Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4651 and Pf6N2E2_4652 are separated by 215 nucleotides Pf6N2E2_4652 and Pf6N2E2_4653 are separated by 19 nucleotides
Pf6N2E2_4651 - Putative threonine efflux protein, at 5,381,090 to 5,381,710
_4651
Pf6N2E2_4652 - S-adenosylmethionine synthetase (EC 2.5.1.6), at 5,381,926 to 5,383,116
_4652
Pf6N2E2_4653 - Transcriptional regulator, ArsR family / Methyltransferase fusion, at 5,383,136 to 5,384,131
_4653
Position (kb)
5381
5382
5383
5384 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5381.342 kb on + strand, within Pf6N2E2_4651 at 5381.342 kb on + strand, within Pf6N2E2_4651 at 5381.343 kb on - strand, within Pf6N2E2_4651 at 5381.343 kb on - strand, within Pf6N2E2_4651 at 5381.343 kb on - strand, within Pf6N2E2_4651 at 5381.343 kb on - strand, within Pf6N2E2_4651 at 5381.343 kb on - strand, within Pf6N2E2_4651 at 5381.499 kb on + strand, within Pf6N2E2_4651 at 5381.499 kb on + strand, within Pf6N2E2_4651 at 5381.582 kb on + strand, within Pf6N2E2_4651 at 5381.582 kb on + strand, within Pf6N2E2_4651 at 5381.582 kb on + strand, within Pf6N2E2_4651 at 5381.582 kb on + strand, within Pf6N2E2_4651 at 5381.582 kb on + strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.583 kb on - strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.588 kb on + strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.589 kb on - strand, within Pf6N2E2_4651 at 5381.600 kb on + strand, within Pf6N2E2_4651 at 5381.601 kb on - strand, within Pf6N2E2_4651 at 5381.601 kb on - strand, within Pf6N2E2_4651 at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.708 kb on + strand at 5381.709 kb on - strand at 5381.709 kb on - strand at 5381.774 kb on + strand at 5381.774 kb on + strand at 5381.774 kb on + strand at 5381.774 kb on + strand at 5381.774 kb on + strand at 5381.794 kb on + strand at 5381.794 kb on + strand at 5381.861 kb on - strand at 5381.928 kb on - strand at 5381.928 kb on - strand at 5383.203 kb on - strand at 5383.209 kb on - strand at 5383.209 kb on - strand at 5383.209 kb on - strand at 5383.213 kb on - strand at 5383.213 kb on - strand at 5383.213 kb on - strand at 5383.213 kb on - strand at 5383.213 kb on - strand at 5383.213 kb on - strand at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.332 kb on - strand, within Pf6N2E2_4653 at 5383.431 kb on - strand, within Pf6N2E2_4653 at 5383.431 kb on - strand, within Pf6N2E2_4653 at 5383.493 kb on - strand, within Pf6N2E2_4653 at 5383.650 kb on - strand, within Pf6N2E2_4653 at 5383.650 kb on - strand, within Pf6N2E2_4653 at 5383.650 kb on - strand, within Pf6N2E2_4653 at 5383.650 kb on - strand, within Pf6N2E2_4653 at 5383.650 kb on - strand, within Pf6N2E2_4653 at 5383.779 kb on - strand, within Pf6N2E2_4653 at 5383.779 kb on - strand, within Pf6N2E2_4653 at 5383.779 kb on - strand, within Pf6N2E2_4653 at 5384.040 kb on - strand at 5384.040 kb on - strand at 5384.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 5,381,342 + Pf6N2E2_4651 0.41 -1.3 5,381,342 + Pf6N2E2_4651 0.41 -0.6 5,381,343 - Pf6N2E2_4651 0.41 +1.0 5,381,343 - Pf6N2E2_4651 0.41 +0.4 5,381,343 - Pf6N2E2_4651 0.41 +0.7 5,381,343 - Pf6N2E2_4651 0.41 +1.4 5,381,343 - Pf6N2E2_4651 0.41 +1.6 5,381,499 + Pf6N2E2_4651 0.66 -2.3 5,381,499 + Pf6N2E2_4651 0.66 +0.6 5,381,582 + Pf6N2E2_4651 0.79 +0.8 5,381,582 + Pf6N2E2_4651 0.79 -0.5 5,381,582 + Pf6N2E2_4651 0.79 +0.2 5,381,582 + Pf6N2E2_4651 0.79 +2.7 5,381,582 + Pf6N2E2_4651 0.79 -0.2 5,381,583 - Pf6N2E2_4651 0.79 +0.0 5,381,583 - Pf6N2E2_4651 0.79 -1.1 5,381,583 - Pf6N2E2_4651 0.79 +0.8 5,381,583 - Pf6N2E2_4651 0.79 -0.4 5,381,583 - Pf6N2E2_4651 0.79 -2.6 5,381,583 - Pf6N2E2_4651 0.79 +0.4 5,381,583 - Pf6N2E2_4651 0.79 +1.2 5,381,588 + Pf6N2E2_4651 0.80 +0.6 5,381,588 + Pf6N2E2_4651 0.80 +0.5 5,381,588 + Pf6N2E2_4651 0.80 -1.9 5,381,588 + Pf6N2E2_4651 0.80 +0.8 5,381,588 + Pf6N2E2_4651 0.80 -0.6 5,381,588 + Pf6N2E2_4651 0.80 +0.2 5,381,588 + Pf6N2E2_4651 0.80 +0.6 5,381,588 + Pf6N2E2_4651 0.80 -0.3 5,381,588 + Pf6N2E2_4651 0.80 -0.7 5,381,588 + Pf6N2E2_4651 0.80 -1.3 5,381,588 + Pf6N2E2_4651 0.80 -1.1 5,381,589 - Pf6N2E2_4651 0.80 +1.3 5,381,589 - Pf6N2E2_4651 0.80 -0.3 5,381,589 - Pf6N2E2_4651 0.80 -1.3 5,381,589 - Pf6N2E2_4651 0.80 +0.3 5,381,589 - Pf6N2E2_4651 0.80 +1.3 5,381,589 - Pf6N2E2_4651 0.80 +0.7 5,381,589 - Pf6N2E2_4651 0.80 +1.6 5,381,589 - Pf6N2E2_4651 0.80 +1.0 5,381,589 - Pf6N2E2_4651 0.80 +0.0 5,381,589 - Pf6N2E2_4651 0.80 -0.4 5,381,600 + Pf6N2E2_4651 0.82 -2.4 5,381,601 - Pf6N2E2_4651 0.82 +1.2 5,381,601 - Pf6N2E2_4651 0.82 +0.6 5,381,708 + +0.9 5,381,708 + +0.0 5,381,708 + -0.4 5,381,708 + -0.5 5,381,708 + +0.9 5,381,708 + +1.4 5,381,708 + +1.0 5,381,709 - +1.1 5,381,709 - +0.6 5,381,774 + +0.7 5,381,774 + +0.2 5,381,774 + +0.1 5,381,774 + -1.7 5,381,774 + +1.2 5,381,794 + +2.6 5,381,794 + +0.5 5,381,861 - +0.0 5,381,928 - -0.2 5,381,928 - -0.8 5,383,203 - -0.5 5,383,209 - -1.3 5,383,209 - +0.9 5,383,209 - -1.1 5,383,213 - +1.2 5,383,213 - +0.6 5,383,213 - +0.1 5,383,213 - -0.7 5,383,213 - +0.1 5,383,213 - +2.7 5,383,332 - Pf6N2E2_4653 0.20 -1.7 5,383,332 - Pf6N2E2_4653 0.20 -0.0 5,383,332 - Pf6N2E2_4653 0.20 +0.6 5,383,332 - Pf6N2E2_4653 0.20 -0.8 5,383,332 - Pf6N2E2_4653 0.20 -0.1 5,383,332 - Pf6N2E2_4653 0.20 +0.1 5,383,431 - Pf6N2E2_4653 0.30 -2.4 5,383,431 - Pf6N2E2_4653 0.30 +0.4 5,383,493 - Pf6N2E2_4653 0.36 -0.5 5,383,650 - Pf6N2E2_4653 0.52 -1.3 5,383,650 - Pf6N2E2_4653 0.52 -0.2 5,383,650 - Pf6N2E2_4653 0.52 +1.4 5,383,650 - Pf6N2E2_4653 0.52 +0.8 5,383,650 - Pf6N2E2_4653 0.52 +0.3 5,383,779 - Pf6N2E2_4653 0.65 -1.4 5,383,779 - Pf6N2E2_4653 0.65 +0.1 5,383,779 - Pf6N2E2_4653 0.65 -0.1 5,384,040 - +1.0 5,384,040 - -1.4 5,384,040 - -0.4
Or see this region's nucleotide sequence