Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2958

Experiment: L-Lysine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (N)
3,449,243	+		Pf6N2E2_2957	0.74	+0.3
3,449,324	+		Pf6N2E2_2957	0.78	+0.4
3,449,325	-		Pf6N2E2_2957	0.78	-0.4
3,449,325	-		Pf6N2E2_2957	0.78	-2.4
3,449,361	-		Pf6N2E2_2957	0.81	-0.0
3,449,370	-		Pf6N2E2_2957	0.81	-0.2
3,449,438	+		Pf6N2E2_2957	0.85	-1.6
3,449,439	-		Pf6N2E2_2957	0.85	-0.7
3,449,636	-				-1.8
3,449,656	+				+0.9
3,449,657	-				-0.3
3,449,657	-				-0.1
3,449,657	-				+1.3
3,449,657	-				-1.5
3,449,657	-				-1.8
3,449,687	+				-0.2
3,449,687	+				-0.1
3,449,687	+				-0.2
3,449,876	+				-0.5
3,449,876	+				-0.2
3,449,876	+				-0.6
3,449,877	-				-0.2
3,449,877	-				-0.8
3,449,877	-				-0.1
3,449,877	-				-2.1
3,449,877	-				-0.8
3,449,877	-				-1.8
3,449,877	-				-1.2
3,449,877	-				-0.8
3,449,877	-				-0.5
3,449,877	-				+0.1
3,449,877	-				-1.2
3,449,965	-				-2.3
3,449,970	+				-0.3
3,449,970	+				+1.4
3,449,970	+				+1.3
3,449,980	+				+2.0
3,449,981	-				-1.6
3,450,007	+				+1.3
3,450,007	+				+0.8
3,450,007	+				+1.2
3,450,007	+				+1.4
3,450,007	+				+2.1
3,450,007	+				+1.2
3,450,007	+				+0.2
3,450,008	-				-1.7
3,450,008	-				-1.6
3,450,008	-				-2.3
3,450,008	-				-1.3
3,450,008	-				-2.8
3,450,008	-				+0.1
3,450,011	+				+1.5
3,450,012	-				-0.1
3,450,012	-				-1.7
3,450,031	-				-1.2
3,450,031	-				-1.9
3,450,039	+				-0.1
3,450,050	+				-0.6
3,450,124	+				+0.2
3,450,124	+				-1.5
3,450,124	+				+0.6
3,450,124	+				-2.7
3,450,124	+				-2.1
3,450,124	+				-0.0
3,450,125	-				-0.8
3,450,125	-				+0.1
3,450,158	-		Pf6N2E2_2958	0.14	-1.2
3,450,303	+		Pf6N2E2_2958	0.32	-1.8
3,450,303	+		Pf6N2E2_2958	0.32	-0.7
3,450,397	+		Pf6N2E2_2958	0.44	-4.2
3,450,397	+		Pf6N2E2_2958	0.44	-0.4
3,450,397	+		Pf6N2E2_2958	0.44	-1.8
3,450,397	+		Pf6N2E2_2958	0.44	-0.7
3,450,397	+		Pf6N2E2_2958	0.44	-1.4
3,450,397	+		Pf6N2E2_2958	0.44	+0.1
3,450,397	+		Pf6N2E2_2958	0.44	-2.5
3,450,398	-		Pf6N2E2_2958	0.44	-3.2
3,450,398	-		Pf6N2E2_2958	0.44	-0.7
3,450,490	+		Pf6N2E2_2958	0.56	-0.7
3,450,490	+		Pf6N2E2_2958	0.56	-0.1
3,450,491	-		Pf6N2E2_2958	0.56	-0.8
3,450,556	+		Pf6N2E2_2958	0.64	-1.0
3,450,649	+		Pf6N2E2_2958	0.76	-1.0
3,450,717	+		Pf6N2E2_2958	0.85	-1.5
3,450,717	+		Pf6N2E2_2958	0.85	+1.2
3,450,718	-		Pf6N2E2_2958	0.85	-0.1
3,450,744	+		Pf6N2E2_2958	0.88	-1.7
3,450,745	-		Pf6N2E2_2958	0.89	-1.9
3,450,750	+		Pf6N2E2_2958	0.89	-0.4
3,450,750	+		Pf6N2E2_2958	0.89	-1.6
3,450,750	+		Pf6N2E2_2958	0.89	-1.4
3,450,751	-		Pf6N2E2_2958	0.89	-2.1
3,450,761	+				-2.9
3,450,778	+				-2.1
3,450,821	-				-0.8
3,450,832	+				+0.2
3,450,832	+				-1.8
3,450,833	-				-2.2
3,450,833	-				-0.7
3,450,833	-				-1.8
3,450,991	-		Pf6N2E2_2959	0.13	-1.3
3,450,999	+		Pf6N2E2_2959	0.15	-1.4
3,451,000	-		Pf6N2E2_2959	0.15	-1.8
3,451,000	-		Pf6N2E2_2959	0.15	-1.9
3,451,088	+		Pf6N2E2_2959	0.27	+0.2
3,451,088	+		Pf6N2E2_2959	0.27	-1.9
3,451,088	+		Pf6N2E2_2959	0.27	-0.2
3,451,088	+		Pf6N2E2_2959	0.27	-1.4
3,451,089	-		Pf6N2E2_2959	0.27	-1.4
3,451,142	+		Pf6N2E2_2959	0.34	-1.3
3,451,143	-		Pf6N2E2_2959	0.34	-1.3
3,451,143	-		Pf6N2E2_2959	0.34	-0.8
3,451,194	-		Pf6N2E2_2959	0.41	-0.7
3,451,194	-		Pf6N2E2_2959	0.41	-1.4
3,451,194	-		Pf6N2E2_2959	0.41	-0.3
3,451,244	+		Pf6N2E2_2959	0.48	-1.1
3,451,244	+		Pf6N2E2_2959	0.48	-0.8
3,451,244	+		Pf6N2E2_2959	0.48	-1.1
3,451,244	+		Pf6N2E2_2959	0.48	-3.3
3,451,245	-		Pf6N2E2_2959	0.48	-1.4
3,451,245	-		Pf6N2E2_2959	0.48	-1.1
3,451,253	+		Pf6N2E2_2959	0.49	-1.0
3,451,254	-		Pf6N2E2_2959	0.50	-3.1
3,451,254	-		Pf6N2E2_2959	0.50	-0.3
3,451,496	+		Pf6N2E2_2959	0.83	-1.7
3,451,497	-		Pf6N2E2_2959	0.83	-1.7
3,451,497	-		Pf6N2E2_2959	0.83	-0.5
3,451,508	+		Pf6N2E2_2959	0.84	-1.9
3,451,535	+		Pf6N2E2_2959	0.88	-2.1
3,451,535	+		Pf6N2E2_2959	0.88	-2.1
3,451,535	+		Pf6N2E2_2959	0.88	-1.0
3,451,535	+		Pf6N2E2_2959	0.88	-0.7
3,451,536	-		Pf6N2E2_2959	0.88	-1.2
3,451,639	+				-0.8
3,451,639	+				-0.9
3,451,777	+		Pf6N2E2_2960	0.22	-2.4
3,451,777	+		Pf6N2E2_2960	0.22	-0.2
3,451,777	+		Pf6N2E2_2960	0.22	-0.7
3,451,778	-		Pf6N2E2_2960	0.23	-0.8
3,451,801	+		Pf6N2E2_2960	0.26	-1.7
3,451,801	+		Pf6N2E2_2960	0.26	-0.3
3,451,802	-		Pf6N2E2_2960	0.26	-0.8
3,451,802	-		Pf6N2E2_2960	0.26	-1.7
3,451,802	-		Pf6N2E2_2960	0.26	-1.7
3,451,802	-		Pf6N2E2_2960	0.26	+0.1
3,451,807	+		Pf6N2E2_2960	0.27	-1.8
3,451,807	+		Pf6N2E2_2960	0.27	-1.3
3,451,807	+		Pf6N2E2_2960	0.27	-3.4
3,451,807	+		Pf6N2E2_2960	0.27	-0.1
3,451,808	-		Pf6N2E2_2960	0.27	-1.2
3,451,808	-		Pf6N2E2_2960	0.27	-1.5
3,451,808	-		Pf6N2E2_2960	0.27	-1.0
3,451,808	-		Pf6N2E2_2960	0.27	-0.5
3,451,808	-		Pf6N2E2_2960	0.27	+0.2
3,451,808	-		Pf6N2E2_2960	0.27	+0.1
3,451,831	+		Pf6N2E2_2960	0.30	-1.6
3,451,831	+		Pf6N2E2_2960	0.30	-0.1
3,451,831	+		Pf6N2E2_2960	0.30	-0.8
3,451,831	+		Pf6N2E2_2960	0.30	-2.0
3,451,831	+		Pf6N2E2_2960	0.30	-3.0
3,451,832	-		Pf6N2E2_2960	0.30	-0.7
3,451,832	-		Pf6N2E2_2960	0.30	-0.5
3,451,832	-		Pf6N2E2_2960	0.30	-1.4
3,451,832	-		Pf6N2E2_2960	0.30	-2.3
3,451,832	-		Pf6N2E2_2960	0.30	-1.9
3,451,832	-		Pf6N2E2_2960	0.30	-1.6
3,451,832	-		Pf6N2E2_2960	0.30	-1.9
3,451,832	-		Pf6N2E2_2960	0.30	-1.9
3,451,832	-		Pf6N2E2_2960	0.30	-0.7
3,451,832	-		Pf6N2E2_2960	0.30	-2.5