Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_148 and Pf6N2E2_149 are separated by 274 nucleotides Pf6N2E2_149 and Pf6N2E2_150 are separated by 155 nucleotides Pf6N2E2_150 and Pf6N2E2_151 are separated by 2 nucleotides
Pf6N2E2_148 - Membrane fusion component of tripartite multidrug resistance system, at 203,029 to 204,225
_148
Pf6N2E2_149 - Inner membrane component of tripartite multidrug resistance system, at 204,500 to 206,029
_149
Pf6N2E2_150 - UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54), at 206,185 to 206,934
_150
Pf6N2E2_151 - Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8), at 206,937 to 207,440
_151
Position (kb) 204
205
206
207 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 203.676 kb on + strand, within Pf6N2E2_148 at 203.677 kb on - strand, within Pf6N2E2_148 at 203.702 kb on - strand, within Pf6N2E2_148 at 203.863 kb on + strand, within Pf6N2E2_148 at 203.864 kb on - strand, within Pf6N2E2_148 at 203.864 kb on - strand, within Pf6N2E2_148 at 203.881 kb on + strand, within Pf6N2E2_148 at 203.881 kb on + strand, within Pf6N2E2_148 at 203.881 kb on + strand, within Pf6N2E2_148 at 203.882 kb on - strand, within Pf6N2E2_148 at 203.936 kb on + strand, within Pf6N2E2_148 at 204.137 kb on - strand at 204.137 kb on - strand at 204.137 kb on - strand at 204.703 kb on + strand, within Pf6N2E2_149 at 204.790 kb on + strand, within Pf6N2E2_149 at 204.790 kb on + strand, within Pf6N2E2_149 at 204.791 kb on - strand, within Pf6N2E2_149 at 204.828 kb on + strand, within Pf6N2E2_149 at 204.829 kb on - strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.992 kb on + strand, within Pf6N2E2_149 at 204.993 kb on - strand, within Pf6N2E2_149 at 204.993 kb on - strand, within Pf6N2E2_149 at 204.993 kb on - strand, within Pf6N2E2_149 at 205.107 kb on - strand, within Pf6N2E2_149 at 205.107 kb on - strand, within Pf6N2E2_149 at 205.340 kb on + strand, within Pf6N2E2_149 at 205.341 kb on - strand, within Pf6N2E2_149 at 205.478 kb on + strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.479 kb on - strand, within Pf6N2E2_149 at 205.787 kb on + strand, within Pf6N2E2_149 at 205.787 kb on + strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.788 kb on - strand, within Pf6N2E2_149 at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.904 kb on + strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.905 kb on - strand at 205.925 kb on + strand at 205.925 kb on + strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand at 205.926 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 203,676 + Pf6N2E2_148 0.54 -1.5 203,677 - Pf6N2E2_148 0.54 -1.5 203,702 - Pf6N2E2_148 0.56 -1.5 203,863 + Pf6N2E2_148 0.70 -2.4 203,864 - Pf6N2E2_148 0.70 -2.8 203,864 - Pf6N2E2_148 0.70 -3.1 203,881 + Pf6N2E2_148 0.71 -1.1 203,881 + Pf6N2E2_148 0.71 -1.4 203,881 + Pf6N2E2_148 0.71 -2.1 203,882 - Pf6N2E2_148 0.71 -2.1 203,936 + Pf6N2E2_148 0.76 -1.7 204,137 - -2.7 204,137 - -1.5 204,137 - -1.4 204,703 + Pf6N2E2_149 0.13 -1.9 204,790 + Pf6N2E2_149 0.19 +0.1 204,790 + Pf6N2E2_149 0.19 -2.0 204,791 - Pf6N2E2_149 0.19 -0.5 204,828 + Pf6N2E2_149 0.21 -1.5 204,829 - Pf6N2E2_149 0.22 -3.8 204,992 + Pf6N2E2_149 0.32 -2.9 204,992 + Pf6N2E2_149 0.32 -1.4 204,992 + Pf6N2E2_149 0.32 -1.5 204,992 + Pf6N2E2_149 0.32 -1.9 204,992 + Pf6N2E2_149 0.32 +0.0 204,992 + Pf6N2E2_149 0.32 -1.5 204,993 - Pf6N2E2_149 0.32 -1.1 204,993 - Pf6N2E2_149 0.32 -2.4 204,993 - Pf6N2E2_149 0.32 +0.4 205,107 - Pf6N2E2_149 0.40 -1.3 205,107 - Pf6N2E2_149 0.40 -0.7 205,340 + Pf6N2E2_149 0.55 -1.4 205,341 - Pf6N2E2_149 0.55 -2.7 205,478 + Pf6N2E2_149 0.64 -1.1 205,479 - Pf6N2E2_149 0.64 -2.4 205,479 - Pf6N2E2_149 0.64 -1.4 205,479 - Pf6N2E2_149 0.64 -2.7 205,787 + Pf6N2E2_149 0.84 -1.1 205,787 + Pf6N2E2_149 0.84 -1.1 205,788 - Pf6N2E2_149 0.84 -2.2 205,788 - Pf6N2E2_149 0.84 -1.6 205,788 - Pf6N2E2_149 0.84 -1.7 205,904 + -0.5 205,904 + -1.4 205,904 + -1.7 205,904 + -0.5 205,904 + +0.3 205,904 + -0.6 205,904 + -1.7 205,904 + -1.4 205,904 + +1.1 205,904 + -0.8 205,904 + -1.4 205,904 + -0.7 205,904 + -2.6 205,905 - -0.8 205,905 - -0.4 205,905 - -0.6 205,905 - -1.1 205,905 - -3.4 205,905 - -0.3 205,905 - +1.3 205,905 - -2.4 205,905 - -1.1 205,905 - -0.9 205,905 - -1.2 205,905 - -1.6 205,925 + -0.7 205,925 + -1.5 205,926 - -1.3 205,926 - -0.5 205,926 - -2.2 205,926 - -2.5 205,926 - -0.4
Or see this region's nucleotide sequence