Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4755 and Pf6N2E2_4756 are separated by 211 nucleotides Pf6N2E2_4756 and Pf6N2E2_4757 are separated by 66 nucleotides Pf6N2E2_4757 and Pf6N2E2_4758 are separated by 58 nucleotides
Pf6N2E2_4755 - YihE protein, required for LPS synthesis, at 5,493,354 to 5,494,328
_4755
Pf6N2E2_4756 - Putative phosphatase, at 5,494,540 to 5,496,435
_4756
Pf6N2E2_4757 - DNA-binding domain of ModE / Molybdate-binding domain of ModE, at 5,496,502 to 5,497,266
_4757
Pf6N2E2_4758 - Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy, at 5,497,325 to 5,498,065
_4758
Position (kb)
5494
5495
5496
5497 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5493.772 kb on + strand, within Pf6N2E2_4755 at 5493.772 kb on + strand, within Pf6N2E2_4755 at 5493.773 kb on - strand, within Pf6N2E2_4755 at 5493.773 kb on - strand, within Pf6N2E2_4755 at 5494.099 kb on + strand, within Pf6N2E2_4755 at 5494.099 kb on + strand, within Pf6N2E2_4755 at 5494.099 kb on + strand, within Pf6N2E2_4755 at 5494.099 kb on + strand, within Pf6N2E2_4755 at 5494.100 kb on - strand, within Pf6N2E2_4755 at 5494.168 kb on + strand, within Pf6N2E2_4755 at 5494.168 kb on + strand, within Pf6N2E2_4755 at 5494.169 kb on - strand, within Pf6N2E2_4755 at 5494.214 kb on - strand, within Pf6N2E2_4755 at 5494.214 kb on - strand, within Pf6N2E2_4755 at 5494.228 kb on + strand, within Pf6N2E2_4755 at 5494.229 kb on - strand, within Pf6N2E2_4755 at 5494.229 kb on - strand, within Pf6N2E2_4755 at 5494.290 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.517 kb on + strand at 5494.518 kb on - strand at 5494.518 kb on - strand at 5494.518 kb on - strand at 5494.518 kb on - strand at 5494.518 kb on - strand at 5494.518 kb on - strand at 5494.662 kb on + strand at 5494.662 kb on + strand at 5494.662 kb on + strand at 5494.662 kb on + strand at 5494.663 kb on - strand at 5494.663 kb on - strand at 5494.663 kb on - strand at 5494.670 kb on + strand at 5494.670 kb on + strand at 5494.670 kb on + strand at 5494.670 kb on + strand at 5494.670 kb on + strand at 5494.671 kb on - strand at 5494.671 kb on - strand at 5494.924 kb on + strand, within Pf6N2E2_4756 at 5495.018 kb on + strand, within Pf6N2E2_4756 at 5495.019 kb on - strand, within Pf6N2E2_4756 at 5495.040 kb on + strand, within Pf6N2E2_4756 at 5495.099 kb on + strand, within Pf6N2E2_4756 at 5495.099 kb on + strand, within Pf6N2E2_4756 at 5495.100 kb on - strand, within Pf6N2E2_4756 at 5495.100 kb on - strand, within Pf6N2E2_4756 at 5495.100 kb on - strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.321 kb on + strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.322 kb on - strand, within Pf6N2E2_4756 at 5495.399 kb on + strand, within Pf6N2E2_4756 at 5495.399 kb on + strand, within Pf6N2E2_4756 at 5495.399 kb on + strand, within Pf6N2E2_4756 at 5495.399 kb on + strand, within Pf6N2E2_4756 at 5495.399 kb on + strand, within Pf6N2E2_4756 at 5495.400 kb on - strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.432 kb on + strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.433 kb on - strand, within Pf6N2E2_4756 at 5495.509 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.729 kb on + strand, within Pf6N2E2_4756 at 5495.730 kb on - strand, within Pf6N2E2_4756 at 5495.730 kb on - strand, within Pf6N2E2_4756 at 5495.730 kb on - strand, within Pf6N2E2_4756 at 5495.730 kb on - strand, within Pf6N2E2_4756 at 5495.730 kb on - strand, within Pf6N2E2_4756 at 5495.879 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.008 kb on + strand, within Pf6N2E2_4756 at 5496.009 kb on - strand, within Pf6N2E2_4756 at 5496.009 kb on - strand, within Pf6N2E2_4756 at 5496.009 kb on - strand, within Pf6N2E2_4756 at 5496.009 kb on - strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.014 kb on + strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.015 kb on - strand, within Pf6N2E2_4756 at 5496.023 kb on + strand, within Pf6N2E2_4756 at 5496.023 kb on + strand, within Pf6N2E2_4756 at 5496.206 kb on + strand, within Pf6N2E2_4756 at 5496.207 kb on - strand, within Pf6N2E2_4756 at 5496.424 kb on + strand at 5496.424 kb on + strand at 5496.424 kb on + strand at 5496.424 kb on + strand at 5496.424 kb on + strand at 5496.425 kb on - strand at 5496.425 kb on - strand at 5496.425 kb on - strand at 5496.425 kb on - strand at 5496.427 kb on + strand at 5496.427 kb on + strand at 5496.427 kb on + strand at 5496.427 kb on + strand at 5496.428 kb on - strand at 5496.487 kb on + strand at 5496.487 kb on + strand at 5496.487 kb on + strand at 5496.487 kb on + strand at 5496.487 kb on + strand at 5496.487 kb on + strand at 5496.488 kb on - strand at 5496.488 kb on - strand at 5496.488 kb on - strand at 5496.488 kb on - strand at 5496.488 kb on - strand at 5496.503 kb on + strand at 5496.503 kb on + strand at 5496.504 kb on - strand at 5496.504 kb on - strand at 5496.583 kb on + strand, within Pf6N2E2_4757 at 5496.696 kb on + strand, within Pf6N2E2_4757 at 5496.696 kb on + strand, within Pf6N2E2_4757 at 5496.697 kb on - strand, within Pf6N2E2_4757 at 5496.733 kb on + strand, within Pf6N2E2_4757 at 5496.733 kb on + strand, within Pf6N2E2_4757 at 5496.733 kb on + strand, within Pf6N2E2_4757 at 5496.733 kb on + strand, within Pf6N2E2_4757 at 5496.734 kb on - strand, within Pf6N2E2_4757 at 5496.902 kb on + strand, within Pf6N2E2_4757 at 5496.902 kb on + strand, within Pf6N2E2_4757 at 5496.902 kb on + strand, within Pf6N2E2_4757 at 5496.903 kb on - strand, within Pf6N2E2_4757 at 5496.903 kb on - strand, within Pf6N2E2_4757 at 5496.903 kb on - strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.982 kb on + strand, within Pf6N2E2_4757 at 5496.983 kb on - strand, within Pf6N2E2_4757 at 5496.983 kb on - strand, within Pf6N2E2_4757 at 5496.983 kb on - strand, within Pf6N2E2_4757 at 5496.983 kb on - strand, within Pf6N2E2_4757 at 5497.014 kb on - strand, within Pf6N2E2_4757 at 5497.146 kb on - strand, within Pf6N2E2_4757 at 5497.146 kb on - strand, within Pf6N2E2_4757 at 5497.365 kb on + strand at 5497.365 kb on + strand at 5497.365 kb on + strand at 5497.365 kb on + strand at 5497.366 kb on - strand at 5497.366 kb on - strand at 5497.366 kb on - strand at 5497.366 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 5,493,772 + Pf6N2E2_4755 0.43 -0.2 5,493,772 + Pf6N2E2_4755 0.43 +0.2 5,493,773 - Pf6N2E2_4755 0.43 -1.0 5,493,773 - Pf6N2E2_4755 0.43 -0.4 5,494,099 + Pf6N2E2_4755 0.76 +0.9 5,494,099 + Pf6N2E2_4755 0.76 -0.8 5,494,099 + Pf6N2E2_4755 0.76 -1.0 5,494,099 + Pf6N2E2_4755 0.76 -0.3 5,494,100 - Pf6N2E2_4755 0.77 +0.9 5,494,168 + Pf6N2E2_4755 0.83 +0.0 5,494,168 + Pf6N2E2_4755 0.83 -0.1 5,494,169 - Pf6N2E2_4755 0.84 -0.1 5,494,214 - Pf6N2E2_4755 0.88 +0.7 5,494,214 - Pf6N2E2_4755 0.88 +0.7 5,494,228 + Pf6N2E2_4755 0.90 +1.0 5,494,229 - Pf6N2E2_4755 0.90 +0.3 5,494,229 - Pf6N2E2_4755 0.90 -0.1 5,494,290 + +0.5 5,494,517 + +0.5 5,494,517 + +0.5 5,494,517 + +0.9 5,494,517 + -0.8 5,494,517 + -0.3 5,494,517 + +0.4 5,494,517 + +0.2 5,494,517 + -0.6 5,494,517 + +0.6 5,494,517 + -0.8 5,494,517 + -0.2 5,494,517 + -0.2 5,494,518 - -0.4 5,494,518 - +0.6 5,494,518 - +0.4 5,494,518 - +0.0 5,494,518 - +0.4 5,494,518 - +0.0 5,494,662 + +0.2 5,494,662 + -0.6 5,494,662 + -0.7 5,494,662 + +0.6 5,494,663 - +0.0 5,494,663 - -0.5 5,494,663 - -0.1 5,494,670 + +0.2 5,494,670 + -0.1 5,494,670 + +0.8 5,494,670 + +0.4 5,494,670 + -1.0 5,494,671 - +0.1 5,494,671 - +0.9 5,494,924 + Pf6N2E2_4756 0.20 -1.4 5,495,018 + Pf6N2E2_4756 0.25 +0.3 5,495,019 - Pf6N2E2_4756 0.25 -3.1 5,495,040 + Pf6N2E2_4756 0.26 -0.1 5,495,099 + Pf6N2E2_4756 0.29 +0.5 5,495,099 + Pf6N2E2_4756 0.29 +1.3 5,495,100 - Pf6N2E2_4756 0.30 +1.2 5,495,100 - Pf6N2E2_4756 0.30 -1.2 5,495,100 - Pf6N2E2_4756 0.30 +0.9 5,495,321 + Pf6N2E2_4756 0.41 +0.2 5,495,321 + Pf6N2E2_4756 0.41 -0.6 5,495,321 + Pf6N2E2_4756 0.41 +0.6 5,495,321 + Pf6N2E2_4756 0.41 -0.1 5,495,321 + Pf6N2E2_4756 0.41 +1.0 5,495,321 + Pf6N2E2_4756 0.41 -0.0 5,495,321 + Pf6N2E2_4756 0.41 -0.2 5,495,321 + Pf6N2E2_4756 0.41 +1.2 5,495,321 + Pf6N2E2_4756 0.41 +0.5 5,495,321 + Pf6N2E2_4756 0.41 -0.3 5,495,321 + Pf6N2E2_4756 0.41 -0.2 5,495,321 + Pf6N2E2_4756 0.41 +0.5 5,495,322 - Pf6N2E2_4756 0.41 -1.9 5,495,322 - Pf6N2E2_4756 0.41 -0.3 5,495,322 - Pf6N2E2_4756 0.41 +0.2 5,495,322 - Pf6N2E2_4756 0.41 +1.3 5,495,322 - Pf6N2E2_4756 0.41 -0.0 5,495,322 - Pf6N2E2_4756 0.41 +0.4 5,495,399 + Pf6N2E2_4756 0.45 -0.4 5,495,399 + Pf6N2E2_4756 0.45 +0.1 5,495,399 + Pf6N2E2_4756 0.45 +0.3 5,495,399 + Pf6N2E2_4756 0.45 +1.2 5,495,399 + Pf6N2E2_4756 0.45 +0.4 5,495,400 - Pf6N2E2_4756 0.45 -2.0 5,495,432 + Pf6N2E2_4756 0.47 -0.6 5,495,432 + Pf6N2E2_4756 0.47 +0.1 5,495,432 + Pf6N2E2_4756 0.47 -1.2 5,495,432 + Pf6N2E2_4756 0.47 -0.1 5,495,432 + Pf6N2E2_4756 0.47 -0.8 5,495,432 + Pf6N2E2_4756 0.47 -0.8 5,495,432 + Pf6N2E2_4756 0.47 +1.6 5,495,432 + Pf6N2E2_4756 0.47 -0.7 5,495,432 + Pf6N2E2_4756 0.47 +0.6 5,495,433 - Pf6N2E2_4756 0.47 +0.9 5,495,433 - Pf6N2E2_4756 0.47 +0.4 5,495,433 - Pf6N2E2_4756 0.47 +0.4 5,495,433 - Pf6N2E2_4756 0.47 +0.6 5,495,433 - Pf6N2E2_4756 0.47 +0.2 5,495,433 - Pf6N2E2_4756 0.47 +1.2 5,495,433 - Pf6N2E2_4756 0.47 +0.7 5,495,433 - Pf6N2E2_4756 0.47 +1.2 5,495,433 - Pf6N2E2_4756 0.47 -0.6 5,495,509 + Pf6N2E2_4756 0.51 -0.5 5,495,729 + Pf6N2E2_4756 0.63 -2.9 5,495,729 + Pf6N2E2_4756 0.63 +0.5 5,495,729 + Pf6N2E2_4756 0.63 -0.8 5,495,729 + Pf6N2E2_4756 0.63 -0.6 5,495,729 + Pf6N2E2_4756 0.63 +0.7 5,495,729 + Pf6N2E2_4756 0.63 +1.6 5,495,730 - Pf6N2E2_4756 0.63 +0.3 5,495,730 - Pf6N2E2_4756 0.63 +1.6 5,495,730 - Pf6N2E2_4756 0.63 -0.9 5,495,730 - Pf6N2E2_4756 0.63 +0.6 5,495,730 - Pf6N2E2_4756 0.63 +1.2 5,495,879 + Pf6N2E2_4756 0.71 +0.3 5,496,008 + Pf6N2E2_4756 0.77 +1.2 5,496,008 + Pf6N2E2_4756 0.77 -2.6 5,496,008 + Pf6N2E2_4756 0.77 +0.1 5,496,008 + Pf6N2E2_4756 0.77 +0.6 5,496,008 + Pf6N2E2_4756 0.77 -0.3 5,496,008 + Pf6N2E2_4756 0.77 +0.5 5,496,009 - Pf6N2E2_4756 0.77 +0.8 5,496,009 - Pf6N2E2_4756 0.77 +0.7 5,496,009 - Pf6N2E2_4756 0.77 +0.4 5,496,009 - Pf6N2E2_4756 0.77 +1.2 5,496,014 + Pf6N2E2_4756 0.78 -0.1 5,496,014 + Pf6N2E2_4756 0.78 -0.3 5,496,014 + Pf6N2E2_4756 0.78 +0.3 5,496,014 + Pf6N2E2_4756 0.78 -1.2 5,496,014 + Pf6N2E2_4756 0.78 -0.5 5,496,014 + Pf6N2E2_4756 0.78 -0.0 5,496,014 + Pf6N2E2_4756 0.78 +0.7 5,496,014 + Pf6N2E2_4756 0.78 -0.7 5,496,014 + Pf6N2E2_4756 0.78 +0.8 5,496,015 - Pf6N2E2_4756 0.78 +0.8 5,496,015 - Pf6N2E2_4756 0.78 +0.8 5,496,015 - Pf6N2E2_4756 0.78 -1.2 5,496,015 - Pf6N2E2_4756 0.78 -0.2 5,496,015 - Pf6N2E2_4756 0.78 -1.1 5,496,015 - Pf6N2E2_4756 0.78 +0.0 5,496,015 - Pf6N2E2_4756 0.78 +0.1 5,496,023 + Pf6N2E2_4756 0.78 +0.1 5,496,023 + Pf6N2E2_4756 0.78 -0.1 5,496,206 + Pf6N2E2_4756 0.88 +0.2 5,496,207 - Pf6N2E2_4756 0.88 -0.3 5,496,424 + +1.1 5,496,424 + +0.6 5,496,424 + +0.6 5,496,424 + +0.1 5,496,424 + +1.0 5,496,425 - +0.0 5,496,425 - -1.1 5,496,425 - -0.1 5,496,425 - +0.5 5,496,427 + +0.6 5,496,427 + -0.5 5,496,427 + -0.1 5,496,427 + +0.4 5,496,428 - -0.4 5,496,487 + +0.2 5,496,487 + +0.6 5,496,487 + -0.2 5,496,487 + +0.9 5,496,487 + +0.2 5,496,487 + -0.8 5,496,488 - -0.2 5,496,488 - +0.9 5,496,488 - -0.2 5,496,488 - -1.7 5,496,488 - +0.3 5,496,503 + +0.5 5,496,503 + +0.1 5,496,504 - +0.9 5,496,504 - -0.9 5,496,583 + Pf6N2E2_4757 0.11 +0.1 5,496,696 + Pf6N2E2_4757 0.25 -0.4 5,496,696 + Pf6N2E2_4757 0.25 +1.1 5,496,697 - Pf6N2E2_4757 0.25 -1.3 5,496,733 + Pf6N2E2_4757 0.30 -0.2 5,496,733 + Pf6N2E2_4757 0.30 -0.3 5,496,733 + Pf6N2E2_4757 0.30 +1.7 5,496,733 + Pf6N2E2_4757 0.30 -0.1 5,496,734 - Pf6N2E2_4757 0.30 +0.4 5,496,902 + Pf6N2E2_4757 0.52 -1.6 5,496,902 + Pf6N2E2_4757 0.52 -0.6 5,496,902 + Pf6N2E2_4757 0.52 +0.6 5,496,903 - Pf6N2E2_4757 0.52 +0.1 5,496,903 - Pf6N2E2_4757 0.52 +0.3 5,496,903 - Pf6N2E2_4757 0.52 +0.4 5,496,982 + Pf6N2E2_4757 0.63 +1.4 5,496,982 + Pf6N2E2_4757 0.63 -1.3 5,496,982 + Pf6N2E2_4757 0.63 +1.2 5,496,982 + Pf6N2E2_4757 0.63 -0.2 5,496,982 + Pf6N2E2_4757 0.63 -1.1 5,496,982 + Pf6N2E2_4757 0.63 +0.1 5,496,982 + Pf6N2E2_4757 0.63 -0.5 5,496,983 - Pf6N2E2_4757 0.63 +0.1 5,496,983 - Pf6N2E2_4757 0.63 +0.5 5,496,983 - Pf6N2E2_4757 0.63 -0.1 5,496,983 - Pf6N2E2_4757 0.63 +0.6 5,497,014 - Pf6N2E2_4757 0.67 +0.6 5,497,146 - Pf6N2E2_4757 0.84 +0.6 5,497,146 - Pf6N2E2_4757 0.84 -0.0 5,497,365 + -0.5 5,497,365 + +1.1 5,497,365 + -1.1 5,497,365 + +0.4 5,497,366 - -0.1 5,497,366 - +0.4 5,497,366 - +0.9 5,497,366 - -0.3
Or see this region's nucleotide sequence