Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2729

Experiment: Gly-Glu (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu (N)
3,219,135	+		Pf6N2E2_2727	0.89	+1.0
3,219,136	-		Pf6N2E2_2727	0.89	+0.4
3,219,136	-		Pf6N2E2_2727	0.89	+0.5
3,219,140	+		Pf6N2E2_2727	0.90	+0.1
3,219,141	-		Pf6N2E2_2727	0.90	+0.3
3,219,247	-				-0.3
3,219,288	+				-0.1
3,219,288	+				-0.5
3,219,288	+				-0.3
3,219,288	+				+1.4
3,219,288	+				+0.7
3,219,288	+				+0.5
3,219,288	+				-1.9
3,219,288	+				+0.8
3,219,288	+				+1.1
3,219,289	-				+0.2
3,219,289	-				+0.3
3,219,289	-				+1.9
3,219,289	-				-1.8
3,219,289	-				+0.6
3,219,289	-				-0.0
3,219,289	-				+1.0
3,219,289	-				-0.5
3,219,289	-				-1.0
3,219,289	-				-0.5
3,219,289	-				+0.8
3,219,289	-				-1.7
3,219,289	-				-0.9
3,219,290	+				+0.4
3,219,290	+				+1.1
3,219,290	+				-0.1
3,219,290	+				+0.4
3,219,290	+				-0.9
3,219,290	+				-1.1
3,219,290	+				+0.6
3,219,290	+				-0.8
3,219,291	-				+0.4
3,219,291	-				+0.6
3,219,291	-				-1.1
3,219,291	-				-0.6
3,219,291	-				-0.2
3,219,291	-				+0.1
3,219,291	-				-0.0
3,219,291	-				-0.3
3,219,291	-				-0.5
3,219,291	-				-1.9
3,219,291	-				+0.6
3,219,291	-				-0.8
3,219,291	-				-0.5
3,219,293	-				-0.9
3,219,320	+				+0.6
3,219,363	+				+1.1
3,219,363	+				+0.9
3,219,364	-				+0.0
3,219,364	-				-2.0
3,219,364	-				-0.5
3,219,364	-				-0.8
3,219,364	-				-0.3
3,219,369	+				-1.5
3,219,369	+				-0.3
3,219,369	+				+0.8
3,219,369	+				+0.6
3,219,369	+				+0.6
3,219,369	+				-0.7
3,219,370	-				+0.6
3,219,370	-				-2.3
3,219,370	-				-1.2
3,219,370	-				-0.5
3,219,370	-				-1.6
3,219,370	-				-1.3
3,219,370	-				-1.7
3,219,381	+				+0.1
3,219,382	-				-0.6
3,219,402	+				-0.1
3,219,402	+				-0.4
3,219,403	-				-1.6
3,219,403	-				+0.5
3,219,652	+		Pf6N2E2_2728	0.50	-0.5
3,219,652	+		Pf6N2E2_2728	0.50	+0.2
3,219,652	+		Pf6N2E2_2728	0.50	-0.2
3,219,652	+		Pf6N2E2_2728	0.50	-0.3
3,219,652	+		Pf6N2E2_2728	0.50	-0.8
3,219,652	+		Pf6N2E2_2728	0.50	-0.4
3,219,652	+		Pf6N2E2_2728	0.50	-2.6
3,219,652	+		Pf6N2E2_2728	0.50	-0.1
3,219,652	+		Pf6N2E2_2728	0.50	-0.3
3,219,652	+		Pf6N2E2_2728	0.50	+0.1
3,219,653	-		Pf6N2E2_2728	0.50	-0.5
3,219,653	-		Pf6N2E2_2728	0.50	-1.2
3,219,653	-		Pf6N2E2_2728	0.50	-1.6
3,219,653	-		Pf6N2E2_2728	0.50	+0.5
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,653	-		Pf6N2E2_2728	0.50	-1.6
3,219,653	-		Pf6N2E2_2728	0.50	-1.7
3,219,653	-		Pf6N2E2_2728	0.50	-1.3
3,219,890	+				-2.4
3,220,021	+				+1.5
3,220,021	+				-0.1
3,220,021	+				-1.1
3,220,021	+				-0.1
3,220,022	-				+0.1
3,220,022	-				-0.4
3,220,160	+				-0.6
3,220,160	+				-0.7
3,220,160	+				-0.1
3,220,160	+				-0.6
3,220,161	-				-0.2
3,220,161	-				-3.9
3,220,277	+		Pf6N2E2_2729	0.11	-1.8
3,220,278	-		Pf6N2E2_2729	0.11	-0.1
3,220,278	-		Pf6N2E2_2729	0.11	+0.3
3,220,337	+		Pf6N2E2_2729	0.15	-1.1
3,220,337	+		Pf6N2E2_2729	0.15	-0.1
3,220,337	+		Pf6N2E2_2729	0.15	-0.5
3,220,337	+		Pf6N2E2_2729	0.15	+0.7
3,220,337	+		Pf6N2E2_2729	0.15	-1.5
3,220,338	-		Pf6N2E2_2729	0.15	+1.4
3,220,338	-		Pf6N2E2_2729	0.15	-2.1
3,220,338	-		Pf6N2E2_2729	0.15	-0.1
3,220,364	+		Pf6N2E2_2729	0.17	-2.3
3,220,364	+		Pf6N2E2_2729	0.17	+0.6
3,220,364	+		Pf6N2E2_2729	0.17	-0.6
3,220,364	+		Pf6N2E2_2729	0.17	+1.0
3,220,365	-		Pf6N2E2_2729	0.17	+0.1
3,220,365	-		Pf6N2E2_2729	0.17	-0.5
3,220,397	+		Pf6N2E2_2729	0.19	-1.6
3,220,397	+		Pf6N2E2_2729	0.19	-2.9
3,220,397	+		Pf6N2E2_2729	0.19	-2.2
3,220,398	-		Pf6N2E2_2729	0.19	-0.3
3,220,398	-		Pf6N2E2_2729	0.19	-0.1
3,220,398	-		Pf6N2E2_2729	0.19	+0.5
3,220,398	-		Pf6N2E2_2729	0.19	-0.9
3,220,398	-		Pf6N2E2_2729	0.19	-0.2
3,220,472	+		Pf6N2E2_2729	0.23	-1.2
3,220,473	-		Pf6N2E2_2729	0.23	-0.5
3,220,473	-		Pf6N2E2_2729	0.23	+0.5
3,220,587	-		Pf6N2E2_2729	0.30	-0.6
3,220,619	-		Pf6N2E2_2729	0.32	+0.3
3,220,752	+		Pf6N2E2_2729	0.40	+1.2
3,220,753	-		Pf6N2E2_2729	0.40	-1.3
3,220,859	+		Pf6N2E2_2729	0.47	-1.8
3,220,859	+		Pf6N2E2_2729	0.47	-0.6
3,220,859	+		Pf6N2E2_2729	0.47	+0.1
3,220,859	+		Pf6N2E2_2729	0.47	-2.1
3,220,859	+		Pf6N2E2_2729	0.47	-0.5
3,220,860	-		Pf6N2E2_2729	0.47	-0.8
3,220,860	-		Pf6N2E2_2729	0.47	+0.3
3,220,860	-		Pf6N2E2_2729	0.47	-1.4
3,220,860	-		Pf6N2E2_2729	0.47	-0.3
3,220,860	-		Pf6N2E2_2729	0.47	-0.6
3,220,860	-		Pf6N2E2_2729	0.47	+1.0
3,220,860	-		Pf6N2E2_2729	0.47	+0.8
3,220,860	-		Pf6N2E2_2729	0.47	-0.1
3,220,887	+		Pf6N2E2_2729	0.48	+0.1
3,220,887	+		Pf6N2E2_2729	0.48	-1.7
3,220,887	+		Pf6N2E2_2729	0.48	-1.2
3,220,888	-		Pf6N2E2_2729	0.48	-1.6
3,220,888	-		Pf6N2E2_2729	0.48	-2.0
3,220,888	-		Pf6N2E2_2729	0.48	-0.7
3,220,888	-		Pf6N2E2_2729	0.48	-0.5
3,220,888	-		Pf6N2E2_2729	0.48	-1.6
3,220,978	-		Pf6N2E2_2729	0.54	-0.5
3,221,038	+		Pf6N2E2_2729	0.57	-1.6
3,221,165	+		Pf6N2E2_2729	0.65	-2.4
3,221,166	-		Pf6N2E2_2729	0.65	-0.9
3,221,166	-		Pf6N2E2_2729	0.65	-0.8
3,221,166	-		Pf6N2E2_2729	0.65	-0.6
3,221,166	-		Pf6N2E2_2729	0.65	-1.6
3,221,166	-		Pf6N2E2_2729	0.65	-1.8
3,221,232	-		Pf6N2E2_2729	0.69	-0.5
3,221,232	-		Pf6N2E2_2729	0.69	-2.0
3,221,232	-		Pf6N2E2_2729	0.69	-2.1
3,221,289	+		Pf6N2E2_2729	0.73	+0.0
3,221,289	+		Pf6N2E2_2729	0.73	-2.3
3,221,290	-		Pf6N2E2_2729	0.73	-1.1
3,221,290	-		Pf6N2E2_2729	0.73	-1.3
3,221,290	-		Pf6N2E2_2729	0.73	-0.6
3,221,293	+		Pf6N2E2_2729	0.73	-1.4
3,221,293	+		Pf6N2E2_2729	0.73	-0.3
3,221,294	-		Pf6N2E2_2729	0.73	-0.4
3,221,297	-		Pf6N2E2_2729	0.73	+0.8
3,221,461	+		Pf6N2E2_2729	0.83	-1.3
3,221,462	-		Pf6N2E2_2729	0.83	-1.2
3,221,468	+		Pf6N2E2_2729	0.84	+0.9
3,221,512	+		Pf6N2E2_2729	0.86	+0.4
3,221,512	+		Pf6N2E2_2729	0.86	+0.5
3,221,513	-		Pf6N2E2_2729	0.86	-0.6
3,221,772	+				-0.4
3,221,868	-				+0.2
3,221,870	+				-1.7
3,221,870	+				-0.7
3,221,878	+				-1.2
3,221,879	-				+0.6
3,222,035	-				-0.2
3,222,085	-				-0.2
3,222,085	-				-0.5
3,222,085	-				-1.2
3,222,085	-				-0.9
3,222,099	+				-0.1
3,222,100	-				-1.2
3,222,168	+				-0.5
3,222,320	+		Pf6N2E2_2730	0.17	+1.2
3,222,321	-		Pf6N2E2_2730	0.17	+0.7
3,222,363	+		Pf6N2E2_2730	0.20	-1.1
3,222,363	+		Pf6N2E2_2730	0.20	+0.5
3,222,364	-		Pf6N2E2_2730	0.20	-0.4
3,222,364	-				+1.5
3,222,364	-		Pf6N2E2_2730	0.20	+0.4
3,222,364	-		Pf6N2E2_2730	0.20	+0.5
3,222,388	+		Pf6N2E2_2730	0.22	+0.1
3,222,388	+		Pf6N2E2_2730	0.22	-0.8
3,222,389	-		Pf6N2E2_2730	0.22	-1.6
3,222,389	-		Pf6N2E2_2730	0.22	-0.1
3,222,483	+		Pf6N2E2_2730	0.29	+0.3
3,222,483	+		Pf6N2E2_2730	0.29	+0.7
3,222,483	+		Pf6N2E2_2730	0.29	-1.6
3,222,484	-		Pf6N2E2_2730	0.29	+1.1
3,222,484	-		Pf6N2E2_2730	0.29	-0.5
3,222,484	-		Pf6N2E2_2730	0.29	-1.1
3,222,484	-		Pf6N2E2_2730	0.29	-1.3
3,222,484	-		Pf6N2E2_2730	0.29	+1.3