Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3163 and Pf6N2E2_3164 are separated by 667 nucleotides Pf6N2E2_3164 and Pf6N2E2_3165 are separated by 79 nucleotides
Pf6N2E2_3163 - putative DNA-binding protein, at 3,656,301 to 3,656,825
_3163
Pf6N2E2_3164 - GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2), at 3,657,493 to 3,659,070
_3164
Pf6N2E2_3165 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain, at 3,659,150 to 3,660,619
_3165
Position (kb)
3657
3658
3659
3660 Strain fitness (log2 ratio)
-1
0
1 at 3656.548 kb on - strand, within Pf6N2E2_3163 at 3656.548 kb on - strand, within Pf6N2E2_3163 at 3656.548 kb on - strand, within Pf6N2E2_3163 at 3656.565 kb on + strand, within Pf6N2E2_3163 at 3656.583 kb on + strand, within Pf6N2E2_3163 at 3656.584 kb on - strand, within Pf6N2E2_3163 at 3656.584 kb on - strand, within Pf6N2E2_3163 at 3656.596 kb on - strand, within Pf6N2E2_3163 at 3656.648 kb on + strand, within Pf6N2E2_3163 at 3656.648 kb on + strand, within Pf6N2E2_3163 at 3656.648 kb on + strand, within Pf6N2E2_3163 at 3656.649 kb on - strand, within Pf6N2E2_3163 at 3656.800 kb on + strand at 3656.810 kb on + strand at 3656.811 kb on - strand at 3656.811 kb on - strand at 3656.817 kb on - strand at 3656.831 kb on + strand at 3656.831 kb on + strand at 3656.831 kb on + strand at 3656.831 kb on + strand at 3656.831 kb on + strand at 3656.832 kb on - strand at 3656.832 kb on - strand at 3656.832 kb on - strand at 3656.847 kb on - strand at 3656.847 kb on - strand at 3656.847 kb on - strand at 3656.988 kb on - strand at 3656.996 kb on + strand at 3656.997 kb on - strand at 3657.031 kb on + strand at 3657.031 kb on + strand at 3657.031 kb on + strand at 3657.031 kb on + strand at 3657.032 kb on - strand at 3657.032 kb on - strand at 3657.032 kb on - strand at 3657.032 kb on - strand at 3657.119 kb on + strand at 3657.120 kb on - strand at 3657.269 kb on + strand at 3657.270 kb on - strand at 3657.270 kb on - strand at 3657.270 kb on - strand at 3657.299 kb on + strand at 3657.305 kb on + strand at 3657.346 kb on + strand at 3657.346 kb on + strand at 3657.346 kb on + strand at 3657.346 kb on + strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.347 kb on - strand at 3657.392 kb on + strand at 3657.393 kb on - strand at 3657.418 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,656,548 - Pf6N2E2_3163 0.47 +0.6 3,656,548 - Pf6N2E2_3163 0.47 +0.2 3,656,548 - Pf6N2E2_3163 0.47 +0.5 3,656,565 + Pf6N2E2_3163 0.50 +0.3 3,656,583 + Pf6N2E2_3163 0.54 +0.1 3,656,584 - Pf6N2E2_3163 0.54 -0.1 3,656,584 - Pf6N2E2_3163 0.54 -0.1 3,656,596 - Pf6N2E2_3163 0.56 +0.4 3,656,648 + Pf6N2E2_3163 0.66 -1.1 3,656,648 + Pf6N2E2_3163 0.66 -1.0 3,656,648 + Pf6N2E2_3163 0.66 -1.0 3,656,649 - Pf6N2E2_3163 0.66 +0.1 3,656,800 + -0.5 3,656,810 + -0.5 3,656,811 - +1.3 3,656,811 - +0.8 3,656,817 - +0.4 3,656,831 + -0.2 3,656,831 + +0.1 3,656,831 + -0.6 3,656,831 + +0.3 3,656,831 + +0.6 3,656,832 - +0.3 3,656,832 - +1.6 3,656,832 - -0.7 3,656,847 - +0.6 3,656,847 - +0.3 3,656,847 - -0.2 3,656,988 - -0.5 3,656,996 + +0.2 3,656,997 - -1.1 3,657,031 + +0.1 3,657,031 + +0.7 3,657,031 + +0.4 3,657,031 + +0.1 3,657,032 - +0.7 3,657,032 - +1.4 3,657,032 - +0.1 3,657,032 - -0.4 3,657,119 + -0.6 3,657,120 - +0.2 3,657,269 + +0.8 3,657,270 - +0.9 3,657,270 - +0.1 3,657,270 - -0.2 3,657,299 + -0.4 3,657,305 + +0.1 3,657,346 + -0.4 3,657,346 + -0.1 3,657,346 + -0.1 3,657,346 + -0.4 3,657,347 - -0.3 3,657,347 - +0.4 3,657,347 - -0.8 3,657,347 - -0.1 3,657,347 - -0.5 3,657,347 - -0.9 3,657,347 - +0.3 3,657,347 - -1.1 3,657,347 - -0.5 3,657,392 + -0.6 3,657,393 - +1.2 3,657,418 + -0.7
Or see this region's nucleotide sequence