Experiment: LB no stress 24 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4961 and Pf6N2E2_4962 are separated by 11 nucleotides
Pf6N2E2_4961 - Threonine synthase (EC 4.2.3.1), at 5,721,252 to 5,722,616
_4961
Pf6N2E2_4962 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 5,722,628 to 5,723,065
_4962
Position (kb)
5722
5723
5724 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5721.741 kb on + strand, within Pf6N2E2_4961 at 5721.742 kb on - strand, within Pf6N2E2_4961 at 5721.933 kb on + strand, within Pf6N2E2_4961 at 5721.933 kb on + strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.015 kb on - strand, within Pf6N2E2_4961 at 5722.015 kb on - strand, within Pf6N2E2_4961 at 5722.117 kb on - strand, within Pf6N2E2_4961 at 5722.203 kb on + strand, within Pf6N2E2_4961 at 5722.203 kb on + strand, within Pf6N2E2_4961 at 5722.314 kb on + strand, within Pf6N2E2_4961 at 5722.315 kb on - strand, within Pf6N2E2_4961 at 5722.423 kb on - strand, within Pf6N2E2_4961 at 5722.787 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5723.178 kb on + strand at 5723.178 kb on + strand at 5723.499 kb on + strand at 5723.499 kb on + strand at 5723.818 kb on + strand at 5723.818 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5724.009 kb on + strand at 5724.009 kb on + strand at 5724.009 kb on + strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 24 hours remove 5,721,741 + Pf6N2E2_4961 0.36 -0.5 5,721,742 - Pf6N2E2_4961 0.36 -0.3 5,721,933 + Pf6N2E2_4961 0.50 -0.6 5,721,933 + Pf6N2E2_4961 0.50 -0.0 5,721,934 - Pf6N2E2_4961 0.50 -1.3 5,721,934 - Pf6N2E2_4961 0.50 +1.0 5,721,934 - Pf6N2E2_4961 0.50 +0.6 5,722,014 + Pf6N2E2_4961 0.56 -0.2 5,722,014 + Pf6N2E2_4961 0.56 +0.4 5,722,014 + Pf6N2E2_4961 0.56 -0.3 5,722,015 - Pf6N2E2_4961 0.56 +1.3 5,722,015 - Pf6N2E2_4961 0.56 +3.0 5,722,117 - Pf6N2E2_4961 0.63 +0.5 5,722,203 + Pf6N2E2_4961 0.70 +0.4 5,722,203 + Pf6N2E2_4961 0.70 +0.0 5,722,314 + Pf6N2E2_4961 0.78 -0.0 5,722,315 - Pf6N2E2_4961 0.78 -0.4 5,722,423 - Pf6N2E2_4961 0.86 +0.1 5,722,787 + Pf6N2E2_4962 0.36 -2.0 5,722,987 + Pf6N2E2_4962 0.82 -1.8 5,722,987 + Pf6N2E2_4962 0.82 -0.9 5,722,987 + Pf6N2E2_4962 0.82 +0.4 5,722,988 - Pf6N2E2_4962 0.82 -0.3 5,722,988 - Pf6N2E2_4962 0.82 -0.8 5,722,988 - Pf6N2E2_4962 0.82 +0.9 5,723,178 + +0.1 5,723,178 + +0.4 5,723,499 + +0.0 5,723,499 + +0.4 5,723,818 + +0.4 5,723,818 + +0.2 5,723,989 + +0.1 5,723,989 + +0.8 5,723,989 + -0.8 5,723,989 + +0.2 5,723,989 + -0.1 5,723,989 + +0.1 5,723,989 + +0.2 5,723,990 - +0.9 5,723,990 - -0.1 5,723,990 - -0.1 5,723,990 - +0.7 5,724,009 + -0.0 5,724,009 + -0.2 5,724,009 + +0.5 5,724,010 - +1.1 5,724,010 - -0.6 5,724,010 - +0.6 5,724,010 - +0.3 5,724,010 - -0.5
Or see this region's nucleotide sequence