Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4670

Experiment: L-Serine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N)
5,398,555	+				+1.0
5,398,555	+				+1.5
5,398,555	+				-0.4
5,398,555	+				+0.3
5,398,555	+				+1.2
5,398,555	+				-1.5
5,398,555	+				-1.2
5,398,555	+				-1.0
5,398,556	-				+0.1
5,398,556	-				+2.1
5,398,556	-				-0.7
5,398,556	-				-0.1
5,398,556	-				-0.4
5,398,556	-				-2.3
5,398,556	-				+1.0
5,398,556	-				+1.1
5,398,603	+				-1.2
5,398,604	-				-1.7
5,398,604	-				-0.9
5,398,604	-				-1.6
5,398,604	-				-1.6
5,398,632	+				+0.4
5,398,632	+				+0.4
5,398,632	+				-1.4
5,398,632	+				-1.2
5,398,633	-				-0.7
5,398,633	-				-1.2
5,398,633	-				-0.2
5,398,633	-				-0.8
5,398,668	+		Pf6N2E2_4669	0.17	+1.2
5,398,669	-		Pf6N2E2_4669	0.18	+2.0
5,398,672	-		Pf6N2E2_4669	0.18	-0.5
5,398,672	-		Pf6N2E2_4669	0.18	+1.7
5,398,672	-		Pf6N2E2_4669	0.18	-2.1
5,398,672	-		Pf6N2E2_4669	0.18	-1.0
5,398,672	-		Pf6N2E2_4669	0.18	-0.1
5,398,854	+		Pf6N2E2_4669	0.58	+0.8
5,398,854	+		Pf6N2E2_4669	0.58	+1.1
5,398,855	-		Pf6N2E2_4669	0.59	-1.7
5,398,897	+		Pf6N2E2_4669	0.68	+3.3
5,398,976	+		Pf6N2E2_4669	0.85	+2.0
5,398,986	+		Pf6N2E2_4669	0.88	+2.7
5,398,986	+		Pf6N2E2_4669	0.88	+1.8
5,398,986	+		Pf6N2E2_4669	0.88	+2.0
5,398,986	+		Pf6N2E2_4669	0.88	+0.6
5,398,986	+		Pf6N2E2_4669	0.88	+1.7
5,398,987	-		Pf6N2E2_4669	0.88	-0.6
5,398,987	-		Pf6N2E2_4669	0.88	-1.1
5,398,987	-		Pf6N2E2_4669	0.88	-1.7
5,398,987	-		Pf6N2E2_4669	0.88	-0.3
5,398,987	-		Pf6N2E2_4669	0.88	-2.9
5,398,987	-		Pf6N2E2_4669	0.88	-1.4
5,398,987	-		Pf6N2E2_4669	0.88	-1.5
5,399,020	+				-0.2
5,399,020	+				+2.5
5,399,020	+				+2.4
5,399,020	+				+1.5
5,399,021	-				-0.3
5,399,021	-				-0.4
5,399,072	+				+3.4
5,399,075	+				+1.4
5,399,075	+				+2.9
5,399,075	+				+2.3
5,399,075	+				+3.7
5,399,075	+				+3.3
5,399,076	-				-2.6
5,399,076	-				-0.4
5,399,177	+				+2.3
5,399,177	+				+2.5
5,399,177	+				+3.1
5,399,177	+				+2.5
5,399,178	-				-0.1
5,399,216	+				+3.1
5,399,216	+				+3.0
5,399,216	+				+3.6
5,399,216	+				+1.5
5,399,216	+				+3.0
5,399,216	+				+1.2
5,399,216	+				+1.7
5,399,216	+				+1.3
5,399,216	+				+1.4
5,399,216	+				+3.7
5,399,216	+				+3.3
5,399,217	-				-0.1
5,399,217	-				-0.3
5,399,217	-				-1.0
5,399,217	-				+0.8
5,399,217	-				-0.0
5,399,217	-				-1.1
5,399,217	-				-2.4
5,399,217	-				-0.9
5,399,217	-				-2.2
5,399,222	+				+3.0
5,399,223	-				+0.5
5,399,223	-				-0.3
5,399,344	+				+0.3
5,399,352	+				+0.6
5,399,352	+				-0.6
5,399,352	+				-1.5
5,399,352	+				-2.2
5,399,352	+				-3.1
5,399,352	+				-1.6
5,399,352	+				-0.2
5,399,353	-				+0.6
5,399,353	-				-0.8
5,399,353	-				-1.1
5,399,538	+		Pf6N2E2_4670	0.32	-1.5
5,399,539	-		Pf6N2E2_4670	0.32	-0.7
5,399,539	-		Pf6N2E2_4670	0.32	-0.2
5,399,562	+		Pf6N2E2_4670	0.35	-1.1
5,399,562	+		Pf6N2E2_4670	0.35	-1.4
5,399,562	+		Pf6N2E2_4670	0.35	+0.3
5,399,604	+		Pf6N2E2_4670	0.41	-1.1
5,399,604	+		Pf6N2E2_4670	0.41	-0.1
5,399,604	+		Pf6N2E2_4670	0.41	-0.9
5,399,605	-		Pf6N2E2_4670	0.41	+0.1
5,399,682	+		Pf6N2E2_4670	0.52	+0.6
5,399,712	+		Pf6N2E2_4670	0.56	-0.2
5,399,712	+		Pf6N2E2_4670	0.56	-2.6
5,399,762	+		Pf6N2E2_4670	0.62	-0.2
5,399,762	+		Pf6N2E2_4670	0.62	+0.2
5,399,763	-		Pf6N2E2_4670	0.63	-0.3
5,399,763	-		Pf6N2E2_4670	0.63	-1.1
5,399,763	-		Pf6N2E2_4670	0.63	-1.3
5,399,826	+		Pf6N2E2_4670	0.71	-0.4
5,399,826	+		Pf6N2E2_4670	0.71	-1.4
5,399,826	+		Pf6N2E2_4670	0.71	+0.3
5,399,827	-		Pf6N2E2_4670	0.71	-0.6
5,399,827	-		Pf6N2E2_4670	0.71	-1.8
5,399,827	-		Pf6N2E2_4670	0.71	-2.0
5,399,838	+		Pf6N2E2_4670	0.73	-2.0
5,399,841	+		Pf6N2E2_4670	0.73	-0.0
5,399,841	+		Pf6N2E2_4670	0.73	-0.3
5,399,841	+		Pf6N2E2_4670	0.73	+0.4
5,399,842	-		Pf6N2E2_4670	0.73	-2.3
5,399,842	-		Pf6N2E2_4670	0.73	-0.6
5,399,867	-		Pf6N2E2_4670	0.77	+0.5
5,400,006	+				+1.0
5,400,007	-				-0.9
5,400,007	-				-2.2
5,400,007	-				-1.4
5,400,036	+				+1.2
5,400,036	+				-0.1
5,400,037	-				-1.5
5,400,037	-				-1.3
5,400,037	-				+0.5
5,400,066	+				-1.2
5,400,067	-				+0.6
5,400,067	-				+0.3
5,400,105	-				-0.3
5,400,302	+				+0.2
5,400,302	+				+1.4
5,400,302	+				+1.2
5,400,302	+				+0.4
5,400,302	+				-0.4
5,400,303	-				+0.6
5,400,303	-				+0.9
5,400,303	-				+0.6
5,400,427	+		Pf6N2E2_4671	0.14	-2.4
5,400,427	+		Pf6N2E2_4671	0.14	+3.6
5,400,427	+		Pf6N2E2_4671	0.14	-0.5
5,400,428	-		Pf6N2E2_4671	0.14	+1.3
5,400,428	-		Pf6N2E2_4671	0.14	+0.2
5,400,428	-		Pf6N2E2_4671	0.14	-0.1
5,400,468	+		Pf6N2E2_4671	0.16	+0.4
5,400,468	+		Pf6N2E2_4671	0.16	+0.6
5,400,468	+		Pf6N2E2_4671	0.16	-0.7
5,400,468	+		Pf6N2E2_4671	0.16	+0.5
5,400,468	+		Pf6N2E2_4671	0.16	-1.5
5,400,468	+		Pf6N2E2_4671	0.16	+1.3
5,400,469	-		Pf6N2E2_4671	0.16	-0.2
5,400,482	+		Pf6N2E2_4671	0.17	+1.4
5,400,601	+		Pf6N2E2_4671	0.22	+0.3
5,400,602	-		Pf6N2E2_4671	0.22	-0.7
5,400,625	+		Pf6N2E2_4671	0.23	-0.9
5,400,625	+		Pf6N2E2_4671	0.23	-0.4
5,400,625	+		Pf6N2E2_4671	0.23	-0.2
5,400,626	-		Pf6N2E2_4671	0.23	-0.8
5,400,626	-		Pf6N2E2_4671	0.23	+0.6
5,400,647	+		Pf6N2E2_4671	0.24	+0.3
5,400,861	+		Pf6N2E2_4671	0.35	+1.0
5,400,862	-		Pf6N2E2_4671	0.35	+0.6
5,400,991	+		Pf6N2E2_4671	0.41	+0.1
5,400,991	+		Pf6N2E2_4671	0.41	-1.0
5,400,991	+		Pf6N2E2_4671	0.41	-0.0
5,400,991	+		Pf6N2E2_4671	0.41	+1.8
5,400,991	+		Pf6N2E2_4671	0.41	+1.1
5,400,991	+		Pf6N2E2_4671	0.41	-0.0
5,400,992	-		Pf6N2E2_4671	0.41	+0.7
5,400,992	-		Pf6N2E2_4671	0.41	+0.3
5,400,992	-		Pf6N2E2_4671	0.41	-0.6
5,400,992	-		Pf6N2E2_4671	0.41	-0.7
5,401,019	+		Pf6N2E2_4671	0.42	-0.5
5,401,019	+		Pf6N2E2_4671	0.42	-1.0
5,401,020	-		Pf6N2E2_4671	0.42	+1.1
5,401,033	+		Pf6N2E2_4671	0.43	-2.5
5,401,034	-		Pf6N2E2_4671	0.43	+1.6