Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_43 and Pf6N2E2_44 are separated by 259 nucleotides Pf6N2E2_44 and Pf6N2E2_45 are separated by 177 nucleotides
Pf6N2E2_43 - Histidine permease YuiF, at 81,349 to 82,668
_43
Pf6N2E2_44 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 82,928 to 84,607
_44
Pf6N2E2_45 - Putative protease, at 84,785 to 86,209
_45
Position (kb)
82
83
84
85 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 82.003 kb on + strand, within Pf6N2E2_43 at 82.049 kb on - strand, within Pf6N2E2_43 at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.619 kb on - strand at 82.666 kb on + strand at 82.667 kb on - strand at 82.667 kb on - strand at 82.667 kb on - strand at 82.753 kb on + strand at 82.753 kb on + strand at 82.753 kb on + strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.754 kb on - strand at 82.828 kb on + strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.829 kb on - strand at 82.834 kb on + strand at 82.861 kb on - strand at 82.861 kb on - strand at 82.887 kb on + strand at 82.887 kb on + strand at 82.888 kb on - strand at 82.888 kb on - strand at 82.888 kb on - strand at 82.905 kb on + strand at 82.906 kb on - strand at 82.912 kb on + strand at 82.912 kb on + strand at 82.912 kb on + strand at 82.913 kb on - strand at 82.948 kb on + strand at 83.035 kb on + strand at 83.035 kb on + strand at 83.036 kb on - strand at 83.099 kb on + strand, within Pf6N2E2_44 at 83.100 kb on - strand, within Pf6N2E2_44 at 83.100 kb on - strand, within Pf6N2E2_44 at 83.136 kb on - strand at 83.158 kb on + strand, within Pf6N2E2_44 at 83.204 kb on + strand, within Pf6N2E2_44 at 83.220 kb on - strand, within Pf6N2E2_44 at 83.321 kb on + strand, within Pf6N2E2_44 at 83.321 kb on + strand, within Pf6N2E2_44 at 83.322 kb on - strand, within Pf6N2E2_44 at 83.366 kb on + strand, within Pf6N2E2_44 at 83.367 kb on - strand, within Pf6N2E2_44 at 83.367 kb on - strand, within Pf6N2E2_44 at 83.375 kb on + strand, within Pf6N2E2_44 at 83.375 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.432 kb on + strand, within Pf6N2E2_44 at 83.433 kb on - strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.529 kb on + strand, within Pf6N2E2_44 at 83.530 kb on - strand, within Pf6N2E2_44 at 83.530 kb on - strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.219 kb on + strand, within Pf6N2E2_44 at 84.220 kb on - strand, within Pf6N2E2_44 at 84.220 kb on - strand, within Pf6N2E2_44 at 84.858 kb on + strand at 84.859 kb on - strand at 85.081 kb on - strand, within Pf6N2E2_45 at 85.081 kb on - strand, within Pf6N2E2_45 at 85.081 kb on - strand, within Pf6N2E2_45 at 85.089 kb on + strand, within Pf6N2E2_45 at 85.090 kb on - strand, within Pf6N2E2_45 at 85.239 kb on + strand, within Pf6N2E2_45 at 85.239 kb on + strand, within Pf6N2E2_45 at 85.240 kb on - strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.344 kb on + strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.345 kb on - strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.458 kb on + strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.459 kb on - strand, within Pf6N2E2_45 at 85.483 kb on + strand, within Pf6N2E2_45 at 85.510 kb on - strand, within Pf6N2E2_45 at 85.510 kb on - strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.562 kb on + strand, within Pf6N2E2_45 at 85.593 kb on + strand, within Pf6N2E2_45 at 85.594 kb on - strand, within Pf6N2E2_45
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 82,003 + Pf6N2E2_43 0.50 -0.4 82,049 - Pf6N2E2_43 0.53 -1.5 82,619 - +2.3 82,619 - +1.3 82,619 - +2.0 82,619 - +3.8 82,619 - +0.9 82,666 + -1.2 82,667 - +0.8 82,667 - +1.6 82,667 - +2.1 82,753 + +1.1 82,753 + +2.8 82,753 + +0.9 82,754 - -0.8 82,754 - +1.3 82,754 - -0.9 82,754 - +2.7 82,754 - +0.8 82,828 + +0.2 82,829 - -1.1 82,829 - -0.4 82,829 - -2.7 82,829 - -0.3 82,829 - +1.9 82,829 - -0.8 82,834 + +1.3 82,861 - +2.0 82,861 - -0.1 82,887 + +0.7 82,887 + -0.3 82,888 - +1.3 82,888 - +0.6 82,888 - +0.5 82,905 + -0.9 82,906 - -0.6 82,912 + -0.3 82,912 + -0.0 82,912 + +0.4 82,913 - +1.6 82,948 + -0.4 83,035 + +1.8 83,035 + -0.3 83,036 - -0.0 83,099 + Pf6N2E2_44 0.10 -0.8 83,100 - Pf6N2E2_44 0.10 +1.0 83,100 - Pf6N2E2_44 0.10 -0.4 83,136 - +0.8 83,158 + Pf6N2E2_44 0.14 +1.2 83,204 + Pf6N2E2_44 0.16 +0.1 83,220 - Pf6N2E2_44 0.17 +2.4 83,321 + Pf6N2E2_44 0.23 -0.2 83,321 + Pf6N2E2_44 0.23 +1.3 83,322 - Pf6N2E2_44 0.23 +2.8 83,366 + Pf6N2E2_44 0.26 +0.1 83,367 - Pf6N2E2_44 0.26 +0.4 83,367 - Pf6N2E2_44 0.26 -1.0 83,375 + Pf6N2E2_44 0.27 -0.3 83,375 + Pf6N2E2_44 0.27 +0.3 83,432 + Pf6N2E2_44 0.30 -0.5 83,432 + Pf6N2E2_44 0.30 +0.9 83,432 + Pf6N2E2_44 0.30 -2.1 83,433 - Pf6N2E2_44 0.30 -0.3 83,529 + Pf6N2E2_44 0.36 -0.3 83,529 + Pf6N2E2_44 0.36 -1.5 83,529 + Pf6N2E2_44 0.36 +2.0 83,530 - Pf6N2E2_44 0.36 +1.0 83,530 - Pf6N2E2_44 0.36 +0.2 84,219 + Pf6N2E2_44 0.77 +0.2 84,219 + Pf6N2E2_44 0.77 +0.8 84,219 + Pf6N2E2_44 0.77 -0.2 84,220 - Pf6N2E2_44 0.77 +0.2 84,220 - Pf6N2E2_44 0.77 +0.2 84,858 + -0.2 84,859 - +0.3 85,081 - Pf6N2E2_45 0.21 -1.5 85,081 - Pf6N2E2_45 0.21 +0.2 85,081 - Pf6N2E2_45 0.21 +0.4 85,089 + Pf6N2E2_45 0.21 +0.9 85,090 - Pf6N2E2_45 0.21 +1.2 85,239 + Pf6N2E2_45 0.32 -2.2 85,239 + Pf6N2E2_45 0.32 +1.2 85,240 - Pf6N2E2_45 0.32 +0.6 85,344 + Pf6N2E2_45 0.39 -1.2 85,344 + Pf6N2E2_45 0.39 +0.6 85,344 + Pf6N2E2_45 0.39 +0.2 85,344 + Pf6N2E2_45 0.39 -0.5 85,344 + Pf6N2E2_45 0.39 -0.2 85,344 + Pf6N2E2_45 0.39 +0.8 85,344 + Pf6N2E2_45 0.39 +0.0 85,345 - Pf6N2E2_45 0.39 +1.2 85,345 - Pf6N2E2_45 0.39 +0.8 85,345 - Pf6N2E2_45 0.39 +0.8 85,345 - Pf6N2E2_45 0.39 -1.0 85,345 - Pf6N2E2_45 0.39 -0.8 85,345 - Pf6N2E2_45 0.39 +0.2 85,458 + Pf6N2E2_45 0.47 +1.4 85,458 + Pf6N2E2_45 0.47 -1.2 85,458 + Pf6N2E2_45 0.47 +0.1 85,459 - Pf6N2E2_45 0.47 +0.3 85,459 - Pf6N2E2_45 0.47 -0.2 85,459 - Pf6N2E2_45 0.47 +0.4 85,459 - Pf6N2E2_45 0.47 -0.4 85,459 - Pf6N2E2_45 0.47 -0.0 85,483 + Pf6N2E2_45 0.49 +0.9 85,510 - Pf6N2E2_45 0.51 -1.4 85,510 - Pf6N2E2_45 0.51 +2.0 85,562 + Pf6N2E2_45 0.55 +1.7 85,562 + Pf6N2E2_45 0.55 -0.5 85,562 + Pf6N2E2_45 0.55 +2.0 85,593 + Pf6N2E2_45 0.57 +1.1 85,594 - Pf6N2E2_45 0.57 -0.9
Or see this region's nucleotide sequence