Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3530

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
4,114,033	+				+0.4
4,114,033	+				-0.1
4,114,033	+				+0.4
4,114,033	+				-0.2
4,114,033	+				+0.1
4,114,033	+				+0.1
4,114,033	+				+1.7
4,114,033	+				+0.2
4,114,033	+				-1.2
4,114,034	-				+0.3
4,114,034	-				-0.1
4,114,034	-				+0.1
4,114,034	-				-0.0
4,114,074	+				-0.6
4,114,075	-				-0.7
4,114,131	+				-0.3
4,114,132	-				+0.7
4,114,195	+				-1.0
4,114,195	+				+0.7
4,114,195	+				+0.3
4,114,195	+				-0.4
4,114,195	+				+0.3
4,114,196	-				+0.1
4,114,196	-				+0.6
4,114,196	-				+0.2
4,114,196	-				+0.1
4,114,196	-				+1.4
4,114,196	-				+0.6
4,114,196	-				-0.6
4,114,647	-		Pf6N2E2_3529	0.69	-0.3
4,114,647	-		Pf6N2E2_3529	0.69	-0.7
4,114,820	+				-0.8
4,114,821	-				-0.7
4,114,929	-				-0.1
4,114,974	+				+0.8
4,114,974	+				+0.1
4,114,974	+				+0.4
4,114,974	+				+1.4
4,114,974	+				-0.1
4,114,975	-				-0.6
4,114,975	-				+0.3
4,114,975	-				-0.3
4,114,975	-				+0.6
4,114,975	-				+0.3
4,114,975	-				+0.2
4,114,985	+				-0.6
4,114,985	+				+0.5
4,114,985	+				+0.1
4,114,985	+				-1.2
4,114,985	+				-0.1
4,114,986	-				+0.1
4,114,986	-				+0.3
4,114,986	-				+0.3
4,114,986	-				+0.5
4,114,986	-				+0.5
4,115,210	-				+0.6
4,115,240	+				+0.3
4,115,241	-				-0.6
4,115,349	+				-0.2
4,115,349	+				-0.7
4,115,350	-				+0.7
4,115,350	-				+0.4
4,115,459	-		Pf6N2E2_3530	0.10	+0.9
4,115,459	-		Pf6N2E2_3530	0.10	-1.0
4,115,536	-		Pf6N2E2_3530	0.12	-0.3
4,115,541	+		Pf6N2E2_3530	0.12	-1.1
4,115,607	+		Pf6N2E2_3530	0.13	-0.5
4,115,607	+		Pf6N2E2_3530	0.13	+0.4
4,115,608	-		Pf6N2E2_3530	0.13	+0.4
4,115,608	-		Pf6N2E2_3530	0.13	+0.3
4,115,634	+		Pf6N2E2_3530	0.13	-0.2
4,115,635	-		Pf6N2E2_3530	0.13	+0.5
4,115,635	-		Pf6N2E2_3530	0.13	+0.6
4,115,650	-		Pf6N2E2_3530	0.14	-1.1
4,115,703	+		Pf6N2E2_3530	0.15	-0.1
4,115,703	+		Pf6N2E2_3530	0.15	-0.5
4,115,703	+		Pf6N2E2_3530	0.15	+0.2
4,115,704	-		Pf6N2E2_3530	0.15	-0.6
4,115,704	-		Pf6N2E2_3530	0.15	-0.6
4,115,832	-		Pf6N2E2_3530	0.17	-0.8
4,115,832	-		Pf6N2E2_3530	0.17	-0.9
4,115,832	-		Pf6N2E2_3530	0.17	-0.4
4,115,832	-		Pf6N2E2_3530	0.17	-0.1
4,115,832	-		Pf6N2E2_3530	0.17	-0.1
4,115,879	+		Pf6N2E2_3530	0.18	-0.1
4,115,879	+		Pf6N2E2_3530	0.18	+0.5
4,115,880	-		Pf6N2E2_3530	0.18	+0.1
4,115,880	-		Pf6N2E2_3530	0.18	+2.3
4,115,880	-		Pf6N2E2_3530	0.18	+0.6
4,115,965	+		Pf6N2E2_3530	0.19	+0.5
4,115,966	-		Pf6N2E2_3530	0.19	-0.0
4,115,966	-		Pf6N2E2_3530	0.19	+0.3
4,116,061	+		Pf6N2E2_3530	0.21	-0.2
4,116,062	-		Pf6N2E2_3530	0.21	-0.1
4,116,134	+		Pf6N2E2_3530	0.22	-0.1
4,116,134	+		Pf6N2E2_3530	0.22	+0.2
4,116,134	+		Pf6N2E2_3530	0.22	-0.5
4,116,134	+		Pf6N2E2_3530	0.22	-0.5
4,116,183	+		Pf6N2E2_3530	0.23	-0.6
4,116,183	+		Pf6N2E2_3530	0.23	-0.2
4,116,183	+		Pf6N2E2_3530	0.23	-1.3
4,116,183	+		Pf6N2E2_3530	0.23	+0.0
4,116,183	+		Pf6N2E2_3530	0.23	+1.2
4,116,183	+		Pf6N2E2_3530	0.23	-0.1
4,116,184	-		Pf6N2E2_3530	0.23	+0.8
4,116,184	-		Pf6N2E2_3530	0.23	+0.1
4,116,184	-		Pf6N2E2_3530	0.23	-0.2
4,116,184	-		Pf6N2E2_3530	0.23	-0.4
4,116,184	-		Pf6N2E2_3530	0.23	-0.9
4,116,184	-		Pf6N2E2_3530	0.23	-0.6
4,116,309	+		Pf6N2E2_3530	0.25	-0.3
4,116,309	+		Pf6N2E2_3530	0.25	-0.6
4,116,309	+		Pf6N2E2_3530	0.25	-0.1
4,116,309	+		Pf6N2E2_3530	0.25	+0.6
4,116,310	-		Pf6N2E2_3530	0.25	-0.5
4,116,310	-		Pf6N2E2_3530	0.25	+0.8
4,116,310	-		Pf6N2E2_3530	0.25	-0.1
4,116,310	-				+2.4
4,116,310	-		Pf6N2E2_3530	0.25	-0.9
4,116,310	-		Pf6N2E2_3530	0.25	-0.4
4,116,310	-		Pf6N2E2_3530	0.25	+0.8
4,116,310	-		Pf6N2E2_3530	0.25	-0.3
4,116,315	+		Pf6N2E2_3530	0.25	-1.3
4,116,316	-		Pf6N2E2_3530	0.25	+0.2
4,116,348	-		Pf6N2E2_3530	0.26	+0.2
4,116,398	+		Pf6N2E2_3530	0.27	-0.2
4,116,398	+		Pf6N2E2_3530	0.27	+0.2
4,116,398	+		Pf6N2E2_3530	0.27	+0.4
4,116,398	+		Pf6N2E2_3530	0.27	-0.1
4,116,399	-		Pf6N2E2_3530	0.27	-0.9
4,116,415	+		Pf6N2E2_3530	0.27	+0.4
4,116,416	-		Pf6N2E2_3530	0.27	-0.5
4,116,429	+		Pf6N2E2_3530	0.27	+1.2
4,116,615	-		Pf6N2E2_3530	0.30	+0.2
4,116,750	+		Pf6N2E2_3530	0.33	+1.1
4,116,846	+		Pf6N2E2_3530	0.34	+0.2
4,116,846	+		Pf6N2E2_3530	0.34	-0.5
4,116,846	+		Pf6N2E2_3530	0.34	-0.4
4,116,847	-		Pf6N2E2_3530	0.35	-1.1
4,116,847	-		Pf6N2E2_3530	0.35	-1.1
4,116,847	-		Pf6N2E2_3530	0.35	+0.5
4,116,847	-		Pf6N2E2_3530	0.35	+0.8
4,117,032	+		Pf6N2E2_3530	0.38	-0.2
4,117,032	+		Pf6N2E2_3530	0.38	-0.5
4,117,032	+		Pf6N2E2_3530	0.38	-0.9
4,117,041	+		Pf6N2E2_3530	0.38	+1.1
4,117,041	+		Pf6N2E2_3530	0.38	-0.1
4,117,041	+		Pf6N2E2_3530	0.38	-0.4
4,117,041	+		Pf6N2E2_3530	0.38	+0.2
4,117,042	-		Pf6N2E2_3530	0.38	+0.8
4,117,042	-		Pf6N2E2_3530	0.38	-0.6
4,117,042	-		Pf6N2E2_3530	0.38	-0.6
4,117,042	-		Pf6N2E2_3530	0.38	+0.7
4,117,042	-		Pf6N2E2_3530	0.38	-0.8
4,117,118	+		Pf6N2E2_3530	0.39	-0.4
4,117,306	-		Pf6N2E2_3530	0.42	-0.3
4,117,574	+		Pf6N2E2_3530	0.47	+1.0
4,117,574	+		Pf6N2E2_3530	0.47	-0.6
4,117,574	+		Pf6N2E2_3530	0.47	+0.2
4,117,574	+		Pf6N2E2_3530	0.47	+0.6
4,117,575	-		Pf6N2E2_3530	0.47	-0.3
4,117,575	-		Pf6N2E2_3530	0.47	-0.6
4,117,575	-		Pf6N2E2_3530	0.47	+0.0
4,117,642	-		Pf6N2E2_3530	0.48	+0.9
4,117,642	-		Pf6N2E2_3530	0.48	+0.1
4,117,746	+		Pf6N2E2_3530	0.50	-0.7
4,117,746	+		Pf6N2E2_3530	0.50	+0.8
4,117,746	+		Pf6N2E2_3530	0.50	+0.1
4,117,746	+		Pf6N2E2_3530	0.50	+0.2
4,117,747	-		Pf6N2E2_3530	0.50	+0.4
4,117,747	-		Pf6N2E2_3530	0.50	+0.7
4,117,747	-		Pf6N2E2_3530	0.50	-1.4
4,117,747	-		Pf6N2E2_3530	0.50	+0.2
4,117,755	+		Pf6N2E2_3530	0.50	-0.8
4,117,755	+		Pf6N2E2_3530	0.50	-0.1
4,117,755	+		Pf6N2E2_3530	0.50	-0.6
4,117,755	+		Pf6N2E2_3530	0.50	-0.3
4,118,059	-		Pf6N2E2_3530	0.56	-0.3
4,118,152	+		Pf6N2E2_3530	0.57	+1.4
4,118,152	+		Pf6N2E2_3530	0.57	-0.1
4,118,153	-		Pf6N2E2_3530	0.57	+0.4
4,118,153	-		Pf6N2E2_3530	0.57	+0.8
4,118,613	+		Pf6N2E2_3530	0.65	+0.2
4,118,613	+		Pf6N2E2_3530	0.65	-0.2
4,118,613	+		Pf6N2E2_3530	0.65	-0.4
4,118,614	-		Pf6N2E2_3530	0.65	-0.2
4,118,614	-		Pf6N2E2_3530	0.65	-0.1
4,118,765	+		Pf6N2E2_3530	0.68	-0.1
4,118,765	+		Pf6N2E2_3530	0.68	-0.0
4,118,765	+		Pf6N2E2_3530	0.68	-0.6
4,118,765	+		Pf6N2E2_3530	0.68	+0.5
4,118,765	+		Pf6N2E2_3530	0.68	-0.5
4,118,765	+		Pf6N2E2_3530	0.68	+0.4
4,118,765	+		Pf6N2E2_3530	0.68	+0.6
4,118,765	+		Pf6N2E2_3530	0.68	-0.2
4,118,765	+		Pf6N2E2_3530	0.68	-0.1
4,118,766	-		Pf6N2E2_3530	0.68	-0.0
4,118,766	-		Pf6N2E2_3530	0.68	+0.9
4,118,766	-		Pf6N2E2_3530	0.68	+0.5
4,118,766	-		Pf6N2E2_3530	0.68	+0.8
4,118,766	-		Pf6N2E2_3530	0.68	+0.2
4,118,766	-		Pf6N2E2_3530	0.68	-0.9
4,118,766	-		Pf6N2E2_3530	0.68	-1.3
4,118,766	-		Pf6N2E2_3530	0.68	-0.6
4,118,766	-		Pf6N2E2_3530	0.68	+1.3
4,118,766	-		Pf6N2E2_3530	0.68	+0.8
4,118,818	-		Pf6N2E2_3530	0.69	+0.5
4,118,836	+		Pf6N2E2_3530	0.69	+0.4
4,118,836	+		Pf6N2E2_3530	0.69	+0.5
4,118,836	+		Pf6N2E2_3530	0.69	-0.1
4,118,836	+		Pf6N2E2_3530	0.69	-0.4
4,118,837	-		Pf6N2E2_3530	0.69	-0.7
4,119,081	+		Pf6N2E2_3530	0.73	+1.1
4,119,081	+		Pf6N2E2_3530	0.73	+0.2
4,119,082	-		Pf6N2E2_3530	0.73	+0.5
4,119,082	-		Pf6N2E2_3530	0.73	-0.6
4,119,120	+		Pf6N2E2_3530	0.74	-0.1
4,119,120	+		Pf6N2E2_3530	0.74	+0.6
4,119,120	+		Pf6N2E2_3530	0.74	-0.3
4,119,120	+		Pf6N2E2_3530	0.74	+0.2
4,119,120	+		Pf6N2E2_3530	0.74	+0.1
4,119,120	+		Pf6N2E2_3530	0.74	-1.0
4,119,123	+		Pf6N2E2_3530	0.74	-0.1
4,119,248	+		Pf6N2E2_3530	0.76	-1.0
4,119,249	-		Pf6N2E2_3530	0.76	-1.1
4,119,300	+		Pf6N2E2_3530	0.77	-0.4
4,119,300	+		Pf6N2E2_3530	0.77	-0.2
4,119,470	-		Pf6N2E2_3530	0.80	+0.3
4,119,519	+		Pf6N2E2_3530	0.81	-0.1
4,119,519	+		Pf6N2E2_3530	0.81	-0.2
4,119,528	+		Pf6N2E2_3530	0.81	+1.8
4,119,528	+		Pf6N2E2_3530	0.81	-1.5
4,119,529	-		Pf6N2E2_3530	0.81	-0.2
4,119,532	+		Pf6N2E2_3530	0.81	+0.1
4,119,533	-		Pf6N2E2_3530	0.81	-1.1
4,119,533	-		Pf6N2E2_3530	0.81	+0.5
4,119,584	+		Pf6N2E2_3530	0.82	-0.5
4,119,584	+		Pf6N2E2_3530	0.82	+0.4
4,119,681	+		Pf6N2E2_3530	0.84	+0.3
4,119,681	+		Pf6N2E2_3530	0.84	-0.2
4,119,768	+		Pf6N2E2_3530	0.85	+0.8
4,119,769	-		Pf6N2E2_3530	0.85	-0.8
4,119,769	-		Pf6N2E2_3530	0.85	-0.1
4,119,900	+		Pf6N2E2_3530	0.88	+0.4
4,119,901	-				+0.9
4,119,968	-		Pf6N2E2_3530	0.89	-0.3
4,119,976	-		Pf6N2E2_3530	0.89	-0.4
4,119,976	-		Pf6N2E2_3530	0.89	+0.7
4,119,976	-		Pf6N2E2_3530	0.89	+0.5
4,120,108	-				-0.3
4,120,132	-				-1.6
4,120,132	-				+0.8
4,120,132	-				+1.3
4,120,132	-				+0.0
4,120,188	+				+0.1
4,120,189	-				+2.7
4,120,189	-				+0.6
4,120,189	-				-0.7
4,120,283	-				-1.5
4,120,311	-				+0.9
4,120,321	-				-0.3
4,120,321	-				-0.4
4,120,321	-				+0.3
4,120,370	-				+0.1
4,120,370	-				+0.1
4,120,425	-				-0.2
4,120,462	+				-1.4
4,120,494	+				-0.4
4,120,494	+				+0.5
4,120,494	+				+0.8
4,120,541	-				-0.2
4,120,541	-				+0.2
4,120,570	-				-0.4
4,120,620	+				+0.8
4,120,625	+				+0.5
4,120,625	+				+0.6
4,120,629	+				+0.4
4,120,629	+				+0.4
4,120,630	-				+0.3
4,120,774	+				+0.4
4,120,775	-				-1.0
4,120,840	-				+0.7
4,120,842	+				+0.9
4,120,908	+				+0.4
4,120,908	+				+0.6
4,120,909	-				+0.7
4,120,921	+				+0.4
4,120,922	-				+0.1
4,120,922	-				-0.4
4,120,922	-				-0.1
4,120,925	-				+0.5
4,121,036	+				-0.5
4,121,037	-				+0.0
4,121,059	+				-1.2
4,121,059	+				+0.7
4,121,060	-				-0.3
4,121,299	+		Pf6N2E2_3531	0.16	-0.2
4,121,299	+		Pf6N2E2_3531	0.16	+0.9
4,121,299	+		Pf6N2E2_3531	0.16	+0.3
4,121,299	+		Pf6N2E2_3531	0.16	-0.2
4,121,299	+		Pf6N2E2_3531	0.16	-0.6