Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_422 and Pf6N2E2_423 are separated by 20 nucleotides Pf6N2E2_423 and Pf6N2E2_424 are separated by 129 nucleotides Pf6N2E2_424 and Pf6N2E2_425 are separated by 217 nucleotides Pf6N2E2_425 and Pf6N2E2_426 are separated by 4 nucleotides
Pf6N2E2_422 - Na+ driven multidrug efflux pump, at 490,565 to 491,863
_422
Pf6N2E2_423 - Putative phosphatase YfbT, at 491,884 to 492,588
_423
Pf6N2E2_424 - Decarboxylase family protein, at 492,718 to 494,091
_424
Pf6N2E2_425 - FIG00957304: hypothetical protein, at 494,309 to 494,842
_425
Pf6N2E2_426 - Arsenate reductase (EC 1.20.4.1), at 494,847 to 495,302
_426
Position (kb) 492
493
494
495 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 491.729 kb on + strand, within Pf6N2E2_422 at 491.730 kb on - strand, within Pf6N2E2_422 at 491.786 kb on + strand at 491.787 kb on - strand at 491.817 kb on - strand at 491.819 kb on + strand at 491.820 kb on - strand at 491.861 kb on + strand at 491.877 kb on + strand at 491.877 kb on + strand at 491.877 kb on + strand at 491.877 kb on + strand at 491.878 kb on - strand at 491.878 kb on - strand at 491.878 kb on - strand at 491.878 kb on - strand at 492.279 kb on + strand, within Pf6N2E2_423 at 492.486 kb on + strand, within Pf6N2E2_423 at 492.526 kb on + strand at 492.526 kb on + strand at 492.527 kb on - strand at 492.527 kb on - strand at 492.527 kb on - strand at 492.584 kb on + strand at 492.584 kb on + strand at 492.585 kb on - strand at 492.585 kb on - strand at 492.585 kb on - strand at 492.585 kb on - strand at 492.660 kb on + strand at 492.714 kb on + strand at 492.715 kb on - strand at 492.746 kb on + strand at 492.746 kb on + strand at 492.747 kb on - strand at 492.747 kb on - strand at 492.747 kb on - strand at 492.747 kb on - strand at 493.143 kb on - strand, within Pf6N2E2_424 at 493.143 kb on - strand, within Pf6N2E2_424 at 493.348 kb on + strand, within Pf6N2E2_424 at 493.348 kb on + strand, within Pf6N2E2_424 at 493.349 kb on - strand, within Pf6N2E2_424 at 493.470 kb on + strand, within Pf6N2E2_424 at 493.471 kb on - strand, within Pf6N2E2_424 at 493.545 kb on + strand, within Pf6N2E2_424 at 493.546 kb on - strand, within Pf6N2E2_424 at 493.589 kb on + strand, within Pf6N2E2_424 at 493.590 kb on - strand, within Pf6N2E2_424 at 493.590 kb on - strand, within Pf6N2E2_424 at 493.590 kb on - strand, within Pf6N2E2_424 at 493.595 kb on + strand, within Pf6N2E2_424 at 493.595 kb on + strand, within Pf6N2E2_424 at 493.595 kb on + strand, within Pf6N2E2_424 at 493.694 kb on + strand, within Pf6N2E2_424 at 493.695 kb on - strand, within Pf6N2E2_424 at 493.695 kb on - strand, within Pf6N2E2_424 at 493.901 kb on + strand, within Pf6N2E2_424 at 493.902 kb on - strand, within Pf6N2E2_424 at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.982 kb on + strand at 493.983 kb on - strand at 493.983 kb on - strand at 493.986 kb on + strand at 494.074 kb on + strand at 494.074 kb on + strand at 494.074 kb on + strand at 494.074 kb on + strand at 494.074 kb on + strand at 494.074 kb on + strand at 494.075 kb on - strand at 494.075 kb on - strand at 494.075 kb on - strand at 494.241 kb on + strand at 494.241 kb on + strand at 494.241 kb on + strand at 494.242 kb on - strand at 494.245 kb on + strand at 494.245 kb on + strand at 494.245 kb on + strand at 494.245 kb on + strand at 494.245 kb on + strand at 494.245 kb on + strand at 494.246 kb on - strand at 494.246 kb on - strand at 494.246 kb on - strand at 494.246 kb on - strand at 494.246 kb on - strand at 494.289 kb on + strand at 494.289 kb on + strand at 494.290 kb on - strand at 494.290 kb on - strand at 494.290 kb on - strand at 494.342 kb on + strand at 494.343 kb on - strand at 494.343 kb on - strand at 494.343 kb on - strand at 494.519 kb on + strand, within Pf6N2E2_425 at 494.520 kb on - strand, within Pf6N2E2_425 at 494.555 kb on + strand, within Pf6N2E2_425 at 494.664 kb on - strand, within Pf6N2E2_425 at 494.664 kb on - strand, within Pf6N2E2_425 at 494.828 kb on + strand at 495.046 kb on + strand, within Pf6N2E2_426 at 495.047 kb on - strand, within Pf6N2E2_426 at 495.047 kb on - strand, within Pf6N2E2_426 at 495.047 kb on - strand, within Pf6N2E2_426
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 491,729 + Pf6N2E2_422 0.90 -1.9 491,730 - Pf6N2E2_422 0.90 +1.0 491,786 + -0.5 491,787 - +2.4 491,817 - -0.6 491,819 + -0.5 491,820 - +0.5 491,861 + -1.9 491,877 + +1.9 491,877 + +0.1 491,877 + +0.7 491,877 + +0.3 491,878 - +0.5 491,878 - -1.9 491,878 - -0.0 491,878 - -0.0 492,279 + Pf6N2E2_423 0.56 +0.8 492,486 + Pf6N2E2_423 0.85 +0.5 492,526 + +0.5 492,526 + +1.5 492,527 - -0.2 492,527 - -0.4 492,527 - +0.5 492,584 + +0.4 492,584 + +1.5 492,585 - +2.1 492,585 - +1.0 492,585 - +0.3 492,585 - -0.9 492,660 + -0.5 492,714 + +0.5 492,715 - -1.2 492,746 + -0.2 492,746 + -0.6 492,747 - -1.5 492,747 - -1.0 492,747 - -1.8 492,747 - -1.4 493,143 - Pf6N2E2_424 0.31 -0.2 493,143 - Pf6N2E2_424 0.31 -0.3 493,348 + Pf6N2E2_424 0.46 -0.6 493,348 + Pf6N2E2_424 0.46 -0.3 493,349 - Pf6N2E2_424 0.46 -1.5 493,470 + Pf6N2E2_424 0.55 -1.0 493,471 - Pf6N2E2_424 0.55 -1.3 493,545 + Pf6N2E2_424 0.60 -0.8 493,546 - Pf6N2E2_424 0.60 +0.8 493,589 + Pf6N2E2_424 0.63 -1.8 493,590 - Pf6N2E2_424 0.63 -0.3 493,590 - Pf6N2E2_424 0.63 -2.4 493,590 - Pf6N2E2_424 0.63 +1.2 493,595 + Pf6N2E2_424 0.64 -2.3 493,595 + Pf6N2E2_424 0.64 -0.8 493,595 + Pf6N2E2_424 0.64 -3.2 493,694 + Pf6N2E2_424 0.71 -0.8 493,695 - Pf6N2E2_424 0.71 -1.5 493,695 - Pf6N2E2_424 0.71 +1.5 493,901 + Pf6N2E2_424 0.86 -1.8 493,902 - Pf6N2E2_424 0.86 -1.6 493,982 + -0.0 493,982 + -1.3 493,982 + -0.6 493,982 + -1.3 493,982 + -1.6 493,982 + -0.6 493,982 + -1.0 493,982 + +0.1 493,982 + +0.5 493,983 - +2.5 493,983 - -1.5 493,986 + +0.3 494,074 + -0.5 494,074 + -0.8 494,074 + +2.0 494,074 + -1.9 494,074 + -1.5 494,074 + -0.5 494,075 - -1.7 494,075 - +1.1 494,075 - -0.8 494,241 + +2.6 494,241 + -0.8 494,241 + +1.7 494,242 - -1.8 494,245 + +0.9 494,245 + -1.4 494,245 + +1.4 494,245 + -2.3 494,245 + -1.8 494,245 + +1.3 494,246 - -2.0 494,246 - -0.8 494,246 - +0.6 494,246 - -0.5 494,246 - -0.2 494,289 + -2.3 494,289 + -0.3 494,290 - -0.8 494,290 - -0.3 494,290 - +0.3 494,342 + +1.4 494,343 - +0.1 494,343 - -1.9 494,343 - +0.9 494,519 + Pf6N2E2_425 0.39 +0.8 494,520 - Pf6N2E2_425 0.40 +0.9 494,555 + Pf6N2E2_425 0.46 +2.5 494,664 - Pf6N2E2_425 0.66 +0.7 494,664 - Pf6N2E2_425 0.66 +0.1 494,828 + -1.3 495,046 + Pf6N2E2_426 0.44 +0.7 495,047 - Pf6N2E2_426 0.44 -0.0 495,047 - Pf6N2E2_426 0.44 -1.1 495,047 - Pf6N2E2_426 0.44 -0.8
Or see this region's nucleotide sequence