Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_801 and Pf6N2E2_802 are separated by 342 nucleotides Pf6N2E2_802 and Pf6N2E2_803 are separated by 386 nucleotides Pf6N2E2_803 and Pf6N2E2_804 are separated by 99 nucleotides
Pf6N2E2_801 - Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-), at 931,771 to 932,919
_801
Pf6N2E2_802 - Threonine dehydratase biosynthetic (EC 4.3.1.19), at 933,262 to 934,269
_802
Pf6N2E2_803 - hypothetical protein, at 934,656 to 934,937
_803
Pf6N2E2_804 - Fructokinase (EC 2.7.1.4), at 935,037 to 935,975
_804
Position (kb) 933
934
935 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 932.281 kb on + strand, within Pf6N2E2_801 at 932.282 kb on - strand, within Pf6N2E2_801 at 932.292 kb on + strand, within Pf6N2E2_801 at 932.292 kb on + strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.293 kb on - strand, within Pf6N2E2_801 at 932.365 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.429 kb on + strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.430 kb on - strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.554 kb on + strand, within Pf6N2E2_801 at 932.555 kb on - strand, within Pf6N2E2_801 at 932.587 kb on + strand, within Pf6N2E2_801 at 932.587 kb on + strand, within Pf6N2E2_801 at 932.588 kb on - strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.692 kb on + strand, within Pf6N2E2_801 at 932.860 kb on + strand at 932.860 kb on + strand at 932.861 kb on - strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.866 kb on + strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.867 kb on - strand at 932.899 kb on + strand at 932.899 kb on + strand at 932.899 kb on + strand at 932.917 kb on + strand at 932.958 kb on + strand at 932.978 kb on + strand at 932.978 kb on + strand at 933.072 kb on + strand at 933.073 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.152 kb on - strand at 933.167 kb on + strand at 933.167 kb on + strand at 933.168 kb on - strand at 933.168 kb on - strand at 933.180 kb on - strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.301 kb on + strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.302 kb on - strand at 933.306 kb on + strand at 933.306 kb on + strand at 933.306 kb on + strand at 933.307 kb on - strand at 933.331 kb on + strand at 933.331 kb on + strand at 933.332 kb on - strand at 933.332 kb on - strand at 933.454 kb on + strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.455 kb on - strand, within Pf6N2E2_802 at 933.561 kb on + strand, within Pf6N2E2_802 at 933.562 kb on - strand, within Pf6N2E2_802 at 933.853 kb on + strand, within Pf6N2E2_802 at 933.854 kb on - strand, within Pf6N2E2_802 at 933.854 kb on - strand, within Pf6N2E2_802 at 933.862 kb on + strand, within Pf6N2E2_802 at 933.863 kb on - strand, within Pf6N2E2_802 at 933.878 kb on + strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 933.879 kb on - strand, within Pf6N2E2_802 at 934.086 kb on + strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.087 kb on - strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.090 kb on + strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.091 kb on - strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.153 kb on + strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.154 kb on - strand, within Pf6N2E2_802 at 934.282 kb on + strand at 934.283 kb on - strand at 934.333 kb on - strand at 934.335 kb on + strand at 934.342 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.347 kb on + strand at 934.348 kb on - strand at 934.393 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.440 kb on + strand at 934.542 kb on + strand at 934.572 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.624 kb on + strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.625 kb on - strand at 934.663 kb on + strand at 934.663 kb on + strand at 934.955 kb on + strand at 934.955 kb on + strand at 934.956 kb on - strand at 935.056 kb on + strand at 935.214 kb on - strand, within Pf6N2E2_804
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 932,281 + Pf6N2E2_801 0.44 +0.1 932,282 - Pf6N2E2_801 0.44 -0.2 932,292 + Pf6N2E2_801 0.45 -1.4 932,292 + Pf6N2E2_801 0.45 -2.7 932,293 - Pf6N2E2_801 0.45 -0.6 932,293 - Pf6N2E2_801 0.45 -1.9 932,293 - Pf6N2E2_801 0.45 -0.6 932,365 + Pf6N2E2_801 0.52 -0.2 932,429 + Pf6N2E2_801 0.57 -0.1 932,429 + Pf6N2E2_801 0.57 -0.3 932,429 + Pf6N2E2_801 0.57 -0.6 932,429 + Pf6N2E2_801 0.57 +2.1 932,429 + Pf6N2E2_801 0.57 +0.2 932,429 + Pf6N2E2_801 0.57 +0.9 932,430 - Pf6N2E2_801 0.57 -0.1 932,430 - Pf6N2E2_801 0.57 -0.6 932,430 - Pf6N2E2_801 0.57 -0.5 932,430 - Pf6N2E2_801 0.57 -1.2 932,554 + Pf6N2E2_801 0.68 -2.0 932,554 + Pf6N2E2_801 0.68 -0.1 932,554 + Pf6N2E2_801 0.68 +0.2 932,555 - Pf6N2E2_801 0.68 -0.1 932,587 + Pf6N2E2_801 0.71 -0.9 932,587 + Pf6N2E2_801 0.71 -0.2 932,588 - Pf6N2E2_801 0.71 -0.6 932,692 + Pf6N2E2_801 0.80 -0.7 932,692 + Pf6N2E2_801 0.80 -1.7 932,692 + Pf6N2E2_801 0.80 -0.0 932,860 + -0.6 932,860 + -2.3 932,861 - -0.7 932,866 + -0.7 932,866 + +0.2 932,866 + -1.6 932,866 + +0.2 932,866 + +3.4 932,866 + -2.2 932,867 - -2.9 932,867 - -1.2 932,867 - -1.2 932,867 - -2.1 932,867 - -0.6 932,867 - -1.6 932,867 - +1.0 932,867 - +0.6 932,867 - -1.8 932,867 - -3.3 932,899 + +0.4 932,899 + +0.7 932,899 + -1.9 932,917 + +0.2 932,958 + -2.2 932,978 + +1.4 932,978 + -1.2 933,072 + -0.3 933,073 - -1.4 933,152 - -2.8 933,152 - -1.6 933,152 - -0.8 933,152 - -0.9 933,167 + -2.0 933,167 + -0.4 933,168 - -1.8 933,168 - -1.3 933,180 - -2.7 933,301 + -1.1 933,301 + -1.6 933,301 + -0.8 933,301 + -0.8 933,302 - -0.2 933,302 - -1.2 933,302 - -2.5 933,302 - -2.7 933,302 - -2.3 933,302 - -0.6 933,306 + -1.7 933,306 + -3.1 933,306 + -1.0 933,307 - -1.1 933,331 + -1.9 933,331 + -2.2 933,332 - -2.2 933,332 - -0.9 933,454 + Pf6N2E2_802 0.19 -1.9 933,455 - Pf6N2E2_802 0.19 -3.2 933,455 - Pf6N2E2_802 0.19 -1.6 933,455 - Pf6N2E2_802 0.19 -2.9 933,561 + Pf6N2E2_802 0.30 -2.1 933,562 - Pf6N2E2_802 0.30 -1.6 933,853 + Pf6N2E2_802 0.59 -2.4 933,854 - Pf6N2E2_802 0.59 -1.1 933,854 - Pf6N2E2_802 0.59 +0.2 933,862 + Pf6N2E2_802 0.60 -1.4 933,863 - Pf6N2E2_802 0.60 -2.5 933,878 + Pf6N2E2_802 0.61 -2.2 933,879 - Pf6N2E2_802 0.61 -2.4 933,879 - Pf6N2E2_802 0.61 -0.8 933,879 - Pf6N2E2_802 0.61 -0.9 934,086 + Pf6N2E2_802 0.82 +0.4 934,087 - Pf6N2E2_802 0.82 -1.6 934,087 - Pf6N2E2_802 0.82 -0.8 934,087 - Pf6N2E2_802 0.82 -1.1 934,090 + Pf6N2E2_802 0.82 -0.6 934,090 + Pf6N2E2_802 0.82 -1.4 934,090 + Pf6N2E2_802 0.82 -3.5 934,091 - Pf6N2E2_802 0.82 -0.2 934,091 - Pf6N2E2_802 0.82 -0.6 934,091 - Pf6N2E2_802 0.82 -2.1 934,091 - Pf6N2E2_802 0.82 +1.4 934,091 - Pf6N2E2_802 0.82 -0.8 934,153 + Pf6N2E2_802 0.88 -0.6 934,153 + Pf6N2E2_802 0.88 -2.4 934,153 + Pf6N2E2_802 0.88 -1.4 934,154 - Pf6N2E2_802 0.88 -2.6 934,154 - Pf6N2E2_802 0.88 -0.6 934,282 + -0.9 934,283 - -3.3 934,333 - -0.5 934,335 + -2.7 934,342 + +0.2 934,347 + -1.4 934,347 + -1.5 934,347 + -1.2 934,347 + -2.4 934,347 + -1.3 934,347 + -0.9 934,347 + -1.2 934,348 - +1.6 934,393 + +0.1 934,440 + -0.0 934,440 + -1.8 934,440 + -0.8 934,542 + -1.7 934,572 + +1.4 934,624 + -0.8 934,624 + -0.2 934,624 + -1.5 934,624 + -0.4 934,624 + -0.2 934,624 + +0.1 934,625 - -0.4 934,625 - -0.2 934,625 - -0.9 934,625 - -1.8 934,663 + +0.2 934,663 + -0.2 934,955 + -1.5 934,955 + -0.5 934,956 - -0.4 935,056 + +2.1 935,214 - Pf6N2E2_804 0.19 +2.1
Or see this region's nucleotide sequence