Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3400

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,943,969	-		Pf6N2E2_3399	0.51	-1.1
3,943,969	-		Pf6N2E2_3399	0.51	-0.9
3,944,023	+		Pf6N2E2_3399	0.54	+1.0
3,944,023	+		Pf6N2E2_3399	0.54	-0.9
3,944,024	-		Pf6N2E2_3399	0.54	+1.2
3,944,024	-		Pf6N2E2_3399	0.54	-0.6
3,944,024	-		Pf6N2E2_3399	0.54	+0.8
3,944,024	-		Pf6N2E2_3399	0.54	+0.6
3,944,064	+		Pf6N2E2_3399	0.57	+0.1
3,944,064	+		Pf6N2E2_3399	0.57	-0.7
3,944,064	+		Pf6N2E2_3399	0.57	+0.8
3,944,065	-		Pf6N2E2_3399	0.57	-0.0
3,944,065	-		Pf6N2E2_3399	0.57	-0.2
3,944,065	-		Pf6N2E2_3399	0.57	+0.6
3,944,065	-		Pf6N2E2_3399	0.57	-0.6
3,944,065	-		Pf6N2E2_3399	0.57	+1.0
3,944,065	-		Pf6N2E2_3399	0.57	+0.2
3,944,065	-		Pf6N2E2_3399	0.57	+0.7
3,944,065	-		Pf6N2E2_3399	0.57	+0.8
3,944,097	+		Pf6N2E2_3399	0.59	-0.1
3,944,098	-		Pf6N2E2_3399	0.59	+1.1
3,944,205	+		Pf6N2E2_3399	0.65	+0.5
3,944,205	+		Pf6N2E2_3399	0.65	-0.5
3,944,237	+		Pf6N2E2_3399	0.67	+0.3
3,944,249	+		Pf6N2E2_3399	0.67	-0.5
3,944,249	+		Pf6N2E2_3399	0.67	+0.3
3,944,250	-		Pf6N2E2_3399	0.67	-1.4
3,944,250	-		Pf6N2E2_3399	0.67	+0.8
3,944,326	-		Pf6N2E2_3399	0.72	-0.5
3,944,381	+		Pf6N2E2_3399	0.75	-1.0
3,944,382	-		Pf6N2E2_3399	0.75	-1.3
3,944,382	-		Pf6N2E2_3399	0.75	+0.3
3,944,385	+		Pf6N2E2_3399	0.75	+2.4
3,944,385	+		Pf6N2E2_3399	0.75	-0.6
3,944,385	+		Pf6N2E2_3399	0.75	+1.2
3,944,385	+		Pf6N2E2_3399	0.75	-2.1
3,944,385	+		Pf6N2E2_3399	0.75	-1.7
3,944,386	-		Pf6N2E2_3399	0.75	-0.1
3,944,425	+		Pf6N2E2_3399	0.78	-0.3
3,944,425	+		Pf6N2E2_3399	0.78	+0.2
3,944,425	+		Pf6N2E2_3399	0.78	-0.6
3,944,442	+		Pf6N2E2_3399	0.79	-0.3
3,944,482	+		Pf6N2E2_3399	0.81	+1.0
3,944,482	+		Pf6N2E2_3399	0.81	+0.3
3,944,482	+		Pf6N2E2_3399	0.81	-0.7
3,944,482	+		Pf6N2E2_3399	0.81	-0.3
3,944,483	-		Pf6N2E2_3399	0.81	+0.4
3,944,490	+		Pf6N2E2_3399	0.81	+0.9
3,944,490	+		Pf6N2E2_3399	0.81	-1.3
3,944,490	+		Pf6N2E2_3399	0.81	+0.8
3,944,491	-		Pf6N2E2_3399	0.81	-0.4
3,944,491	-		Pf6N2E2_3399	0.81	+0.4
3,944,491	-		Pf6N2E2_3399	0.81	+0.1
3,944,491	-		Pf6N2E2_3399	0.81	+0.1
3,944,550	+		Pf6N2E2_3399	0.85	+1.2
3,944,550	+		Pf6N2E2_3399	0.85	+0.5
3,944,550	+		Pf6N2E2_3399	0.85	+0.4
3,944,551	-		Pf6N2E2_3399	0.85	-0.1
3,944,641	+		Pf6N2E2_3399	0.90	-0.1
3,944,641	+		Pf6N2E2_3399	0.90	-0.5
3,944,641	+		Pf6N2E2_3399	0.90	-0.1
3,944,641	+		Pf6N2E2_3399	0.90	+0.1
3,944,641	+		Pf6N2E2_3399	0.90	+0.4
3,944,642	-				-0.9
3,944,642	-				+0.3
3,944,642	-				-0.1
3,944,642	-				+0.5
3,944,642	-				+0.6
3,944,642	-				+1.4
3,944,642	-				-0.5
3,944,642	-				-0.0
3,944,642	-				+1.4
3,944,649	+				+0.6
3,944,649	+				+1.5
3,945,030	+		Pf6N2E2_3400	0.27	-0.8
3,945,030	+		Pf6N2E2_3400	0.27	-0.0
3,945,030	+		Pf6N2E2_3400	0.27	+0.8
3,945,030	+		Pf6N2E2_3400	0.27	-2.6
3,945,069	+		Pf6N2E2_3400	0.32	-2.3
3,945,070	-		Pf6N2E2_3400	0.32	+0.9
3,945,107	+		Pf6N2E2_3400	0.36	-1.3
3,945,107	+		Pf6N2E2_3400	0.36	-0.1
3,945,107	+		Pf6N2E2_3400	0.36	-0.3
3,945,107	+		Pf6N2E2_3400	0.36	-0.8
3,945,107	+		Pf6N2E2_3400	0.36	-0.5
3,945,107	+		Pf6N2E2_3400	0.36	-0.9
3,945,108	-		Pf6N2E2_3400	0.37	+0.3
3,945,214	+		Pf6N2E2_3400	0.50	-0.3
3,945,214	+		Pf6N2E2_3400	0.50	+0.5
3,945,223	+		Pf6N2E2_3400	0.51	-0.7
3,945,223	+		Pf6N2E2_3400	0.51	+0.3
3,945,223	+		Pf6N2E2_3400	0.51	-0.7
3,945,224	-		Pf6N2E2_3400	0.51	-1.3
3,945,224	-		Pf6N2E2_3400	0.51	-0.8
3,945,492	-		Pf6N2E2_3400	0.85	-0.4
3,945,492	-		Pf6N2E2_3400	0.85	+1.1
3,945,492	-		Pf6N2E2_3400	0.85	+0.5
3,945,495	+		Pf6N2E2_3400	0.85	-0.0
3,945,528	-		Pf6N2E2_3400	0.89	-1.9
3,945,561	-				+0.8
3,945,578	+				-0.7
3,945,580	+				+0.3
3,945,580	+				+1.5
3,945,581	-				+0.8
3,945,581	-				+1.1
3,945,624	+				+0.7
3,945,625	-				-0.3
3,945,625	-				+0.6
3,945,625	-				-1.6
3,945,632	+				-2.7
3,945,632	+				+0.5
3,945,632	+				+0.1
3,945,632	+				+0.8
3,945,633	-				-0.8
3,945,633	-				-0.2
3,945,633	-				-0.1
3,945,633	-				-0.1
3,945,633	-				-0.6
3,945,710	+				-0.4
3,945,733	+				-0.0
3,945,751	-				+0.0
3,945,751	-				+0.2
3,945,751	-				-1.4
3,945,751	-				+0.3
3,945,751	-				+0.4
3,945,784	-				+0.6
3,945,852	-				-0.7
3,945,994	-				-2.2
3,946,056	+		Pf6N2E2_3401	0.27	-2.5
3,946,056	+		Pf6N2E2_3401	0.27	+0.6
3,946,056	+		Pf6N2E2_3401	0.27	+0.1
3,946,183	+		Pf6N2E2_3401	0.61	+0.6
3,946,183	+		Pf6N2E2_3401	0.61	-0.3
3,946,183	+		Pf6N2E2_3401	0.61	-0.1
3,946,183	+		Pf6N2E2_3401	0.61	-1.4
3,946,183	+		Pf6N2E2_3401	0.61	-0.0
3,946,184	-		Pf6N2E2_3401	0.61	+0.9
3,946,184	-		Pf6N2E2_3401	0.61	+0.7
3,946,184	-		Pf6N2E2_3401	0.61	+0.6
3,946,184	-		Pf6N2E2_3401	0.61	-0.1
3,946,184	-		Pf6N2E2_3401	0.61	-0.6
3,946,256	+		Pf6N2E2_3401	0.81	+0.8
3,946,256	+		Pf6N2E2_3401	0.81	+0.3
3,946,256	+		Pf6N2E2_3401	0.81	+0.8
3,946,256	+		Pf6N2E2_3401	0.81	+1.5
3,946,256	+		Pf6N2E2_3401	0.81	+0.5
3,946,257	-		Pf6N2E2_3401	0.81	+1.5
3,946,257	-		Pf6N2E2_3401	0.81	+1.2
3,946,257	-		Pf6N2E2_3401	0.81	-0.9
3,946,257	-		Pf6N2E2_3401	0.81	+0.0
3,946,333	+				-1.9
3,946,334	-				+1.5
3,946,354	+				+1.2
3,946,355	-				-1.0
3,946,398	-				-0.4
3,946,444	+				-1.3
3,946,444	+				+1.5
3,946,445	-				+0.6
3,946,445	-				+0.3