Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_769 and Pf6N2E2_770 are separated by 322 nucleotides Pf6N2E2_770 and Pf6N2E2_771 overlap by 4 nucleotides Pf6N2E2_771 and Pf6N2E2_772 are separated by 263 nucleotides
Pf6N2E2_769 - Fap unknown function protein, at 880,208 to 880,654
_769
Pf6N2E2_770 - Ribosylnicotinamide kinase (EC 2.7.1.22), at 880,977 to 881,501
_770
Pf6N2E2_771 - Ribosyl nicotinamide transporter, PnuC-like, at 881,498 to 882,061
_771
Pf6N2E2_772 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 882,325 to 883,959
_772
Position (kb) 881
882
883 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 880.883 kb on + strand at 880.884 kb on - strand at 880.973 kb on + strand at 880.973 kb on + strand at 880.974 kb on - strand at 880.974 kb on - strand at 881.189 kb on - strand, within Pf6N2E2_770 at 881.400 kb on + strand, within Pf6N2E2_770 at 881.401 kb on - strand, within Pf6N2E2_770 at 881.404 kb on + strand, within Pf6N2E2_770 at 881.404 kb on + strand, within Pf6N2E2_770 at 881.405 kb on - strand, within Pf6N2E2_770 at 881.405 kb on - strand, within Pf6N2E2_770 at 881.405 kb on - strand, within Pf6N2E2_770 at 881.405 kb on - strand, within Pf6N2E2_770 at 881.568 kb on + strand, within Pf6N2E2_771 at 881.568 kb on + strand, within Pf6N2E2_771 at 881.568 kb on + strand, within Pf6N2E2_771 at 881.569 kb on - strand, within Pf6N2E2_771 at 881.598 kb on + strand, within Pf6N2E2_771 at 881.599 kb on - strand, within Pf6N2E2_771 at 881.877 kb on + strand, within Pf6N2E2_771 at 881.878 kb on - strand, within Pf6N2E2_771 at 881.878 kb on - strand, within Pf6N2E2_771 at 881.896 kb on - strand, within Pf6N2E2_771 at 881.896 kb on - strand, within Pf6N2E2_771 at 881.896 kb on - strand, within Pf6N2E2_771 at 881.922 kb on + strand, within Pf6N2E2_771 at 881.922 kb on + strand, within Pf6N2E2_771 at 881.922 kb on + strand, within Pf6N2E2_771 at 881.952 kb on + strand, within Pf6N2E2_771 at 881.952 kb on + strand, within Pf6N2E2_771 at 881.953 kb on - strand, within Pf6N2E2_771 at 881.953 kb on - strand, within Pf6N2E2_771 at 882.079 kb on + strand at 882.080 kb on - strand at 882.080 kb on - strand at 882.080 kb on - strand at 882.098 kb on + strand at 882.126 kb on - strand at 882.166 kb on + strand at 882.167 kb on - strand at 882.167 kb on - strand at 882.283 kb on + strand at 882.283 kb on + strand at 882.693 kb on + strand, within Pf6N2E2_772 at 882.693 kb on + strand, within Pf6N2E2_772 at 882.694 kb on - strand, within Pf6N2E2_772 at 882.821 kb on - strand, within Pf6N2E2_772 at 882.821 kb on - strand, within Pf6N2E2_772 at 883.022 kb on + strand, within Pf6N2E2_772 at 883.022 kb on + strand, within Pf6N2E2_772 at 883.023 kb on - strand, within Pf6N2E2_772
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 880,883 + -0.4 880,884 - +2.9 880,973 + +0.7 880,973 + +0.5 880,974 - -1.7 880,974 - +0.2 881,189 - Pf6N2E2_770 0.40 -0.2 881,400 + Pf6N2E2_770 0.81 +0.4 881,401 - Pf6N2E2_770 0.81 +1.2 881,404 + Pf6N2E2_770 0.81 -1.1 881,404 + Pf6N2E2_770 0.81 -0.3 881,405 - Pf6N2E2_770 0.82 +0.9 881,405 - Pf6N2E2_770 0.82 +1.8 881,405 - Pf6N2E2_770 0.82 +1.0 881,405 - Pf6N2E2_770 0.82 +0.9 881,568 + Pf6N2E2_771 0.12 -0.2 881,568 + Pf6N2E2_771 0.12 +1.8 881,568 + Pf6N2E2_771 0.12 +1.2 881,569 - Pf6N2E2_771 0.13 -0.4 881,598 + Pf6N2E2_771 0.18 -0.9 881,599 - Pf6N2E2_771 0.18 -0.2 881,877 + Pf6N2E2_771 0.67 +0.2 881,878 - Pf6N2E2_771 0.67 -0.5 881,878 - Pf6N2E2_771 0.67 +0.5 881,896 - Pf6N2E2_771 0.71 +0.4 881,896 - Pf6N2E2_771 0.71 +0.8 881,896 - Pf6N2E2_771 0.71 +0.9 881,922 + Pf6N2E2_771 0.75 +0.4 881,922 + Pf6N2E2_771 0.75 +1.2 881,922 + Pf6N2E2_771 0.75 -0.9 881,952 + Pf6N2E2_771 0.80 -0.8 881,952 + Pf6N2E2_771 0.80 -1.4 881,953 - Pf6N2E2_771 0.81 +1.1 881,953 - Pf6N2E2_771 0.81 +1.2 882,079 + -0.0 882,080 - +0.2 882,080 - +0.3 882,080 - +0.6 882,098 + +0.9 882,126 - -0.4 882,166 + -0.9 882,167 - -1.9 882,167 - +0.6 882,283 + -1.7 882,283 + +0.3 882,693 + Pf6N2E2_772 0.23 -0.9 882,693 + Pf6N2E2_772 0.23 -0.0 882,694 - Pf6N2E2_772 0.23 -0.2 882,821 - Pf6N2E2_772 0.30 +0.1 882,821 - Pf6N2E2_772 0.30 +1.2 883,022 + Pf6N2E2_772 0.43 +1.0 883,022 + Pf6N2E2_772 0.43 -0.5 883,023 - Pf6N2E2_772 0.43 -2.4
Or see this region's nucleotide sequence