Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5858

Experiment: L-Isoleucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5857 and Pf6N2E2_5858 are separated by 196 nucleotidesPf6N2E2_5858 and Pf6N2E2_5859 overlap by 1 nucleotides Pf6N2E2_5857 - Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4), at 6,675,974 to 6,677,419 _5857 Pf6N2E2_5858 - Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5), at 6,677,616 to 6,678,782 _5858 Pf6N2E2_5859 - Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5), at 6,678,782 to 6,679,666 _5859 Position (kb) 6677 6678 6679Strain fitness (log2 ratio) -1 0 1at 6677.417 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (N)
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6,677,417 + +0.6

Or see this region's nucleotide sequence