Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4195

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
4,880,090	-				+1.3
4,880,208	+				+1.4
4,880,208	+				+1.7
4,880,507	+		Pf6N2E2_4194	0.42	+1.4
4,880,507	+		Pf6N2E2_4194	0.42	+1.8
4,880,508	-		Pf6N2E2_4194	0.43	+1.3
4,880,508	-		Pf6N2E2_4194	0.43	+0.6
4,880,508	-		Pf6N2E2_4194	0.43	+1.0
4,880,508	-		Pf6N2E2_4194	0.43	+1.8
4,880,741	+		Pf6N2E2_4194	0.74	+1.7
4,880,742	-		Pf6N2E2_4194	0.74	+0.8
4,880,742	-		Pf6N2E2_4194	0.74	+0.9
4,880,742	-		Pf6N2E2_4194	0.74	+1.4
4,880,742	-		Pf6N2E2_4194	0.74	+1.5
4,880,747	+		Pf6N2E2_4194	0.75	+0.3
4,880,748	-		Pf6N2E2_4194	0.75	+1.0
4,880,748	-		Pf6N2E2_4194	0.75	+1.9
4,880,803	+		Pf6N2E2_4194	0.83	+0.9
4,880,803	+		Pf6N2E2_4194	0.83	+1.2
4,880,803	+		Pf6N2E2_4194	0.83	+2.1
4,880,803	+		Pf6N2E2_4194	0.83	+0.9
4,880,804	-		Pf6N2E2_4194	0.83	+1.8
4,880,804	-		Pf6N2E2_4194	0.83	+2.2
4,880,804	-		Pf6N2E2_4194	0.83	+0.6
4,880,804	-		Pf6N2E2_4194	0.83	-0.0
4,880,804	-		Pf6N2E2_4194	0.83	+0.9
4,880,804	-		Pf6N2E2_4194	0.83	+1.4
4,880,804	-		Pf6N2E2_4194	0.83	+2.0
4,880,804	-		Pf6N2E2_4194	0.83	+0.8
4,880,807	+		Pf6N2E2_4194	0.83	+0.9
4,880,807	+		Pf6N2E2_4194	0.83	+0.9
4,880,808	-		Pf6N2E2_4194	0.83	+1.5
4,880,808	-		Pf6N2E2_4194	0.83	+1.3
4,880,808	-		Pf6N2E2_4194	0.83	+1.6
4,880,808	-		Pf6N2E2_4194	0.83	+1.3
4,880,867	+				+1.7
4,880,867	+				+2.1
4,880,867	+				+1.5
4,880,927	+				-1.4
4,880,927	+				-1.0
4,880,927	+				+0.3
4,880,927	+				-0.7
4,880,928	-				+0.5
4,880,928	-				+0.4
4,880,931	+				-0.2
4,880,931	+				-2.0
4,880,931	+				+0.6
4,880,931	+				-1.2
4,880,932	-				-0.0
4,880,932	-				+0.1
4,880,932	-				-0.8
4,880,938	+				-1.2
4,880,938	+				-0.4
4,880,939	-				+1.5
4,880,939	-				-1.3
4,880,939	-				+1.8
4,880,939	-				+0.0
4,881,056	+				-0.1
4,881,056	+				-0.2
4,881,057	-				+0.0
4,881,057	-				-1.2
4,881,057	-				-0.5
4,881,110	-				-0.7
4,881,110	-				-0.0
4,881,125	-				+0.2
4,881,231	-		Pf6N2E2_4195	0.12	-0.2
4,881,231	-		Pf6N2E2_4195	0.12	+0.6
4,881,231	-		Pf6N2E2_4195	0.12	+0.7
4,881,330	-		Pf6N2E2_4195	0.19	+0.0
4,881,330	-		Pf6N2E2_4195	0.19	+1.4
4,881,330	-		Pf6N2E2_4195	0.19	+1.2
4,881,330	-		Pf6N2E2_4195	0.19	+1.3
4,881,395	+		Pf6N2E2_4195	0.24	+1.8
4,881,395	+		Pf6N2E2_4195	0.24	+0.7
4,881,395	+		Pf6N2E2_4195	0.24	-1.5
4,881,395	+		Pf6N2E2_4195	0.24	+0.4
4,881,395	+		Pf6N2E2_4195	0.24	-0.3
4,881,395	+		Pf6N2E2_4195	0.24	+1.5
4,881,395	+		Pf6N2E2_4195	0.24	-0.2
4,881,395	+		Pf6N2E2_4195	0.24	-0.2
4,881,395	+		Pf6N2E2_4195	0.24	+0.2
4,881,395	+		Pf6N2E2_4195	0.24	-0.2
4,881,395	+		Pf6N2E2_4195	0.24	-0.2
4,881,395	+		Pf6N2E2_4195	0.24	-0.2
4,881,396	-		Pf6N2E2_4195	0.24	-0.0
4,881,396	-		Pf6N2E2_4195	0.24	-0.5
4,881,396	-		Pf6N2E2_4195	0.24	+1.8
4,881,396	-		Pf6N2E2_4195	0.24	+0.4
4,881,396	-		Pf6N2E2_4195	0.24	+0.2
4,881,396	-		Pf6N2E2_4195	0.24	+1.3
4,881,396	-		Pf6N2E2_4195	0.24	-0.2
4,881,396	-		Pf6N2E2_4195	0.24	-0.7
4,881,396	-		Pf6N2E2_4195	0.24	-1.1
4,881,396	-		Pf6N2E2_4195	0.24	-0.3
4,881,396	-		Pf6N2E2_4195	0.24	-0.4
4,881,396	-		Pf6N2E2_4195	0.24	-1.7
4,881,396	-		Pf6N2E2_4195	0.24	-0.3
4,881,449	+		Pf6N2E2_4195	0.28	-0.5
4,881,449	+		Pf6N2E2_4195	0.28	-0.1
4,881,449	+		Pf6N2E2_4195	0.28	-0.7
4,881,450	-		Pf6N2E2_4195	0.28	+0.6
4,881,450	-		Pf6N2E2_4195	0.28	-0.1
4,881,450	-		Pf6N2E2_4195	0.28	-1.5
4,881,456	+		Pf6N2E2_4195	0.29	-0.7
4,881,457	-		Pf6N2E2_4195	0.29	+0.4
4,881,537	-		Pf6N2E2_4195	0.34	+0.3
4,881,537	-		Pf6N2E2_4195	0.34	+0.5
4,881,537	-		Pf6N2E2_4195	0.34	+0.2
4,881,537	-		Pf6N2E2_4195	0.34	+0.1
4,881,537	-		Pf6N2E2_4195	0.34	-0.4
4,881,635	+		Pf6N2E2_4195	0.41	+1.1
4,881,635	+		Pf6N2E2_4195	0.41	+0.5
4,881,673	+		Pf6N2E2_4195	0.44	+1.9
4,881,674	-		Pf6N2E2_4195	0.44	-1.2
4,881,707	+		Pf6N2E2_4195	0.47	-0.2
4,881,707	+		Pf6N2E2_4195	0.47	-0.2
4,881,707	+		Pf6N2E2_4195	0.47	-0.0
4,881,707	+		Pf6N2E2_4195	0.47	+0.5
4,881,708	-		Pf6N2E2_4195	0.47	+0.4
4,881,708	-		Pf6N2E2_4195	0.47	+0.2
4,881,708	-		Pf6N2E2_4195	0.47	+0.2
4,881,708	-		Pf6N2E2_4195	0.47	+0.4
4,882,160	+		Pf6N2E2_4195	0.79	-0.1
4,882,161	-		Pf6N2E2_4195	0.79	+1.3
4,882,161	-		Pf6N2E2_4195	0.79	-0.2
4,882,211	+		Pf6N2E2_4195	0.83	+0.6
4,882,211	+		Pf6N2E2_4195	0.83	+1.3
4,882,211	+		Pf6N2E2_4195	0.83	-1.4
4,882,211	+		Pf6N2E2_4195	0.83	+0.5
4,882,211	+		Pf6N2E2_4195	0.83	+1.9
4,882,211	+		Pf6N2E2_4195	0.83	-2.5
4,882,211	+		Pf6N2E2_4195	0.83	-2.0
4,882,211	+		Pf6N2E2_4195	0.83	-0.0
4,882,211	+		Pf6N2E2_4195	0.83	-1.3
4,882,211	+		Pf6N2E2_4195	0.83	-0.1
4,882,211	+		Pf6N2E2_4195	0.83	-0.1
4,882,212	-		Pf6N2E2_4195	0.83	+0.4
4,882,212	-		Pf6N2E2_4195	0.83	+0.3
4,882,212	-		Pf6N2E2_4195	0.83	+0.8
4,882,212	-		Pf6N2E2_4195	0.83	-0.5
4,882,212	-		Pf6N2E2_4195	0.83	-0.6
4,882,212	-		Pf6N2E2_4195	0.83	+0.4
4,882,212	-		Pf6N2E2_4195	0.83	-0.2
4,882,212	-		Pf6N2E2_4195	0.83	+1.1
4,882,212	-		Pf6N2E2_4195	0.83	-0.8
4,882,212	-		Pf6N2E2_4195	0.83	+0.4
4,882,212	-		Pf6N2E2_4195	0.83	+0.4
4,882,301	+		Pf6N2E2_4195	0.89	+0.4
4,882,302	-		Pf6N2E2_4195	0.89	+0.7
4,882,302	-		Pf6N2E2_4195	0.89	+0.6
4,882,302	-		Pf6N2E2_4195	0.89	+0.1
4,882,335	+				+1.1
4,882,335	+				+0.9
4,882,384	-				-0.1
4,882,387	+				-0.6
4,882,387	+				+0.6
4,882,387	+				-0.3
4,882,387	+				+1.4
4,882,387	+				-0.4
4,882,387	+				+0.4
4,882,387	+				-1.5
4,882,387	+				-0.0
4,882,387	+				+0.1
4,882,387	+				+0.7
4,882,387	+				+0.2
4,882,387	+				+0.2
4,882,387	+				+0.2
4,882,388	-				+0.1
4,882,388	-				+0.9
4,882,388	-				+0.1
4,882,388	-				+0.7
4,882,388	-				+0.2
4,882,388	-				-0.1
4,882,388	-				-0.2
4,882,388	-				-0.5
4,882,388	-				-0.5
4,882,396	+				-0.1
4,882,396	+				-1.2
4,882,396	+				+0.7
4,882,396	+				+0.5
4,882,396	+				-0.1
4,882,396	+				+0.3
4,882,397	-				+0.6
4,882,397	-				+1.1
4,882,397	-				+0.4
4,882,397	-				+0.3
4,882,459	+				+0.4
4,882,460	-				-0.7
4,882,477	+				-0.7
4,882,477	+				-1.4
4,882,478	-				+0.2
4,882,478	-				+0.1
4,882,478	-				-0.1
4,882,532	-				-0.9
4,882,608	+				-0.4
4,882,647	+				-2.1
4,882,659	+				-1.8
4,882,715	+				+0.6