Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3307

Experiment: Gly-Glu (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu (N)
3,817,771	+		Pf6N2E2_3306	0.55	+2.1
3,817,771	+		Pf6N2E2_3306	0.55	+3.1
3,817,772	-		Pf6N2E2_3306	0.55	-1.0
3,817,862	-		Pf6N2E2_3306	0.61	-0.4
3,817,967	+		Pf6N2E2_3306	0.67	+1.9
3,817,995	+		Pf6N2E2_3306	0.69	+3.1
3,818,009	+		Pf6N2E2_3306	0.70	+4.5
3,818,009	+		Pf6N2E2_3306	0.70	+2.5
3,818,116	+		Pf6N2E2_3306	0.77	+1.8
3,818,116	+		Pf6N2E2_3306	0.77	+2.2
3,818,116	+		Pf6N2E2_3306	0.77	+1.8
3,818,116	+		Pf6N2E2_3306	0.77	+1.9
3,818,116	+		Pf6N2E2_3306	0.77	+2.6
3,818,116	+		Pf6N2E2_3306	0.77	+1.2
3,818,117	-		Pf6N2E2_3306	0.77	+1.8
3,818,117	-		Pf6N2E2_3306	0.77	+1.4
3,818,117	-		Pf6N2E2_3306	0.77	+1.2
3,818,117	-		Pf6N2E2_3306	0.77	+1.5
3,818,117	-		Pf6N2E2_3306	0.77	+1.2
3,818,117	-		Pf6N2E2_3306	0.77	+1.4
3,818,131	+		Pf6N2E2_3306	0.78	+3.1
3,818,131	+		Pf6N2E2_3306	0.78	+2.6
3,818,131	+		Pf6N2E2_3306	0.78	+2.5
3,818,131	+		Pf6N2E2_3306	0.78	+2.3
3,818,131	+		Pf6N2E2_3306	0.78	+2.6
3,818,174	-		Pf6N2E2_3306	0.80	+2.4
3,818,224	+		Pf6N2E2_3306	0.83	+2.5
3,818,224	+		Pf6N2E2_3306	0.83	+2.7
3,818,224	+		Pf6N2E2_3306	0.83	+1.5
3,818,224	+		Pf6N2E2_3306	0.83	+1.9
3,818,225	-		Pf6N2E2_3306	0.83	+1.2
3,818,225	-		Pf6N2E2_3306	0.83	+1.4
3,818,250	+		Pf6N2E2_3306	0.85	+2.8
3,818,250	+		Pf6N2E2_3306	0.85	+2.4
3,818,250	+		Pf6N2E2_3306	0.85	+1.6
3,818,251	-		Pf6N2E2_3306	0.85	+0.6
3,818,251	-		Pf6N2E2_3306	0.85	-0.2
3,818,251	-		Pf6N2E2_3306	0.85	+0.3
3,818,254	+		Pf6N2E2_3306	0.85	+2.1
3,818,254	+		Pf6N2E2_3306	0.85	+1.6
3,818,254	+		Pf6N2E2_3306	0.85	+3.6
3,818,254	+		Pf6N2E2_3306	0.85	+1.3
3,818,255	-		Pf6N2E2_3306	0.85	+1.0
3,818,255	-		Pf6N2E2_3306	0.85	+0.1
3,818,255	-		Pf6N2E2_3306	0.85	+0.9
3,818,255	-		Pf6N2E2_3306	0.85	+1.4
3,818,255	-		Pf6N2E2_3306	0.85	+1.1
3,818,278	+		Pf6N2E2_3306	0.87	+2.3
3,818,278	+		Pf6N2E2_3306	0.87	+2.1
3,818,279	-		Pf6N2E2_3306	0.87	+1.8
3,818,336	+				+1.6
3,818,337	-				+1.3
3,818,337	-				-0.1
3,818,391	+				+0.2
3,818,415	-				+0.0
3,818,467	+				+2.0
3,818,468	-				+0.8
3,818,468	-				+0.0
3,818,488	+				+1.3
3,818,488	+				+1.8
3,818,488	+				+2.0
3,818,489	-				+1.4
3,818,489	-				+0.3
3,818,489	-				+1.5
3,818,489	-				+2.9
3,818,608	-				-1.9
3,818,608	-				-3.3
3,818,613	-				+0.8
3,818,613	-				-3.3
3,818,677	+				+1.7
3,818,677	+				-0.6
3,818,677	+				+0.5
3,818,677	+				+0.3
3,818,677	+				-1.0
3,818,677	+				-0.9
3,818,677	+				+1.1
3,818,677	+				+0.6
3,818,677	+				+1.8
3,818,677	+				-0.4
3,818,677	+				+1.2
3,818,677	+				-0.2
3,818,677	+				-0.2
3,818,678	-				-2.6
3,818,678	-				-2.7
3,818,678	-				-1.9
3,818,678	-				-3.7
3,818,678	-				-2.8
3,818,678	-				-1.6
3,818,678	-				-3.4
3,818,682	-				-0.9
3,818,752	-				-4.1
3,818,752	-				-3.1
3,818,789	+				-2.3
3,818,790	-				-4.2
3,818,790	-				-3.4
3,818,790	-				-2.8
3,818,793	-				-2.3
3,818,823	+				-3.8
3,818,876	-				-2.9
3,818,876	-				-0.5
3,818,986	-		Pf6N2E2_3307	0.15	-2.9
3,819,007	+		Pf6N2E2_3307	0.16	-1.1
3,819,007	+		Pf6N2E2_3307	0.16	-0.4
3,819,008	-		Pf6N2E2_3307	0.16	-3.4
3,819,008	-		Pf6N2E2_3307	0.16	-4.0
3,819,008	-		Pf6N2E2_3307	0.16	-1.7
3,819,008	-		Pf6N2E2_3307	0.16	-2.1
3,819,008	-		Pf6N2E2_3307	0.16	-2.6
3,819,008	-		Pf6N2E2_3307	0.16	-2.8
3,819,008	-		Pf6N2E2_3307	0.16	-2.8
3,819,052	+		Pf6N2E2_3307	0.19	-3.2
3,819,053	-		Pf6N2E2_3307	0.19	-3.2
3,819,053	-		Pf6N2E2_3307	0.19	-2.2
3,819,053	-		Pf6N2E2_3307	0.19	-1.1
3,819,305	-		Pf6N2E2_3307	0.34	-2.6
3,819,412	+		Pf6N2E2_3307	0.41	-2.9
3,819,412	+		Pf6N2E2_3307	0.41	-1.2
3,819,430	+		Pf6N2E2_3307	0.42	-1.4
3,819,431	-		Pf6N2E2_3307	0.42	-3.0
3,819,431	-		Pf6N2E2_3307	0.42	-3.3
3,819,431	-		Pf6N2E2_3307	0.42	+0.1
3,819,619	+		Pf6N2E2_3307	0.54	-1.1
3,819,620	-		Pf6N2E2_3307	0.54	-2.9
3,819,629	-		Pf6N2E2_3307	0.54	-3.6
3,819,743	-		Pf6N2E2_3307	0.61	-1.3
3,819,743	-		Pf6N2E2_3307	0.61	-3.2
3,819,743	-		Pf6N2E2_3307	0.61	+0.2
3,819,823	+		Pf6N2E2_3307	0.66	-1.8
3,819,823	+		Pf6N2E2_3307	0.66	-2.4
3,819,916	+		Pf6N2E2_3307	0.72	-2.8
3,819,917	-		Pf6N2E2_3307	0.72	-2.1
3,819,917	-		Pf6N2E2_3307	0.72	-2.4
3,819,917	-		Pf6N2E2_3307	0.72	-3.2
3,819,997	+		Pf6N2E2_3307	0.77	-2.1
3,819,997	+		Pf6N2E2_3307	0.77	-3.7
3,820,012	+		Pf6N2E2_3307	0.78	-2.0
3,820,012	+		Pf6N2E2_3307	0.78	-1.8
3,820,013	-		Pf6N2E2_3307	0.78	-2.8
3,820,013	-		Pf6N2E2_3307	0.78	-2.9
3,820,219	+				-1.6
3,820,219	+				-3.5
3,820,219	+				-3.6
3,820,219	+				-3.1
3,820,220	-				-1.0
3,820,266	+				-2.2
3,820,266	+				-3.5
3,820,266	+				-3.3
3,820,266	+				-3.3
3,820,267	-				-1.6
3,820,267	-				-1.4
3,820,285	+				+1.2
3,820,285	+				-0.2
3,820,285	+				-2.5
3,820,285	+				-3.2
3,820,285	+				-1.1
3,820,285	+				-0.2
3,820,286	-				-2.7
3,820,286	-				-3.9
3,820,349	-				-3.1
3,820,369	+				+7.8
3,820,369	+				+4.0
3,820,369	+				+1.8
3,820,369	+				+4.3
3,820,369	+				+2.3
3,820,369	+				+3.8
3,820,370	-				-1.2
3,820,370	-				-0.3
3,820,370	-				-3.2
3,820,370	-				-0.9
3,820,370	-				-1.4
3,820,413	-				-2.2
3,820,444	+				+3.8
3,820,444	+				+0.2
3,820,444	+				+0.9
3,820,444	+				+0.4
3,820,444	+				+0.8
3,820,445	-				-2.0
3,820,496	+				+5.5
3,820,521	-				-2.1
3,820,539	+				+5.8
3,820,540	-				-0.5
3,820,557	-				-1.8
3,820,602	+				+9.5
3,820,602	+				+11.5
3,820,603	-				-1.6
3,820,624	-				-0.7
3,820,721	+				+3.8
3,820,722	-				-1.6
3,820,722	-				-2.4
3,820,722	-				-2.5
3,820,760	-				-0.7
3,820,883	+				-0.6
3,820,883	+				-1.2
3,820,883	+				-0.9
3,820,884	-				-2.4
3,820,884	-				-3.1
3,821,012	+		Pf6N2E2_3308	0.16	-2.9
3,821,013	-		Pf6N2E2_3308	0.16	-2.5
3,821,057	+		Pf6N2E2_3308	0.19	-0.8
3,821,057	+		Pf6N2E2_3308	0.19	-1.8
3,821,058	-		Pf6N2E2_3308	0.19	-0.6
3,821,165	+		Pf6N2E2_3308	0.26	-0.8
3,821,166	-		Pf6N2E2_3308	0.26	-1.9
3,821,166	-		Pf6N2E2_3308	0.26	-1.6
3,821,166	-		Pf6N2E2_3308	0.26	-3.8