Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3435

Experiment: LB no stress 48 hours

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB no stress 48 hours
3,994,611	-		Pf6N2E2_3434	0.65	-0.5
3,994,659	+		Pf6N2E2_3434	0.67	-0.1
3,994,659	+		Pf6N2E2_3434	0.67	-0.1
3,994,694	+		Pf6N2E2_3434	0.68	-0.1
3,994,695	-		Pf6N2E2_3434	0.68	-0.1
3,994,695	-		Pf6N2E2_3434	0.68	+0.5
3,994,695	-		Pf6N2E2_3434	0.68	-1.4
3,994,913	-		Pf6N2E2_3434	0.77	+0.3
3,994,913	-		Pf6N2E2_3434	0.77	+0.3
3,994,913	-		Pf6N2E2_3434	0.77	-0.9
3,995,080	-		Pf6N2E2_3434	0.84	-0.7
3,995,138	+		Pf6N2E2_3434	0.86	+0.5
3,995,139	-		Pf6N2E2_3434	0.86	-0.2
3,995,200	+		Pf6N2E2_3434	0.88	-0.7
3,995,200	+		Pf6N2E2_3434	0.88	+0.2
3,995,201	-		Pf6N2E2_3434	0.88	+0.4
3,995,254	-				+0.7
3,995,527	+				+0.3
3,995,527	+				+0.2
3,995,528	-				+1.2
3,995,588	+				+0.6
3,995,588	+				+0.0
3,995,589	-				+1.5
3,995,679	+				-1.1
3,995,680	-				-0.4
3,995,680	-				+0.7
3,995,680	-				+0.7
3,995,741	+				-1.6
3,995,741	+				+0.7
3,995,742	-				+0.5
3,995,742	-				+0.9
3,995,838	-				+1.2
3,995,838	-				+0.1
3,995,870	+				+0.7
3,995,884	-				+0.0
3,995,885	+				-0.1
3,995,885	+				+0.3
3,995,886	-				+1.1
3,995,997	-		Pf6N2E2_3435	0.10	-1.0
3,996,045	-		Pf6N2E2_3435	0.11	-0.6
3,996,078	-		Pf6N2E2_3435	0.12	+0.1
3,996,078	-		Pf6N2E2_3435	0.12	+0.4
3,996,081	-		Pf6N2E2_3435	0.12	-0.1
3,996,081	-		Pf6N2E2_3435	0.12	-0.5
3,996,081	-		Pf6N2E2_3435	0.12	-0.5
3,996,113	+		Pf6N2E2_3435	0.13	-0.1
3,996,114	-		Pf6N2E2_3435	0.13	+0.0
3,996,114	-		Pf6N2E2_3435	0.13	-0.9
3,996,393	+		Pf6N2E2_3435	0.19	-0.3
3,996,394	-		Pf6N2E2_3435	0.19	-0.4
3,996,394	-		Pf6N2E2_3435	0.19	+0.2
3,996,454	-		Pf6N2E2_3435	0.20	-0.5
3,996,634	+		Pf6N2E2_3435	0.24	+0.3
3,996,635	-		Pf6N2E2_3435	0.24	+0.1
3,996,635	-		Pf6N2E2_3435	0.24	-1.2
3,996,635	-		Pf6N2E2_3435	0.24	-0.1
3,996,635	-		Pf6N2E2_3435	0.24	+0.1
3,996,722	+		Pf6N2E2_3435	0.26	+1.7
3,996,766	+		Pf6N2E2_3435	0.27	-1.4
3,996,767	-		Pf6N2E2_3435	0.27	-1.4
3,996,824	-		Pf6N2E2_3435	0.28	-0.9
3,996,824	-		Pf6N2E2_3435	0.28	+0.7
3,996,916	+		Pf6N2E2_3435	0.30	-0.1
3,996,953	-		Pf6N2E2_3435	0.31	-0.1
3,996,953	-		Pf6N2E2_3435	0.31	+0.1
3,996,970	+		Pf6N2E2_3435	0.31	+2.9
3,997,005	-		Pf6N2E2_3435	0.32	-1.6
3,997,006	+		Pf6N2E2_3435	0.32	-0.1
3,997,007	-		Pf6N2E2_3435	0.32	-0.4
3,997,007	-		Pf6N2E2_3435	0.32	+0.3
3,997,067	+		Pf6N2E2_3435	0.33	-2.0
3,997,067	+		Pf6N2E2_3435	0.33	+0.8
3,997,067	+		Pf6N2E2_3435	0.33	-0.7
3,997,068	-		Pf6N2E2_3435	0.34	+0.5
3,997,068	-		Pf6N2E2_3435	0.34	-0.9
3,997,068	-		Pf6N2E2_3435	0.34	-0.3
3,997,068	-		Pf6N2E2_3435	0.34	+0.3
3,997,071	+		Pf6N2E2_3435	0.34	-0.5
3,997,071	+		Pf6N2E2_3435	0.34	-0.7
3,997,072	-		Pf6N2E2_3435	0.34	+0.4
3,997,072	-		Pf6N2E2_3435	0.34	+0.9
3,997,072	-		Pf6N2E2_3435	0.34	-0.2
3,997,072	-		Pf6N2E2_3435	0.34	-0.4
3,997,072	-		Pf6N2E2_3435	0.34	-0.2
3,997,101	+		Pf6N2E2_3435	0.34	-0.5
3,997,101	+		Pf6N2E2_3435	0.34	+0.3
3,997,102	-		Pf6N2E2_3435	0.34	-0.1
3,997,156	+		Pf6N2E2_3435	0.35	+0.6
3,997,156	+		Pf6N2E2_3435	0.35	+0.9
3,997,156	+		Pf6N2E2_3435	0.35	+0.1
3,997,157	-		Pf6N2E2_3435	0.35	-0.9
3,997,157	-		Pf6N2E2_3435	0.35	+0.5
3,997,157	-		Pf6N2E2_3435	0.35	+0.4
3,997,157	-		Pf6N2E2_3435	0.35	-0.9
3,997,157	-		Pf6N2E2_3435	0.35	-0.3
3,997,289	+		Pf6N2E2_3435	0.38	+0.6
3,997,289	+		Pf6N2E2_3435	0.38	-0.9
3,997,290	-		Pf6N2E2_3435	0.38	+0.3
3,997,290	-		Pf6N2E2_3435	0.38	+0.9
3,997,290	-		Pf6N2E2_3435	0.38	-0.4
3,997,290	-		Pf6N2E2_3435	0.38	-0.1
3,997,290	-		Pf6N2E2_3435	0.38	+0.1
3,997,391	+		Pf6N2E2_3435	0.41	-1.2
3,997,392	-		Pf6N2E2_3435	0.41	-0.7
3,997,392	-		Pf6N2E2_3435	0.41	+0.1
3,997,392	-		Pf6N2E2_3435	0.41	+0.7
3,997,392	-		Pf6N2E2_3435	0.41	-0.3
3,997,439	+		Pf6N2E2_3435	0.42	-1.4
3,997,439	+		Pf6N2E2_3435	0.42	-0.0
3,997,439	+		Pf6N2E2_3435	0.42	+0.5
3,997,440	-		Pf6N2E2_3435	0.42	-0.1
3,997,440	-		Pf6N2E2_3435	0.42	-0.4
3,997,440	-		Pf6N2E2_3435	0.42	+0.5
3,997,459	-		Pf6N2E2_3435	0.42	-0.5
3,997,658	-		Pf6N2E2_3435	0.46	-0.0
3,997,658	-		Pf6N2E2_3435	0.46	-0.3
3,997,658	-		Pf6N2E2_3435	0.46	+0.7
3,997,665	+		Pf6N2E2_3435	0.46	+1.2
3,997,666	-		Pf6N2E2_3435	0.47	+0.1
3,997,774	-		Pf6N2E2_3435	0.49	-0.9
3,997,774	-		Pf6N2E2_3435	0.49	+0.1
3,997,774	-		Pf6N2E2_3435	0.49	+0.3
3,997,910	+		Pf6N2E2_3435	0.52	-0.1
3,997,911	-		Pf6N2E2_3435	0.52	+0.7
3,997,932	-		Pf6N2E2_3435	0.52	-0.1
3,997,932	-		Pf6N2E2_3435	0.52	-0.1
3,997,935	+		Pf6N2E2_3435	0.52	-0.3
3,997,936	-		Pf6N2E2_3435	0.52	-0.5
3,997,959	+		Pf6N2E2_3435	0.53	+0.6
3,997,976	+		Pf6N2E2_3435	0.53	+0.0
3,998,003	+		Pf6N2E2_3435	0.54	+0.3
3,998,004	-		Pf6N2E2_3435	0.54	-1.0
3,998,068	+		Pf6N2E2_3435	0.55	-0.1
3,998,069	-		Pf6N2E2_3435	0.55	-0.9
3,998,069	-		Pf6N2E2_3435	0.55	-0.4
3,998,069	-		Pf6N2E2_3435	0.55	-0.1
3,998,069	-		Pf6N2E2_3435	0.55	-0.1
3,998,078	+		Pf6N2E2_3435	0.55	+0.3
3,998,079	-		Pf6N2E2_3435	0.56	+0.8
3,998,151	-		Pf6N2E2_3435	0.57	-0.1
3,998,159	+		Pf6N2E2_3435	0.57	+0.8
3,998,235	+		Pf6N2E2_3435	0.59	-0.3
3,998,235	+		Pf6N2E2_3435	0.59	+0.9
3,998,235	+		Pf6N2E2_3435	0.59	+0.0
3,998,235	+		Pf6N2E2_3435	0.59	-0.1
3,998,235	+		Pf6N2E2_3435	0.59	+0.3
3,998,235	+		Pf6N2E2_3435	0.59	+0.4
3,998,235	+		Pf6N2E2_3435	0.59	+0.4
3,998,236	-		Pf6N2E2_3435	0.59	+0.1
3,998,236	-		Pf6N2E2_3435	0.59	+0.5
3,998,236	-		Pf6N2E2_3435	0.59	+0.8
3,998,236	-		Pf6N2E2_3435	0.59	-0.6
3,998,240	+		Pf6N2E2_3435	0.59	-0.3
3,998,240	+		Pf6N2E2_3435	0.59	+0.6
3,998,240	+		Pf6N2E2_3435	0.59	+0.7
3,998,240	+		Pf6N2E2_3435	0.59	-1.0
3,998,241	-		Pf6N2E2_3435	0.59	-0.6
3,998,241	-		Pf6N2E2_3435	0.59	+0.3
3,998,241	-		Pf6N2E2_3435	0.59	-0.9
3,998,245	-		Pf6N2E2_3435	0.59	-0.1
3,998,259	+		Pf6N2E2_3435	0.59	+0.1
3,998,510	+		Pf6N2E2_3435	0.65	-0.8
3,998,510	+		Pf6N2E2_3435	0.65	+1.1
3,998,511	-		Pf6N2E2_3435	0.65	-0.4
3,998,511	-		Pf6N2E2_3435	0.65	+1.1
3,998,525	-		Pf6N2E2_3435	0.65	+0.3
3,998,663	+		Pf6N2E2_3435	0.68	-0.8
3,998,664	-		Pf6N2E2_3435	0.68	-1.7
3,998,664	-		Pf6N2E2_3435	0.68	-0.6
3,998,664	-		Pf6N2E2_3435	0.68	-0.3
3,998,664	-		Pf6N2E2_3435	0.68	+0.7
3,998,885	-		Pf6N2E2_3435	0.73	-0.6
3,998,906	+		Pf6N2E2_3435	0.73	-0.4
3,998,906	+		Pf6N2E2_3435	0.73	-0.1
3,998,906	+		Pf6N2E2_3435	0.73	+0.5
3,998,907	-		Pf6N2E2_3435	0.74	-0.3
3,998,907	-		Pf6N2E2_3435	0.74	-0.0
3,998,909	+		Pf6N2E2_3435	0.74	+0.1
3,998,909	+		Pf6N2E2_3435	0.74	+0.8
3,998,966	+		Pf6N2E2_3435	0.75	+0.1
3,998,966	+		Pf6N2E2_3435	0.75	-0.1
3,998,967	-		Pf6N2E2_3435	0.75	+1.5
3,999,028	-		Pf6N2E2_3435	0.76	-0.3
3,999,326	+		Pf6N2E2_3435	0.83	-0.2
3,999,327	-		Pf6N2E2_3435	0.83	-2.0
3,999,350	-		Pf6N2E2_3435	0.83	-1.2
3,999,365	+		Pf6N2E2_3435	0.83	+0.2
3,999,399	-		Pf6N2E2_3435	0.84	-0.1
3,999,458	+		Pf6N2E2_3435	0.86	-0.2
3,999,515	+		Pf6N2E2_3435	0.87	+1.0
3,999,515	+		Pf6N2E2_3435	0.87	+1.0
3,999,515	+		Pf6N2E2_3435	0.87	-0.1
3,999,576	-		Pf6N2E2_3435	0.88	+0.1
3,999,576	-		Pf6N2E2_3435	0.88	-0.5
3,999,576	-		Pf6N2E2_3435	0.88	+0.4
3,999,661	+		Pf6N2E2_3435	0.90	-0.2
3,999,746	+				-3.0
3,999,747	-				+0.1
3,999,764	+				+0.0
3,999,765	-				-0.4
4,000,091	+				-1.2
4,000,234	+				+0.4
4,000,388	-				+0.3
4,000,388	-				+0.1
4,000,388	-				-0.4
4,000,389	+				-0.2
4,000,484	-				+0.5
4,000,510	+				-0.1
4,000,510	+				-0.3
4,000,525	+				+0.1
4,000,564	+				-0.6
4,000,564	+				-0.4
4,000,604	+		Pf6N2E2_3436	0.11	-0.4
4,000,604	+		Pf6N2E2_3436	0.11	+0.6
4,000,604	+		Pf6N2E2_3436	0.11	+0.1
4,000,605	-		Pf6N2E2_3436	0.11	+0.3
4,000,605	-		Pf6N2E2_3436	0.11	+0.1
4,000,605	-		Pf6N2E2_3436	0.11	+0.1
4,000,631	+		Pf6N2E2_3436	0.11	-0.2
4,000,744	+		Pf6N2E2_3436	0.14	+0.8
4,000,745	-		Pf6N2E2_3436	0.14	+0.3
4,000,789	+		Pf6N2E2_3436	0.15	+1.0
4,000,819	+		Pf6N2E2_3436	0.16	+0.1
4,000,900	+		Pf6N2E2_3436	0.17	+0.1
4,000,900	+		Pf6N2E2_3436	0.17	+0.4
4,000,918	+		Pf6N2E2_3436	0.18	+0.6
4,000,918	+		Pf6N2E2_3436	0.18	-0.7
4,000,918	+		Pf6N2E2_3436	0.18	+0.2
4,000,918	+		Pf6N2E2_3436	0.18	-0.1
4,000,918	+		Pf6N2E2_3436	0.18	+0.1
4,000,918	+		Pf6N2E2_3436	0.18	-0.5
4,000,918	+		Pf6N2E2_3436	0.18	-0.3
4,001,009	+		Pf6N2E2_3436	0.20	+0.6
4,001,010	-		Pf6N2E2_3436	0.20	-0.2
4,001,013	-		Pf6N2E2_3436	0.20	+0.1
4,001,013	-		Pf6N2E2_3436	0.20	-0.1
4,001,013	-		Pf6N2E2_3436	0.20	+0.4