Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4281 and Pf6N2E2_4282 are separated by 32 nucleotides Pf6N2E2_4282 and Pf6N2E2_4283 are separated by 115 nucleotides
Pf6N2E2_4281 - Amino acid ABC transporter, permease protein, at 4,984,676 to 4,985,473
_4281
Pf6N2E2_4282 - Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1), at 4,985,506 to 4,986,327
_4282
Pf6N2E2_4283 - Homocysteine S-methyltransferase (EC 2.1.1.10), at 4,986,443 to 4,987,342
_4283
Position (kb)
4985
4986
4987 Strain fitness (log2 ratio)
-2
-1
0
1 at 4984.596 kb on + strand at 4984.596 kb on + strand at 4984.635 kb on - strand at 4984.635 kb on - strand at 4984.692 kb on + strand at 4984.692 kb on + strand at 4984.693 kb on - strand at 4984.693 kb on - strand at 4984.693 kb on - strand at 4984.693 kb on - strand at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.758 kb on + strand, within Pf6N2E2_4281 at 4984.759 kb on - strand, within Pf6N2E2_4281 at 4984.759 kb on - strand, within Pf6N2E2_4281 at 4984.759 kb on - strand, within Pf6N2E2_4281 at 4984.759 kb on - strand, within Pf6N2E2_4281 at 4984.759 kb on - strand, within Pf6N2E2_4281 at 4984.762 kb on + strand, within Pf6N2E2_4281 at 4984.762 kb on + strand, within Pf6N2E2_4281 at 4984.763 kb on - strand, within Pf6N2E2_4281 at 4984.763 kb on - strand, within Pf6N2E2_4281 at 4984.763 kb on - strand, within Pf6N2E2_4281 at 4984.790 kb on - strand, within Pf6N2E2_4281 at 4984.791 kb on + strand, within Pf6N2E2_4281 at 4984.791 kb on + strand, within Pf6N2E2_4281 at 4984.791 kb on + strand, within Pf6N2E2_4281 at 4984.791 kb on + strand, within Pf6N2E2_4281 at 4984.791 kb on + strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.792 kb on - strand, within Pf6N2E2_4281 at 4984.798 kb on - strand, within Pf6N2E2_4281 at 4984.812 kb on + strand, within Pf6N2E2_4281 at 4984.813 kb on - strand, within Pf6N2E2_4281 at 4984.813 kb on - strand, within Pf6N2E2_4281 at 4985.040 kb on + strand, within Pf6N2E2_4281 at 4985.049 kb on + strand, within Pf6N2E2_4281 at 4985.049 kb on + strand, within Pf6N2E2_4281 at 4985.049 kb on + strand, within Pf6N2E2_4281 at 4985.049 kb on + strand, within Pf6N2E2_4281 at 4985.050 kb on - strand, within Pf6N2E2_4281 at 4985.050 kb on - strand, within Pf6N2E2_4281 at 4985.121 kb on + strand, within Pf6N2E2_4281 at 4985.121 kb on + strand, within Pf6N2E2_4281 at 4985.122 kb on - strand, within Pf6N2E2_4281 at 4985.122 kb on - strand, within Pf6N2E2_4281 at 4985.327 kb on + strand, within Pf6N2E2_4281 at 4985.327 kb on + strand, within Pf6N2E2_4281 at 4985.327 kb on + strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.328 kb on - strand, within Pf6N2E2_4281 at 4985.648 kb on + strand, within Pf6N2E2_4282 at 4985.786 kb on + strand, within Pf6N2E2_4282 at 4985.816 kb on + strand, within Pf6N2E2_4282 at 4985.816 kb on + strand, within Pf6N2E2_4282 at 4985.817 kb on - strand, within Pf6N2E2_4282 at 4985.817 kb on - strand, within Pf6N2E2_4282 at 4985.868 kb on - strand, within Pf6N2E2_4282 at 4985.876 kb on + strand, within Pf6N2E2_4282 at 4985.876 kb on + strand, within Pf6N2E2_4282 at 4985.978 kb on + strand, within Pf6N2E2_4282 at 4985.978 kb on + strand, within Pf6N2E2_4282 at 4985.978 kb on + strand, within Pf6N2E2_4282 at 4985.979 kb on - strand, within Pf6N2E2_4282 at 4985.979 kb on - strand, within Pf6N2E2_4282 at 4985.979 kb on - strand, within Pf6N2E2_4282 at 4985.979 kb on - strand, within Pf6N2E2_4282 at 4985.979 kb on - strand, within Pf6N2E2_4282 at 4985.981 kb on + strand, within Pf6N2E2_4282 at 4985.981 kb on + strand, within Pf6N2E2_4282 at 4985.981 kb on + strand, within Pf6N2E2_4282 at 4985.982 kb on - strand, within Pf6N2E2_4282 at 4985.982 kb on - strand, within Pf6N2E2_4282 at 4986.079 kb on + strand, within Pf6N2E2_4282 at 4986.079 kb on + strand, within Pf6N2E2_4282 at 4986.080 kb on - strand, within Pf6N2E2_4282 at 4986.080 kb on - strand, within Pf6N2E2_4282 at 4986.200 kb on + strand, within Pf6N2E2_4282 at 4986.319 kb on + strand at 4986.319 kb on + strand at 4986.320 kb on - strand at 4986.320 kb on - strand at 4986.320 kb on - strand at 4986.320 kb on - strand at 4986.351 kb on + strand at 4986.352 kb on - strand at 4986.359 kb on - strand at 4986.359 kb on - strand at 4986.380 kb on + strand at 4986.427 kb on + strand at 4986.443 kb on - strand at 4986.565 kb on - strand, within Pf6N2E2_4283 at 4986.584 kb on + strand, within Pf6N2E2_4283 at 4986.585 kb on - strand, within Pf6N2E2_4283 at 4986.585 kb on - strand, within Pf6N2E2_4283 at 4986.585 kb on - strand, within Pf6N2E2_4283 at 4986.585 kb on - strand, within Pf6N2E2_4283 at 4986.623 kb on + strand, within Pf6N2E2_4283 at 4986.623 kb on + strand, within Pf6N2E2_4283 at 4986.623 kb on + strand, within Pf6N2E2_4283 at 4986.624 kb on - strand, within Pf6N2E2_4283 at 4986.624 kb on - strand, within Pf6N2E2_4283 at 4986.624 kb on - strand, within Pf6N2E2_4283 at 4986.624 kb on - strand, within Pf6N2E2_4283 at 4986.624 kb on - strand, within Pf6N2E2_4283 at 4986.643 kb on + strand, within Pf6N2E2_4283 at 4986.883 kb on + strand, within Pf6N2E2_4283 at 4987.235 kb on + strand, within Pf6N2E2_4283 at 4987.236 kb on - strand, within Pf6N2E2_4283 at 4987.312 kb on + strand at 4987.312 kb on + strand at 4987.312 kb on + strand at 4987.312 kb on + strand at 4987.312 kb on + strand at 4987.313 kb on - strand at 4987.313 kb on - strand at 4987.313 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,984,596 + -0.6 4,984,596 + +0.1 4,984,635 - -0.1 4,984,635 - -0.6 4,984,692 + +0.1 4,984,692 + -1.5 4,984,693 - +0.9 4,984,693 - +0.6 4,984,693 - -0.6 4,984,693 - -1.2 4,984,758 + Pf6N2E2_4281 0.10 -0.5 4,984,758 + Pf6N2E2_4281 0.10 +0.0 4,984,758 + Pf6N2E2_4281 0.10 -0.3 4,984,758 + Pf6N2E2_4281 0.10 -1.4 4,984,758 + Pf6N2E2_4281 0.10 +1.1 4,984,758 + Pf6N2E2_4281 0.10 +0.8 4,984,758 + Pf6N2E2_4281 0.10 -0.1 4,984,758 + Pf6N2E2_4281 0.10 -0.1 4,984,759 - Pf6N2E2_4281 0.10 -0.1 4,984,759 - Pf6N2E2_4281 0.10 -0.8 4,984,759 - Pf6N2E2_4281 0.10 +0.8 4,984,759 - Pf6N2E2_4281 0.10 -0.5 4,984,759 - Pf6N2E2_4281 0.10 -2.1 4,984,762 + Pf6N2E2_4281 0.11 +0.6 4,984,762 + Pf6N2E2_4281 0.11 -1.4 4,984,763 - Pf6N2E2_4281 0.11 -1.8 4,984,763 - Pf6N2E2_4281 0.11 -0.1 4,984,763 - Pf6N2E2_4281 0.11 +0.4 4,984,790 - Pf6N2E2_4281 0.14 -0.3 4,984,791 + Pf6N2E2_4281 0.14 +0.5 4,984,791 + Pf6N2E2_4281 0.14 -0.2 4,984,791 + Pf6N2E2_4281 0.14 +0.3 4,984,791 + Pf6N2E2_4281 0.14 +0.6 4,984,791 + Pf6N2E2_4281 0.14 -0.3 4,984,792 - Pf6N2E2_4281 0.15 -0.3 4,984,792 - Pf6N2E2_4281 0.15 -0.3 4,984,792 - Pf6N2E2_4281 0.15 -0.0 4,984,792 - Pf6N2E2_4281 0.15 +0.1 4,984,792 - Pf6N2E2_4281 0.15 +0.8 4,984,792 - Pf6N2E2_4281 0.15 -1.4 4,984,792 - Pf6N2E2_4281 0.15 +0.4 4,984,792 - Pf6N2E2_4281 0.15 +0.3 4,984,792 - Pf6N2E2_4281 0.15 -0.4 4,984,792 - Pf6N2E2_4281 0.15 -1.4 4,984,792 - Pf6N2E2_4281 0.15 +0.1 4,984,792 - Pf6N2E2_4281 0.15 -0.6 4,984,798 - Pf6N2E2_4281 0.15 +0.7 4,984,812 + Pf6N2E2_4281 0.17 -0.1 4,984,813 - Pf6N2E2_4281 0.17 -0.8 4,984,813 - Pf6N2E2_4281 0.17 -1.4 4,985,040 + Pf6N2E2_4281 0.46 -0.5 4,985,049 + Pf6N2E2_4281 0.47 -0.0 4,985,049 + Pf6N2E2_4281 0.47 +0.5 4,985,049 + Pf6N2E2_4281 0.47 +0.1 4,985,049 + Pf6N2E2_4281 0.47 +0.1 4,985,050 - Pf6N2E2_4281 0.47 +0.6 4,985,050 - Pf6N2E2_4281 0.47 +0.8 4,985,121 + Pf6N2E2_4281 0.56 +0.0 4,985,121 + Pf6N2E2_4281 0.56 +0.8 4,985,122 - Pf6N2E2_4281 0.56 +0.2 4,985,122 - Pf6N2E2_4281 0.56 +0.0 4,985,327 + Pf6N2E2_4281 0.82 -0.4 4,985,327 + Pf6N2E2_4281 0.82 +0.3 4,985,327 + Pf6N2E2_4281 0.82 -0.3 4,985,328 - Pf6N2E2_4281 0.82 +0.7 4,985,328 - Pf6N2E2_4281 0.82 +0.5 4,985,328 - Pf6N2E2_4281 0.82 -0.2 4,985,328 - Pf6N2E2_4281 0.82 +0.7 4,985,328 - Pf6N2E2_4281 0.82 -1.1 4,985,328 - Pf6N2E2_4281 0.82 -0.1 4,985,648 + Pf6N2E2_4282 0.17 +0.4 4,985,786 + Pf6N2E2_4282 0.34 -0.1 4,985,816 + Pf6N2E2_4282 0.38 -0.3 4,985,816 + Pf6N2E2_4282 0.38 -1.4 4,985,817 - Pf6N2E2_4282 0.38 -0.3 4,985,817 - Pf6N2E2_4282 0.38 +0.1 4,985,868 - Pf6N2E2_4282 0.44 +0.3 4,985,876 + Pf6N2E2_4282 0.45 +0.1 4,985,876 + Pf6N2E2_4282 0.45 -0.6 4,985,978 + Pf6N2E2_4282 0.57 +0.1 4,985,978 + Pf6N2E2_4282 0.57 -0.5 4,985,978 + Pf6N2E2_4282 0.57 +0.2 4,985,979 - Pf6N2E2_4282 0.58 -0.3 4,985,979 - Pf6N2E2_4282 0.58 +0.7 4,985,979 - Pf6N2E2_4282 0.58 +0.1 4,985,979 - Pf6N2E2_4282 0.58 -0.1 4,985,979 - Pf6N2E2_4282 0.58 +1.0 4,985,981 + Pf6N2E2_4282 0.58 -1.1 4,985,981 + Pf6N2E2_4282 0.58 +0.9 4,985,981 + Pf6N2E2_4282 0.58 +1.0 4,985,982 - Pf6N2E2_4282 0.58 +0.9 4,985,982 - Pf6N2E2_4282 0.58 +0.5 4,986,079 + Pf6N2E2_4282 0.70 +0.3 4,986,079 + Pf6N2E2_4282 0.70 -0.9 4,986,080 - Pf6N2E2_4282 0.70 -1.3 4,986,080 - Pf6N2E2_4282 0.70 +1.1 4,986,200 + Pf6N2E2_4282 0.84 +0.7 4,986,319 + -0.4 4,986,319 + -0.4 4,986,320 - +0.1 4,986,320 - +0.1 4,986,320 - -0.9 4,986,320 - +1.7 4,986,351 + -0.9 4,986,352 - -0.4 4,986,359 - +0.2 4,986,359 - +0.4 4,986,380 + +0.5 4,986,427 + +0.5 4,986,443 - +0.5 4,986,565 - Pf6N2E2_4283 0.14 +1.0 4,986,584 + Pf6N2E2_4283 0.16 +0.3 4,986,585 - Pf6N2E2_4283 0.16 -0.9 4,986,585 - Pf6N2E2_4283 0.16 -0.4 4,986,585 - Pf6N2E2_4283 0.16 +0.9 4,986,585 - Pf6N2E2_4283 0.16 -0.1 4,986,623 + Pf6N2E2_4283 0.20 -0.8 4,986,623 + Pf6N2E2_4283 0.20 +1.0 4,986,623 + Pf6N2E2_4283 0.20 +0.1 4,986,624 - Pf6N2E2_4283 0.20 +0.4 4,986,624 - Pf6N2E2_4283 0.20 -0.5 4,986,624 - Pf6N2E2_4283 0.20 -0.4 4,986,624 - Pf6N2E2_4283 0.20 +0.3 4,986,624 - Pf6N2E2_4283 0.20 +1.4 4,986,643 + Pf6N2E2_4283 0.22 +0.8 4,986,883 + Pf6N2E2_4283 0.49 +0.1 4,987,235 + Pf6N2E2_4283 0.88 +1.2 4,987,236 - Pf6N2E2_4283 0.88 -0.3 4,987,312 + +0.5 4,987,312 + -0.5 4,987,312 + +0.9 4,987,312 + +0.9 4,987,312 + +1.4 4,987,313 - +0.0 4,987,313 - -1.1 4,987,313 - +0.3
Or see this region's nucleotide sequence