Experiment: L-Aspartic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_594 and Pf6N2E2_595 are separated by 197 nucleotides Pf6N2E2_595 and Pf6N2E2_596 are separated by 37 nucleotides Pf6N2E2_596 and Pf6N2E2_597 are separated by 120 nucleotides
Pf6N2E2_594 - FMN reductase, NADPH-dependent, at 670,473 to 671,012
_594
Pf6N2E2_595 - Arsenical resistance operon repressor, at 671,210 to 671,560
_595
Pf6N2E2_596 - Arsenic efflux pump protein, at 671,598 to 672,881
_596
Pf6N2E2_597 - FIG00953564: hypothetical protein, at 673,002 to 673,967
_597
Position (kb) 671
672
673 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 670.598 kb on + strand, within Pf6N2E2_594 at 670.598 kb on + strand, within Pf6N2E2_594 at 670.599 kb on - strand, within Pf6N2E2_594 at 670.615 kb on + strand, within Pf6N2E2_594 at 670.615 kb on + strand, within Pf6N2E2_594 at 670.615 kb on + strand, within Pf6N2E2_594 at 670.615 kb on + strand, within Pf6N2E2_594 at 670.632 kb on + strand, within Pf6N2E2_594 at 670.632 kb on + strand, within Pf6N2E2_594 at 670.632 kb on + strand, within Pf6N2E2_594 at 670.692 kb on + strand, within Pf6N2E2_594 at 670.692 kb on + strand, within Pf6N2E2_594 at 670.692 kb on + strand, within Pf6N2E2_594 at 670.692 kb on + strand, within Pf6N2E2_594 at 670.693 kb on - strand, within Pf6N2E2_594 at 670.968 kb on - strand at 670.968 kb on - strand at 671.031 kb on - strand at 671.173 kb on - strand at 671.174 kb on + strand at 671.175 kb on - strand at 671.175 kb on - strand at 671.188 kb on + strand at 671.206 kb on - strand at 671.206 kb on - strand at 671.420 kb on + strand, within Pf6N2E2_595 at 671.420 kb on + strand, within Pf6N2E2_595 at 671.424 kb on - strand, within Pf6N2E2_595 at 671.424 kb on - strand, within Pf6N2E2_595 at 671.633 kb on + strand at 671.633 kb on + strand at 671.633 kb on + strand at 671.753 kb on + strand, within Pf6N2E2_596 at 671.771 kb on + strand, within Pf6N2E2_596 at 671.771 kb on + strand, within Pf6N2E2_596 at 671.772 kb on - strand, within Pf6N2E2_596 at 671.888 kb on + strand, within Pf6N2E2_596 at 671.888 kb on + strand, within Pf6N2E2_596 at 671.888 kb on + strand, within Pf6N2E2_596 at 672.271 kb on - strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.477 kb on + strand, within Pf6N2E2_596 at 672.507 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.798 kb on + strand at 672.798 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.802 kb on - strand at 672.802 kb on - strand at 672.802 kb on - strand at 672.940 kb on - strand at 673.048 kb on - strand at 673.339 kb on + strand, within Pf6N2E2_597 at 673.378 kb on - strand, within Pf6N2E2_597 at 673.536 kb on - strand, within Pf6N2E2_597 at 673.555 kb on + strand, within Pf6N2E2_597 at 673.555 kb on + strand, within Pf6N2E2_597 at 673.556 kb on - strand, within Pf6N2E2_597 at 673.556 kb on - strand, within Pf6N2E2_597 at 673.603 kb on - strand, within Pf6N2E2_597 at 673.718 kb on - strand, within Pf6N2E2_597 at 673.718 kb on - strand, within Pf6N2E2_597
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (N) remove 670,598 + Pf6N2E2_594 0.23 +2.2 670,598 + Pf6N2E2_594 0.23 -0.0 670,599 - Pf6N2E2_594 0.23 +1.1 670,615 + Pf6N2E2_594 0.26 +0.4 670,615 + Pf6N2E2_594 0.26 +0.7 670,615 + Pf6N2E2_594 0.26 -1.0 670,615 + Pf6N2E2_594 0.26 -0.2 670,632 + Pf6N2E2_594 0.29 +0.2 670,632 + Pf6N2E2_594 0.29 +1.4 670,632 + Pf6N2E2_594 0.29 +0.7 670,692 + Pf6N2E2_594 0.41 -0.7 670,692 + Pf6N2E2_594 0.41 +0.8 670,692 + Pf6N2E2_594 0.41 +0.4 670,692 + Pf6N2E2_594 0.41 +0.5 670,693 - Pf6N2E2_594 0.41 +0.2 670,968 - +0.8 670,968 - +0.0 671,031 - +1.4 671,173 - -1.1 671,174 + -1.2 671,175 - -0.7 671,175 - -0.4 671,188 + -2.2 671,206 - -0.2 671,206 - -1.0 671,420 + Pf6N2E2_595 0.60 -1.5 671,420 + Pf6N2E2_595 0.60 -2.5 671,424 - Pf6N2E2_595 0.61 -1.0 671,424 - Pf6N2E2_595 0.61 -0.7 671,633 + -2.9 671,633 + +0.4 671,633 + -0.2 671,753 + Pf6N2E2_596 0.12 -0.9 671,771 + Pf6N2E2_596 0.13 +0.0 671,771 + Pf6N2E2_596 0.13 -0.1 671,772 - Pf6N2E2_596 0.14 +0.9 671,888 + Pf6N2E2_596 0.23 +0.6 671,888 + Pf6N2E2_596 0.23 -0.3 671,888 + Pf6N2E2_596 0.23 -0.8 672,271 - Pf6N2E2_596 0.52 -0.9 672,465 + Pf6N2E2_596 0.68 +0.4 672,465 + Pf6N2E2_596 0.68 +0.8 672,465 + Pf6N2E2_596 0.68 +2.0 672,477 + Pf6N2E2_596 0.68 -0.2 672,507 + Pf6N2E2_596 0.71 -1.6 672,684 + Pf6N2E2_596 0.85 -1.0 672,684 + Pf6N2E2_596 0.85 -1.4 672,684 + Pf6N2E2_596 0.85 +0.0 672,798 + -1.7 672,798 + +0.0 672,801 + +0.2 672,801 + +0.5 672,801 + +1.1 672,801 + +1.0 672,801 + -0.2 672,802 - -0.3 672,802 - +0.1 672,802 - +0.4 672,940 - +1.8 673,048 - -0.6 673,339 + Pf6N2E2_597 0.35 +0.1 673,378 - Pf6N2E2_597 0.39 +0.7 673,536 - Pf6N2E2_597 0.55 +0.5 673,555 + Pf6N2E2_597 0.57 -2.3 673,555 + Pf6N2E2_597 0.57 +1.4 673,556 - Pf6N2E2_597 0.57 -0.4 673,556 - Pf6N2E2_597 0.57 +1.1 673,603 - Pf6N2E2_597 0.62 +0.4 673,718 - Pf6N2E2_597 0.74 -1.7 673,718 - Pf6N2E2_597 0.74 -1.4
Or see this region's nucleotide sequence