Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2548

Experiment: L-Aspartic Acid (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (N)
3,007,517	+				-0.7
3,007,518	-				-2.1
3,007,518	-				-1.4
3,007,518	-				+0.6
3,007,518	-				-0.1
3,007,756	+				+0.9
3,007,757	-				+0.3
3,007,813	+		Pf6N2E2_2546	0.29	-2.5
3,007,813	+		Pf6N2E2_2546	0.29	+2.2
3,007,813	+		Pf6N2E2_2546	0.29	+0.7
3,007,904	+		Pf6N2E2_2546	0.74	-0.8
3,007,904	+		Pf6N2E2_2546	0.74	+1.0
3,007,932	+		Pf6N2E2_2546	0.88	+0.8
3,007,932	+		Pf6N2E2_2546	0.88	-0.6
3,007,947	+				+2.1
3,007,947	+				-0.6
3,007,947	+				-0.8
3,007,947	+				-0.1
3,007,947	+				+0.4
3,007,948	-				-0.8
3,007,948	-				+1.3
3,007,948	-				-1.1
3,008,044	-				-2.1
3,008,044	-				-0.1
3,008,104	-				+1.0
3,008,104	-				+0.2
3,008,238	+		Pf6N2E2_2547	0.35	+0.3
3,008,238	+		Pf6N2E2_2547	0.35	-1.5
3,008,238	+		Pf6N2E2_2547	0.35	+0.7
3,008,238	+		Pf6N2E2_2547	0.35	+0.1
3,008,238	+		Pf6N2E2_2547	0.35	+0.4
3,008,238	+		Pf6N2E2_2547	0.35	+0.9
3,008,239	-		Pf6N2E2_2547	0.35	-0.8
3,008,239	-		Pf6N2E2_2547	0.35	+0.9
3,008,240	+		Pf6N2E2_2547	0.35	-0.9
3,008,240	+		Pf6N2E2_2547	0.35	+0.5
3,008,240	+		Pf6N2E2_2547	0.35	-0.2
3,008,240	+		Pf6N2E2_2547	0.35	-0.1
3,008,240	+		Pf6N2E2_2547	0.35	-0.1
3,008,240	+		Pf6N2E2_2547	0.35	+0.7
3,008,240	+		Pf6N2E2_2547	0.35	-0.9
3,008,240	+		Pf6N2E2_2547	0.35	+0.3
3,008,240	+		Pf6N2E2_2547	0.35	-0.4
3,008,240	+		Pf6N2E2_2547	0.35	+0.5
3,008,241	-		Pf6N2E2_2547	0.35	+0.3
3,008,241	-		Pf6N2E2_2547	0.35	+1.0
3,008,241	-		Pf6N2E2_2547	0.35	-0.3
3,008,241	-		Pf6N2E2_2547	0.35	-0.1
3,008,253	-		Pf6N2E2_2547	0.39	-0.7
3,008,261	+		Pf6N2E2_2547	0.41	+0.7
3,008,276	+		Pf6N2E2_2547	0.45	+0.0
3,008,276	+		Pf6N2E2_2547	0.45	-1.1
3,008,277	-		Pf6N2E2_2547	0.45	-2.1
3,008,385	-		Pf6N2E2_2547	0.74	-0.9
3,008,429	+		Pf6N2E2_2547	0.85	+0.3
3,008,429	+		Pf6N2E2_2547	0.85	-2.3
3,008,429	+		Pf6N2E2_2547	0.85	+0.5
3,008,429	+		Pf6N2E2_2547	0.85	+0.1
3,008,430	-		Pf6N2E2_2547	0.85	-1.2
3,008,430	-		Pf6N2E2_2547	0.85	+0.1
3,008,430	-		Pf6N2E2_2547	0.85	+0.6
3,008,430	-		Pf6N2E2_2547	0.85	+1.3
3,008,651	+		Pf6N2E2_2548	0.19	-2.6
3,008,651	+		Pf6N2E2_2548	0.19	-0.5
3,008,651	+				-0.8
3,008,651	+		Pf6N2E2_2548	0.19	-0.8
3,008,651	+		Pf6N2E2_2548	0.19	+0.4
3,008,651	+		Pf6N2E2_2548	0.19	+0.9
3,008,651	+		Pf6N2E2_2548	0.19	-0.3
3,008,651	+		Pf6N2E2_2548	0.19	-0.3
3,008,651	+		Pf6N2E2_2548	0.19	+0.9
3,008,652	-		Pf6N2E2_2548	0.19	+1.6
3,008,652	-		Pf6N2E2_2548	0.19	+0.6
3,008,652	-		Pf6N2E2_2548	0.19	+1.2
3,008,652	-		Pf6N2E2_2548	0.19	-0.3
3,008,652	-		Pf6N2E2_2548	0.19	+0.3
3,008,652	-		Pf6N2E2_2548	0.19	+0.3
3,008,652	-		Pf6N2E2_2548	0.19	-0.5
3,008,657	+		Pf6N2E2_2548	0.20	+0.4
3,008,657	+		Pf6N2E2_2548	0.20	-1.3
3,008,657	+		Pf6N2E2_2548	0.20	+0.6
3,008,658	-		Pf6N2E2_2548	0.20	+0.4
3,008,658	-		Pf6N2E2_2548	0.20	+1.2
3,008,658	-		Pf6N2E2_2548	0.20	+0.4
3,008,782	+		Pf6N2E2_2548	0.35	+0.4
3,008,782	+		Pf6N2E2_2548	0.35	+0.6
3,008,782	+		Pf6N2E2_2548	0.35	-0.8
3,008,782	+		Pf6N2E2_2548	0.35	+1.0
3,008,782	+		Pf6N2E2_2548	0.35	-0.8
3,008,783	-		Pf6N2E2_2548	0.35	-0.1
3,008,783	-		Pf6N2E2_2548	0.35	-1.2
3,008,783	-		Pf6N2E2_2548	0.35	+0.5
3,008,783	-		Pf6N2E2_2548	0.35	+1.5
3,008,788	+		Pf6N2E2_2548	0.36	-1.5
3,008,789	-		Pf6N2E2_2548	0.36	-0.4
3,008,789	-		Pf6N2E2_2548	0.36	+1.2
3,008,789	-		Pf6N2E2_2548	0.36	-0.1
3,008,789	-		Pf6N2E2_2548	0.36	+0.8
3,008,864	+		Pf6N2E2_2548	0.45	-1.1
3,008,864	+		Pf6N2E2_2548	0.45	-0.3
3,008,865	-		Pf6N2E2_2548	0.45	-0.1
3,008,865	-		Pf6N2E2_2548	0.45	+1.2
3,008,865	-		Pf6N2E2_2548	0.45	+1.3
3,009,125	+		Pf6N2E2_2548	0.77	-0.4
3,009,125	+		Pf6N2E2_2548	0.77	+0.2
3,009,179	-		Pf6N2E2_2548	0.84	-0.5
3,009,179	-		Pf6N2E2_2548	0.84	-0.7
3,009,179	-		Pf6N2E2_2548	0.84	-0.7
3,009,179	-		Pf6N2E2_2548	0.84	-0.8
3,009,312	+				-2.0
3,009,342	+				-0.5
3,009,342	+				-1.3
3,009,353	+				+0.7
3,009,440	+				-1.3
3,009,462	+				-1.4
3,009,462	+				-1.1
3,009,463	-				+0.9
3,009,463	-				+0.2
3,009,463	-				-0.7
3,009,465	+				+0.5
3,009,465	+				-0.0
3,009,466	-				+0.7
3,009,466	-				+0.0
3,009,480	+				+0.6
3,009,481	-				-0.2
3,009,497	+				-1.0
3,009,497	+				+1.5
3,009,498	-				+0.6
3,009,498	-				-1.1
3,009,510	+				-0.8
3,009,510	+				+0.9
3,009,511	-				-0.5
3,009,511	-				-1.3
3,009,511	-				+0.2
3,009,541	+				-0.9
3,009,541	+				+0.3
3,009,542	-				-0.8
3,009,555	+				-1.3
3,009,555	+				-1.0
3,009,555	+				+0.9
3,009,556	-				+1.5
3,009,556	-				+0.3
3,009,556	-				+1.5
3,009,556	-				+1.1
3,009,559	+				+0.2
3,009,559	+				-0.8
3,009,559	+				+0.6
3,009,559	+				-0.7
3,009,559	+				-0.3
3,009,560	-				-0.7
3,009,560	-				-0.1
3,009,560	-				+0.2
3,009,560	-				-0.8
3,009,560	-				+2.0
3,009,678	+		Pf6N2E2_2549	0.87	-2.1
3,009,678	+		Pf6N2E2_2549	0.87	-1.3
3,009,682	-				+0.1
3,009,693	+				-0.6
3,009,693	+				-0.1
3,009,694	-				+0.0
3,009,694	-				+0.3
3,009,694	-				+0.5
3,009,694	-				+0.3
3,009,694	-				-0.2
3,009,695	+				+0.4
3,009,695	+				+0.4
3,009,695	+				-0.3
3,009,696	-				-0.8
3,009,707	+				-0.4
3,009,746	+				-0.5
3,009,746	+				+1.1
3,009,747	-				-2.6
3,009,909	+				-0.0
3,009,915	+				-0.3
3,009,915	+				-0.5
3,009,915	+				-1.4
3,009,915	+				-0.7
3,009,916	-				-0.8
3,009,916	-				+1.7
3,009,916	-				-1.7
3,009,916	-				+1.6
3,009,916	-				+0.6
3,009,916	-				-1.7
3,009,916	-				-1.1
3,009,916	-				+0.9
3,009,916	-				-0.4
3,009,916	-				-0.1
3,009,916	-				+1.5
3,010,073	+		Pf6N2E2_2550	0.15	-0.8
3,010,074	-		Pf6N2E2_2550	0.15	-0.8
3,010,074	-		Pf6N2E2_2550	0.15	-0.8
3,010,123	+		Pf6N2E2_2550	0.17	+0.3
3,010,124	-		Pf6N2E2_2550	0.17	+0.0
3,010,124	-		Pf6N2E2_2550	0.17	+0.4
3,010,124	-		Pf6N2E2_2550	0.17	-1.2
3,010,127	+		Pf6N2E2_2550	0.17	-0.1
3,010,127	+		Pf6N2E2_2550	0.17	-0.1
3,010,127	+		Pf6N2E2_2550	0.17	-0.7
3,010,127	+		Pf6N2E2_2550	0.17	+1.1
3,010,127	+		Pf6N2E2_2550	0.17	+0.5
3,010,127	+		Pf6N2E2_2550	0.17	+0.7
3,010,127	+		Pf6N2E2_2550	0.17	+0.4
3,010,127	+		Pf6N2E2_2550	0.17	+0.2
3,010,127	+		Pf6N2E2_2550	0.17	-2.3
3,010,128	-		Pf6N2E2_2550	0.18	-2.0
3,010,128	-		Pf6N2E2_2550	0.18	+0.1
3,010,128	-		Pf6N2E2_2550	0.18	+0.2
3,010,128	-		Pf6N2E2_2550	0.18	-0.8
3,010,128	-		Pf6N2E2_2550	0.18	+0.5
3,010,128	-		Pf6N2E2_2550	0.18	-0.2
3,010,128	-		Pf6N2E2_2550	0.18	-0.7
3,010,128	-		Pf6N2E2_2550	0.18	+0.7
3,010,278	+		Pf6N2E2_2550	0.25	+0.2
3,010,278	+		Pf6N2E2_2550	0.25	+0.6
3,010,278	+		Pf6N2E2_2550	0.25	-1.0
3,010,278	+		Pf6N2E2_2550	0.25	+0.5
3,010,278	+		Pf6N2E2_2550	0.25	-0.3
3,010,279	-		Pf6N2E2_2550	0.25	+0.9
3,010,279	-		Pf6N2E2_2550	0.25	+1.2
3,010,279	-		Pf6N2E2_2550	0.25	-0.1
3,010,279	-		Pf6N2E2_2550	0.25	-0.6
3,010,279	-		Pf6N2E2_2550	0.25	-1.3
3,010,279	-		Pf6N2E2_2550	0.25	-0.5
3,010,279	-		Pf6N2E2_2550	0.25	-1.3
3,010,279	-		Pf6N2E2_2550	0.25	-2.8