf6N2E2_5547	0.68	+0.6
6,362,474	-		Pf6N2E2_5547	0.68	+1.2
6,362,520	+		Pf6N2E2_5547	0.71	+0.1
6,362,695	+		Pf6N2E2_5547	0.83	-1.4
6,362,696	-		Pf6N2E2_5547	0.83	-2.6
6,362,796	-				-1.7
6,362,797	+				-3.2
6,362,797	+				+0.8
6,362,798	-				-0.2
6,362,798	-				+0.6
6,362,798	-				+1.4
6,362,798	-				-0.0
6,362,803	+				+1.1
6,362,803	+				+1.4
6,362,803	+				-0.9
6,362,803	+				-3.0
6,362,803	+				+0.8
6,362,804	-				-1.2
6,362,804	-				+0.7
6,362,804	-				-1.2
6,362,804	-				-0.2
6,362,841	+				+0.5
6,362,867	-				+0.3
6,362,938	+				+1.7
6,362,938	+				+1.2
6,362,939	-				-0.5
6,362,939	-				-0.5
6,362,947	+				-0.5
6,362,970	+				+0.8
6,362,972	+				+0.3
6,362,973	-				+1.6
6,362,973	-				-2.7
6,362,973	-				+0.5
6,362,976	-				-0.4
6,362,995	+				+0.4
6,362,995	+				-0.5
6,362,996	-				+1.1
6,363,009	-				-1.3
6,363,009	-				+0.8
6,363,009	-				+0.1
6,363,009	-				-0.7
6,363,073	+				-1.2
6,363,074	-				+0.7
6,363,074	-				-0.6
6,363,074	-				-1.2
6,363,278	-		Pf6N2E2_5548	0.21	+0.5
6,363,278	-		Pf6N2E2_5548	0.21	-0.6
6,363,512	+		Pf6N2E2_5548	0.40	+1.3
6,363,512	+		Pf6N2E2_5548	0.40	-0.1
6,363,512	+		Pf6N2E2_5548	0.40	+0.2
6,363,512	+		Pf6N2E2_5548	0.40	-1.3
6,363,513	-		Pf6N2E2_5548	0.41	+0.7
6,363,513	-		Pf6N2E2_5548	0.41	+0.6
6,363,513	-		Pf6N2E2_5548	0.41	-1.0
6,363,545	+		Pf6N2E2_5548	0.43	-1.7
6,363,546	-		Pf6N2E2_5548	0.43	+0.5
6,363,546	-		Pf6N2E2_5548	0.43	-0.6
6,363,797	+		Pf6N2E2_5548	0.64	-1.7
6,363,797	+		Pf6N2E2_5548	0.64	-0.5
6,363,797	+		Pf6N2E2_5548	0.64	+1.3
6,363,797	+		Pf6N2E2_5548	0.64	-2.2
6,363,797	+		Pf6N2E2_5548	0.64	-0.8
6,363,797	+		Pf6N2E2_5548	0.64	+0.1
6,363,797	+		Pf6N2E2_5548	0.64	+0.7
6,363,798	-		Pf6N2E2_5548	0.65	-1.0
6,363,798	-		Pf6N2E2_5548	0.65	+1.0
6,363,798	-		Pf6N2E2_5548	0.65	+0.2
6,363,798	-		Pf6N2E2_5548	0.65	+0.1
6,363,929	+		Pf6N2E2_5548	0.76	-1.6
6,363,929	+		Pf6N2E2_5548	0.76	+0.8
6,363,930	-		Pf6N2E2_5548	0.76	-0.1
6,363,930	-		Pf6N2E2_5548	0.76	-1.8