Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2167 and Pf6N2E2_2168 are separated by 25 nucleotides Pf6N2E2_2168 and Pf6N2E2_2169 are separated by 48 nucleotides
Pf6N2E2_2167 - hypothetical protein, at 2,572,049 to 2,573,326
_2167
Pf6N2E2_2168 - Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog, at 2,573,352 to 2,573,987
_2168
Pf6N2E2_2169 - Cysteinyl-tRNA synthetase (EC 6.1.1.16), at 2,574,036 to 2,575,406
_2169
Position (kb)
2573
2574 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2572.492 kb on + strand, within Pf6N2E2_2167 at 2572.628 kb on + strand, within Pf6N2E2_2167 at 2572.629 kb on - strand, within Pf6N2E2_2167 at 2572.646 kb on + strand, within Pf6N2E2_2167 at 2572.796 kb on + strand, within Pf6N2E2_2167 at 2572.797 kb on - strand, within Pf6N2E2_2167 at 2572.797 kb on - strand, within Pf6N2E2_2167 at 2572.797 kb on - strand, within Pf6N2E2_2167 at 2572.797 kb on - strand, within Pf6N2E2_2167 at 2572.976 kb on + strand, within Pf6N2E2_2167 at 2572.976 kb on + strand, within Pf6N2E2_2167 at 2572.976 kb on + strand, within Pf6N2E2_2167 at 2572.976 kb on + strand, within Pf6N2E2_2167 at 2572.976 kb on + strand, within Pf6N2E2_2167 at 2572.977 kb on - strand, within Pf6N2E2_2167 at 2572.977 kb on - strand, within Pf6N2E2_2167 at 2572.977 kb on - strand, within Pf6N2E2_2167 at 2572.977 kb on - strand, within Pf6N2E2_2167 at 2572.997 kb on + strand, within Pf6N2E2_2167 at 2572.998 kb on - strand, within Pf6N2E2_2167 at 2572.998 kb on - strand, within Pf6N2E2_2167 at 2573.168 kb on - strand, within Pf6N2E2_2167 at 2573.168 kb on - strand, within Pf6N2E2_2167 at 2573.168 kb on - strand, within Pf6N2E2_2167 at 2573.189 kb on + strand, within Pf6N2E2_2167 at 2573.197 kb on + strand, within Pf6N2E2_2167 at 2573.197 kb on + strand, within Pf6N2E2_2167 at 2573.197 kb on + strand, within Pf6N2E2_2167 at 2573.197 kb on + strand, within Pf6N2E2_2167 at 2573.198 kb on - strand, within Pf6N2E2_2167 at 2573.201 kb on + strand at 2573.201 kb on + strand at 2573.201 kb on + strand at 2573.201 kb on + strand at 2573.202 kb on - strand at 2573.202 kb on - strand at 2573.232 kb on - strand at 2573.232 kb on - strand at 2573.240 kb on + strand at 2573.359 kb on + strand at 2573.359 kb on + strand at 2573.359 kb on + strand at 2573.359 kb on + strand at 2573.359 kb on + strand at 2573.359 kb on + strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.360 kb on - strand at 2573.361 kb on + strand at 2573.361 kb on + strand at 2573.361 kb on + strand at 2573.361 kb on + strand at 2573.362 kb on - strand at 2573.362 kb on - strand at 2573.362 kb on - strand at 2573.362 kb on - strand at 2573.362 kb on - strand at 2573.362 kb on - strand at 2573.445 kb on + strand, within Pf6N2E2_2168 at 2573.865 kb on + strand, within Pf6N2E2_2168 at 2573.865 kb on + strand, within Pf6N2E2_2168 at 2573.866 kb on - strand, within Pf6N2E2_2168 at 2573.866 kb on - strand, within Pf6N2E2_2168 at 2573.901 kb on + strand, within Pf6N2E2_2168 at 2573.902 kb on - strand, within Pf6N2E2_2168 at 2573.902 kb on - strand, within Pf6N2E2_2168 at 2573.902 kb on - strand, within Pf6N2E2_2168 at 2573.902 kb on - strand, within Pf6N2E2_2168 at 2573.966 kb on + strand at 2573.966 kb on + strand at 2573.966 kb on + strand at 2573.966 kb on + strand at 2573.966 kb on + strand at 2573.966 kb on + strand at 2573.967 kb on - strand at 2574.043 kb on + strand at 2574.043 kb on + strand at 2574.043 kb on + strand at 2574.044 kb on - strand at 2574.044 kb on - strand at 2574.044 kb on - strand at 2574.078 kb on - strand at 2574.078 kb on - strand at 2574.108 kb on + strand at 2574.109 kb on - strand at 2574.135 kb on + strand at 2574.136 kb on - strand at 2574.153 kb on - strand at 2574.162 kb on + strand at 2574.162 kb on + strand at 2574.162 kb on + strand at 2574.162 kb on + strand at 2574.162 kb on + strand at 2574.162 kb on + strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.163 kb on - strand at 2574.374 kb on + strand, within Pf6N2E2_2169 at 2574.413 kb on + strand, within Pf6N2E2_2169 at 2574.413 kb on + strand, within Pf6N2E2_2169 at 2574.414 kb on - strand, within Pf6N2E2_2169 at 2574.414 kb on - strand, within Pf6N2E2_2169 at 2574.414 kb on - strand, within Pf6N2E2_2169 at 2574.486 kb on + strand, within Pf6N2E2_2169 at 2574.486 kb on + strand, within Pf6N2E2_2169 at 2574.486 kb on + strand, within Pf6N2E2_2169 at 2574.486 kb on + strand, within Pf6N2E2_2169 at 2574.486 kb on + strand, within Pf6N2E2_2169 at 2574.487 kb on - strand, within Pf6N2E2_2169 at 2574.487 kb on - strand, within Pf6N2E2_2169 at 2574.513 kb on + strand, within Pf6N2E2_2169 at 2574.514 kb on - strand, within Pf6N2E2_2169 at 2574.714 kb on + strand, within Pf6N2E2_2169 at 2574.714 kb on + strand, within Pf6N2E2_2169 at 2574.749 kb on + strand, within Pf6N2E2_2169 at 2574.758 kb on + strand, within Pf6N2E2_2169 at 2574.758 kb on + strand, within Pf6N2E2_2169 at 2574.759 kb on - strand, within Pf6N2E2_2169 at 2574.858 kb on - strand, within Pf6N2E2_2169 at 2574.858 kb on - strand, within Pf6N2E2_2169 at 2574.922 kb on - strand, within Pf6N2E2_2169 at 2574.963 kb on + strand, within Pf6N2E2_2169
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,572,492 + Pf6N2E2_2167 0.35 -0.4 2,572,628 + Pf6N2E2_2167 0.45 +0.2 2,572,629 - Pf6N2E2_2167 0.45 +0.5 2,572,646 + Pf6N2E2_2167 0.47 +0.4 2,572,796 + Pf6N2E2_2167 0.58 -0.5 2,572,797 - Pf6N2E2_2167 0.59 +0.1 2,572,797 - Pf6N2E2_2167 0.59 +0.4 2,572,797 - Pf6N2E2_2167 0.59 -1.6 2,572,797 - Pf6N2E2_2167 0.59 -0.5 2,572,976 + Pf6N2E2_2167 0.73 -0.4 2,572,976 + Pf6N2E2_2167 0.73 +1.2 2,572,976 + Pf6N2E2_2167 0.73 +0.7 2,572,976 + Pf6N2E2_2167 0.73 +1.2 2,572,976 + Pf6N2E2_2167 0.73 +1.1 2,572,977 - Pf6N2E2_2167 0.73 +0.2 2,572,977 - Pf6N2E2_2167 0.73 -0.3 2,572,977 - Pf6N2E2_2167 0.73 -1.3 2,572,977 - Pf6N2E2_2167 0.73 -0.4 2,572,997 + Pf6N2E2_2167 0.74 +0.6 2,572,998 - Pf6N2E2_2167 0.74 -0.4 2,572,998 - Pf6N2E2_2167 0.74 -1.4 2,573,168 - Pf6N2E2_2167 0.88 -0.1 2,573,168 - Pf6N2E2_2167 0.88 -0.3 2,573,168 - Pf6N2E2_2167 0.88 -0.9 2,573,189 + Pf6N2E2_2167 0.89 +0.8 2,573,197 + Pf6N2E2_2167 0.90 -0.1 2,573,197 + Pf6N2E2_2167 0.90 +0.2 2,573,197 + Pf6N2E2_2167 0.90 +0.2 2,573,197 + Pf6N2E2_2167 0.90 -0.2 2,573,198 - Pf6N2E2_2167 0.90 -0.8 2,573,201 + +0.1 2,573,201 + -0.2 2,573,201 + -0.3 2,573,201 + +0.6 2,573,202 - -0.2 2,573,202 - -1.1 2,573,232 - -0.5 2,573,232 - +0.4 2,573,240 + +0.3 2,573,359 + +0.6 2,573,359 + -0.3 2,573,359 + +0.6 2,573,359 + +0.9 2,573,359 + +0.1 2,573,359 + +1.0 2,573,360 - -0.3 2,573,360 - -2.3 2,573,360 - +0.6 2,573,360 - -1.0 2,573,360 - +3.2 2,573,360 - +1.2 2,573,360 - +0.5 2,573,360 - +0.5 2,573,360 - +0.1 2,573,361 + +0.7 2,573,361 + +0.3 2,573,361 + -1.3 2,573,361 + +0.6 2,573,362 - +0.4 2,573,362 - +0.2 2,573,362 - -0.0 2,573,362 - +1.1 2,573,362 - -1.0 2,573,362 - +0.4 2,573,445 + Pf6N2E2_2168 0.15 -0.1 2,573,865 + Pf6N2E2_2168 0.81 +0.5 2,573,865 + Pf6N2E2_2168 0.81 -0.0 2,573,866 - Pf6N2E2_2168 0.81 -0.5 2,573,866 - Pf6N2E2_2168 0.81 -2.1 2,573,901 + Pf6N2E2_2168 0.86 +0.9 2,573,902 - Pf6N2E2_2168 0.86 -0.2 2,573,902 - Pf6N2E2_2168 0.86 +0.3 2,573,902 - Pf6N2E2_2168 0.86 +0.7 2,573,902 - Pf6N2E2_2168 0.86 -0.3 2,573,966 + -0.1 2,573,966 + -0.0 2,573,966 + -0.9 2,573,966 + -0.4 2,573,966 + -0.7 2,573,966 + +1.0 2,573,967 - +0.8 2,574,043 + -1.0 2,574,043 + -0.3 2,574,043 + +0.4 2,574,044 - +0.2 2,574,044 - +0.1 2,574,044 - -0.3 2,574,078 - -0.1 2,574,078 - -0.7 2,574,108 + +0.1 2,574,109 - -0.1 2,574,135 + +0.5 2,574,136 - -0.4 2,574,153 - -0.4 2,574,162 + -1.1 2,574,162 + +0.3 2,574,162 + +0.9 2,574,162 + -1.2 2,574,162 + +0.0 2,574,162 + -0.1 2,574,163 - +0.4 2,574,163 - +0.8 2,574,163 - +1.2 2,574,163 - +0.2 2,574,163 - +1.4 2,574,163 - +0.5 2,574,163 - +0.1 2,574,163 - +1.0 2,574,163 - -0.5 2,574,163 - +0.2 2,574,163 - -0.6 2,574,163 - -0.2 2,574,163 - +0.2 2,574,374 + Pf6N2E2_2169 0.25 +1.6 2,574,413 + Pf6N2E2_2169 0.27 -0.4 2,574,413 + Pf6N2E2_2169 0.27 +0.6 2,574,414 - Pf6N2E2_2169 0.28 +0.1 2,574,414 - Pf6N2E2_2169 0.28 +0.1 2,574,414 - Pf6N2E2_2169 0.28 -0.2 2,574,486 + Pf6N2E2_2169 0.33 -0.2 2,574,486 + Pf6N2E2_2169 0.33 -0.3 2,574,486 + Pf6N2E2_2169 0.33 +0.7 2,574,486 + Pf6N2E2_2169 0.33 -0.1 2,574,486 + Pf6N2E2_2169 0.33 +0.3 2,574,487 - Pf6N2E2_2169 0.33 -0.9 2,574,487 - Pf6N2E2_2169 0.33 -0.0 2,574,513 + Pf6N2E2_2169 0.35 -1.8 2,574,514 - Pf6N2E2_2169 0.35 -1.1 2,574,714 + Pf6N2E2_2169 0.49 +0.5 2,574,714 + Pf6N2E2_2169 0.49 -1.3 2,574,749 + Pf6N2E2_2169 0.52 +0.2 2,574,758 + Pf6N2E2_2169 0.53 -0.3 2,574,758 + Pf6N2E2_2169 0.53 +0.7 2,574,759 - Pf6N2E2_2169 0.53 +0.0 2,574,858 - Pf6N2E2_2169 0.60 +0.6 2,574,858 - Pf6N2E2_2169 0.60 +0.7 2,574,922 - Pf6N2E2_2169 0.65 -2.1 2,574,963 + Pf6N2E2_2169 0.68 +2.2
Or see this region's nucleotide sequence