Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2061 and Pf6N2E2_2062 are separated by 834 nucleotides Pf6N2E2_2062 and Pf6N2E2_2063 are separated by 11 nucleotides Pf6N2E2_2063 and Pf6N2E2_2064 are separated by 11 nucleotides
Pf6N2E2_2061 - CobW GTPase involved in cobalt insertion for B12 biosynthesis, at 2,453,260 to 2,454,324
_2061
Pf6N2E2_2062 - FIG00955561: hypothetical protein, at 2,455,159 to 2,455,347
_2062
Pf6N2E2_2063 - Predicted cobalt transporter CbtA, at 2,455,359 to 2,456,054
_2063
Pf6N2E2_2064 - Cobalt-precorrin-3b C17-methyltransferase, at 2,456,066 to 2,456,455
_2064
Position (kb)
2455
2456 Strain fitness (log2 ratio)
-2
-1
0
1 at 2454.422 kb on - strand at 2454.422 kb on - strand at 2454.422 kb on - strand at 2454.422 kb on - strand at 2454.510 kb on + strand at 2454.511 kb on - strand at 2454.595 kb on + strand at 2454.595 kb on + strand at 2454.596 kb on - strand at 2454.596 kb on - strand at 2454.635 kb on + strand at 2454.636 kb on - strand at 2454.670 kb on + strand at 2454.670 kb on + strand at 2454.670 kb on + strand at 2454.671 kb on - strand at 2454.671 kb on - strand at 2454.671 kb on - strand at 2454.671 kb on - strand at 2454.671 kb on - strand at 2454.671 kb on - strand at 2454.739 kb on + strand at 2454.739 kb on + strand at 2454.805 kb on + strand at 2454.805 kb on + strand at 2454.805 kb on + strand at 2454.805 kb on + strand at 2454.805 kb on + strand at 2454.805 kb on + strand at 2454.806 kb on - strand at 2454.806 kb on - strand at 2454.806 kb on - strand at 2454.806 kb on - strand at 2454.846 kb on + strand at 2454.846 kb on + strand at 2454.851 kb on - strand at 2454.900 kb on + strand at 2454.901 kb on - strand at 2455.194 kb on + strand, within Pf6N2E2_2062 at 2455.195 kb on - strand, within Pf6N2E2_2062 at 2455.635 kb on + strand, within Pf6N2E2_2063 at 2455.635 kb on + strand, within Pf6N2E2_2063 at 2455.635 kb on + strand, within Pf6N2E2_2063 at 2455.635 kb on + strand, within Pf6N2E2_2063 at 2455.642 kb on + strand, within Pf6N2E2_2063 at 2455.693 kb on - strand, within Pf6N2E2_2063 at 2455.810 kb on + strand, within Pf6N2E2_2063 at 2456.333 kb on + strand, within Pf6N2E2_2064 at 2456.334 kb on - strand, within Pf6N2E2_2064 at 2456.334 kb on - strand, within Pf6N2E2_2064 at 2456.334 kb on - strand, within Pf6N2E2_2064
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 2,454,422 - -0.2 2,454,422 - -0.2 2,454,422 - -0.5 2,454,422 - +0.1 2,454,510 + -1.7 2,454,511 - -0.7 2,454,595 + +0.1 2,454,595 + -1.2 2,454,596 - -0.6 2,454,596 - +1.6 2,454,635 + -1.1 2,454,636 - +1.6 2,454,670 + -0.9 2,454,670 + +1.2 2,454,670 + -0.5 2,454,671 - +0.4 2,454,671 - +1.1 2,454,671 - -0.1 2,454,671 - -0.0 2,454,671 - -0.4 2,454,671 - -0.6 2,454,739 + +0.3 2,454,739 + +1.4 2,454,805 + +1.2 2,454,805 + -0.7 2,454,805 + -0.1 2,454,805 + -0.0 2,454,805 + +0.3 2,454,805 + -0.2 2,454,806 - +0.0 2,454,806 - +1.4 2,454,806 - +0.3 2,454,806 - -0.9 2,454,846 + +0.0 2,454,846 + -0.9 2,454,851 - -2.3 2,454,900 + +0.5 2,454,901 - -1.0 2,455,194 + Pf6N2E2_2062 0.19 -0.7 2,455,195 - Pf6N2E2_2062 0.19 -0.9 2,455,635 + Pf6N2E2_2063 0.40 +0.6 2,455,635 + Pf6N2E2_2063 0.40 +0.6 2,455,635 + Pf6N2E2_2063 0.40 -0.8 2,455,635 + Pf6N2E2_2063 0.40 +0.4 2,455,642 + Pf6N2E2_2063 0.41 +1.6 2,455,693 - Pf6N2E2_2063 0.48 -0.1 2,455,810 + Pf6N2E2_2063 0.65 +0.1 2,456,333 + Pf6N2E2_2064 0.68 -1.1 2,456,334 - Pf6N2E2_2064 0.69 -0.7 2,456,334 - Pf6N2E2_2064 0.69 -0.8 2,456,334 - Pf6N2E2_2064 0.69 +0.1
Or see this region's nucleotide sequence