Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2889

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,376,580	+		Pf6N2E2_2888	0.40	-1.2
3,376,580	+		Pf6N2E2_2888	0.40	-2.5
3,376,580	+		Pf6N2E2_2888	0.40	-1.5
3,376,580	+		Pf6N2E2_2888	0.40	-2.2
3,376,580	+		Pf6N2E2_2888	0.40	-2.0
3,376,580	+		Pf6N2E2_2888	0.40	-2.1
3,376,580	+		Pf6N2E2_2888	0.40	-3.1
3,376,580	+		Pf6N2E2_2888	0.40	-1.3
3,376,580	+		Pf6N2E2_2888	0.40	-3.8
3,376,581	-		Pf6N2E2_2888	0.40	-0.0
3,376,581	-		Pf6N2E2_2888	0.40	-0.7
3,376,581	-		Pf6N2E2_2888	0.40	-2.4
3,376,581	-		Pf6N2E2_2888	0.40	+0.3
3,376,581	-		Pf6N2E2_2888	0.40	-3.5
3,376,581	-		Pf6N2E2_2888	0.40	-1.9
3,376,581	-		Pf6N2E2_2888	0.40	-2.5
3,376,581	-		Pf6N2E2_2888	0.40	-3.6
3,376,581	-		Pf6N2E2_2888	0.40	-2.2
3,376,581	-		Pf6N2E2_2888	0.40	-1.1
3,376,581	-		Pf6N2E2_2888	0.40	-1.1
3,376,595	+		Pf6N2E2_2888	0.41	-1.5
3,376,595	+		Pf6N2E2_2888	0.41	-2.4
3,376,663	-		Pf6N2E2_2888	0.46	-0.6
3,376,739	+		Pf6N2E2_2888	0.52	-0.5
3,376,739	+		Pf6N2E2_2888	0.52	-0.6
3,376,740	-		Pf6N2E2_2888	0.52	-0.9
3,376,740	-		Pf6N2E2_2888	0.52	-1.3
3,376,760	+		Pf6N2E2_2888	0.54	-2.7
3,376,761	-		Pf6N2E2_2888	0.54	-1.0
3,376,761	-		Pf6N2E2_2888	0.54	-2.3
3,376,761	-		Pf6N2E2_2888	0.54	-2.5
3,376,761	-		Pf6N2E2_2888	0.54	-1.3
3,376,799	+		Pf6N2E2_2888	0.56	-0.3
3,376,806	+		Pf6N2E2_2888	0.57	-0.7
3,376,806	+		Pf6N2E2_2888	0.57	-1.7
3,376,806	+		Pf6N2E2_2888	0.57	-1.7
3,376,807	-		Pf6N2E2_2888	0.57	-1.4
3,376,807	-		Pf6N2E2_2888	0.57	-0.9
3,376,899	-		Pf6N2E2_2888	0.64	-0.5
3,376,982	+		Pf6N2E2_2888	0.70	+0.7
3,376,982	+		Pf6N2E2_2888	0.70	-0.5
3,376,983	-		Pf6N2E2_2888	0.70	-1.5
3,377,055	+		Pf6N2E2_2888	0.75	-1.1
3,377,089	-		Pf6N2E2_2888	0.78	-1.2
3,377,358	+				-0.6
3,377,359	-				+1.1
3,377,359	-				-1.4
3,377,359	-				-0.0
3,377,359	-				+1.1
3,377,359	-				-1.5
3,377,370	+				-1.3
3,377,371	-				-0.4
3,377,389	+				-1.0
3,377,389	+				-0.2
3,377,389	+				-1.1
3,377,404	-				-1.9
3,377,404	-				-0.9
3,377,404	-				-0.6
3,377,409	+				-2.1
3,377,410	-				+0.7
3,377,410	-				-0.4
3,377,410	-				+0.4
3,377,412	+				-1.0
3,377,412	+				-1.3
3,377,412	+				-0.1
3,377,412	+				-1.4
3,377,412	+				-0.4
3,377,413	-				-0.3
3,377,413	-				-1.0
3,377,413	-				+0.3
3,377,413	-				-0.2
3,377,423	-				+1.3
3,377,437	-				+0.4
3,377,473	+				+1.0
3,377,474	-				-0.7
3,377,474	-				+0.1
3,377,474	-				-0.7
3,377,609	+				-2.1
3,377,609	+				-2.5
3,377,609	+				-2.7
3,377,609	+				-3.2
3,378,006	+		Pf6N2E2_2889	0.42	-2.7
3,378,006	+		Pf6N2E2_2889	0.42	-1.2
3,378,006	+		Pf6N2E2_2889	0.42	-1.9
3,378,006	+		Pf6N2E2_2889	0.42	-2.7
3,378,006	+		Pf6N2E2_2889	0.42	-0.9
3,378,006	+		Pf6N2E2_2889	0.42	-1.8
3,378,006	+		Pf6N2E2_2889	0.42	-0.5
3,378,006	+		Pf6N2E2_2889	0.42	-1.3
3,378,006	+		Pf6N2E2_2889	0.42	-0.3
3,378,006	+		Pf6N2E2_2889	0.42	-1.0
3,378,007	-		Pf6N2E2_2889	0.42	-1.5
3,378,007	-		Pf6N2E2_2889	0.42	+0.1
3,378,007	-		Pf6N2E2_2889	0.42	-2.7
3,378,007	-		Pf6N2E2_2889	0.42	-3.9
3,378,007	-		Pf6N2E2_2889	0.42	-2.4
3,378,007	-		Pf6N2E2_2889	0.42	-0.1
3,378,007	-		Pf6N2E2_2889	0.42	-2.0
3,378,007	-		Pf6N2E2_2889	0.42	-0.6
3,378,007	-		Pf6N2E2_2889	0.42	-0.1
3,378,007	-		Pf6N2E2_2889	0.42	-1.1
3,378,007	-		Pf6N2E2_2889	0.42	-1.7
3,378,105	+		Pf6N2E2_2889	0.51	-1.4
3,378,105	+		Pf6N2E2_2889	0.51	-2.8
3,378,105	+		Pf6N2E2_2889	0.51	-1.5
3,378,105	+		Pf6N2E2_2889	0.51	-0.8
3,378,106	-		Pf6N2E2_2889	0.51	-1.8
3,378,106	-		Pf6N2E2_2889	0.51	-1.5
3,378,106	-		Pf6N2E2_2889	0.51	-2.2
3,378,207	+		Pf6N2E2_2889	0.60	-2.2
3,378,208	-		Pf6N2E2_2889	0.60	-1.4
3,378,208	-		Pf6N2E2_2889	0.60	-1.0
3,378,420	+		Pf6N2E2_2889	0.78	-0.6
3,378,421	-		Pf6N2E2_2889	0.78	-4.1
3,378,639	+				-2.6
3,378,639	+				-1.5
3,378,639	+				-2.1
3,378,639	+				-0.7
3,378,639	+				-1.9
3,378,639	+				-0.7
3,378,639	+				-2.8
3,378,640	-				-3.4
3,378,640	-				-3.7
3,378,640	-				-3.8
3,378,640	-				-2.1
3,378,640	-				-1.9
3,378,640	-				-1.9
3,378,640	-				-2.1
3,378,640	-				-2.8
3,378,650	+				-1.9
3,378,650	+				-2.1
3,378,650	+				-2.9
3,378,650	+				-1.8
3,378,650	+				-2.9
3,378,650	+				-1.1
3,378,651	-				-0.1
3,378,651	-				-1.3
3,378,680	+				-0.4
3,378,681	-				-1.3
3,378,719	+				-1.1
3,378,719	+				-2.9
3,378,719	+				-1.6
3,378,719	+				-1.6
3,378,719	+				-0.6
3,378,720	-				-1.4
3,378,737	+				-1.4
3,378,737	+				-2.9
3,378,737	+				-1.3
3,378,737	+				-0.3
3,378,737	+				-1.3
3,378,737	+				-1.3
3,378,737	+				-1.4
3,378,738	-				-3.7
3,378,738	-				-0.6
3,378,738	-				-1.1
3,378,791	+		Pf6N2E2_2890	0.13	-3.1
3,378,791	+		Pf6N2E2_2890	0.13	-2.1
3,378,792	-		Pf6N2E2_2890	0.13	-0.5
3,378,792	-		Pf6N2E2_2890	0.13	-2.3
3,378,792	-		Pf6N2E2_2890	0.13	-1.3
3,379,031	+		Pf6N2E2_2890	0.42	-1.5
3,379,031	+		Pf6N2E2_2890	0.42	-1.4
3,379,031	+		Pf6N2E2_2890	0.42	-2.1
3,379,032	-		Pf6N2E2_2890	0.42	-3.2
3,379,032	-		Pf6N2E2_2890	0.42	-1.0
3,379,032	-		Pf6N2E2_2890	0.42	-1.8
3,379,032	-		Pf6N2E2_2890	0.42	-1.2
3,379,032	-		Pf6N2E2_2890	0.42	-2.9
3,379,032	-		Pf6N2E2_2890	0.42	-2.3
3,379,034	+		Pf6N2E2_2890	0.42	-1.5
3,379,035	-		Pf6N2E2_2890	0.42	-3.5
3,379,035	-		Pf6N2E2_2890	0.42	-0.6
3,379,035	-		Pf6N2E2_2890	0.42	-1.7
3,379,035	-		Pf6N2E2_2890	0.42	-1.2
3,379,035	-		Pf6N2E2_2890	0.42	-1.7
3,379,307	+		Pf6N2E2_2890	0.74	-2.8
3,379,442	+				-2.9
3,379,443	-				-0.7
3,379,443	-				-0.9
3,379,451	-				-2.7
3,379,473	-				+0.0
3,379,473	-				-2.1
3,379,518	+				-0.4
3,379,518	+				-2.2
3,379,518	+				-2.3
3,379,518	+				-0.5
3,379,519	-				-1.1
3,379,549	-				-1.4
3,379,549	-				-1.5
3,379,554	+				-0.3
3,379,555	-				-1.7
3,379,555	-				-1.1
3,379,644	+		Pf6N2E2_2891	0.14	-3.1
3,379,644	+		Pf6N2E2_2891	0.14	-2.8
3,379,644	+		Pf6N2E2_2891	0.14	-1.1
3,379,645	-		Pf6N2E2_2891	0.14	-2.1
3,379,645	-		Pf6N2E2_2891	0.14	-1.0
3,379,645	-		Pf6N2E2_2891	0.14	-0.3