Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_126 and Pf6N2E2_127 are separated by 699 nucleotides Pf6N2E2_127 and Pf6N2E2_128 overlap by 1 nucleotides
Pf6N2E2_126 - FIG00960892: hypothetical protein, at 174,048 to 175,745
_126
Pf6N2E2_127 - AttE component of AttEFGH ABC transport system, at 176,445 to 177,113
_127
Pf6N2E2_128 - AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system, at 177,113 to 179,581
_128
Position (kb) 176
177
178 Strain fitness (log2 ratio) -2
-1
0
1
2 at 175.527 kb on + strand, within Pf6N2E2_126 at 175.527 kb on + strand, within Pf6N2E2_126 at 175.527 kb on + strand, within Pf6N2E2_126 at 175.528 kb on - strand, within Pf6N2E2_126 at 175.528 kb on - strand, within Pf6N2E2_126 at 175.528 kb on - strand, within Pf6N2E2_126 at 175.528 kb on - strand, within Pf6N2E2_126 at 175.591 kb on - strand at 175.638 kb on + strand at 175.821 kb on + strand at 175.821 kb on + strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 175.822 kb on - strand at 176.036 kb on + strand at 176.036 kb on + strand at 176.037 kb on - strand at 176.037 kb on - strand at 176.046 kb on + strand at 176.046 kb on + strand at 176.046 kb on + strand at 176.046 kb on + strand at 176.046 kb on + strand at 176.047 kb on - strand at 176.047 kb on - strand at 176.051 kb on + strand at 176.051 kb on + strand at 176.336 kb on + strand at 176.336 kb on + strand at 176.336 kb on + strand at 176.337 kb on - strand at 176.337 kb on - strand at 176.337 kb on - strand at 176.337 kb on - strand at 176.359 kb on - strand at 176.359 kb on - strand at 176.359 kb on - strand at 176.359 kb on - strand at 176.376 kb on + strand at 176.377 kb on - strand at 176.377 kb on - strand at 176.812 kb on + strand, within Pf6N2E2_127 at 176.986 kb on + strand, within Pf6N2E2_127 at 177.074 kb on - strand at 177.074 kb on - strand at 177.257 kb on + strand at 177.258 kb on - strand at 177.258 kb on - strand at 177.518 kb on - strand, within Pf6N2E2_128 at 177.684 kb on + strand, within Pf6N2E2_128
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 175,527 + Pf6N2E2_126 0.87 +1.8 175,527 + Pf6N2E2_126 0.87 -1.2 175,527 + Pf6N2E2_126 0.87 +0.4 175,528 - Pf6N2E2_126 0.87 +0.8 175,528 - Pf6N2E2_126 0.87 +0.1 175,528 - Pf6N2E2_126 0.87 -0.5 175,528 - Pf6N2E2_126 0.87 -1.2 175,591 - -1.8 175,638 + -1.0 175,821 + +0.3 175,821 + -1.2 175,822 - -0.2 175,822 - +2.1 175,822 - -0.8 175,822 - -0.2 175,822 - -0.3 175,822 - +1.2 175,822 - -0.7 175,822 - -0.6 176,036 + +1.1 176,036 + -0.3 176,037 - +0.1 176,037 - -0.2 176,046 + -0.5 176,046 + +0.3 176,046 + -1.1 176,046 + +0.2 176,046 + +0.0 176,047 - -2.0 176,047 - +0.5 176,051 + -0.1 176,051 + +0.6 176,336 + -0.8 176,336 + +0.8 176,336 + -1.5 176,337 - -0.5 176,337 - +0.1 176,337 - -0.2 176,337 - +0.6 176,359 - +1.0 176,359 - -0.8 176,359 - -1.8 176,359 - +0.6 176,376 + -1.9 176,377 - +0.4 176,377 - -2.0 176,812 + Pf6N2E2_127 0.55 -1.1 176,986 + Pf6N2E2_127 0.81 -2.2 177,074 - +0.6 177,074 - +0.9 177,257 + -0.1 177,258 - +1.1 177,258 - -1.4 177,518 - Pf6N2E2_128 0.16 +0.2 177,684 + Pf6N2E2_128 0.23 -0.5
Or see this region's nucleotide sequence