Experiment: perchlorate 0.00625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_661 and Pf6N2E2_662 are separated by 242 nucleotides Pf6N2E2_662 and Pf6N2E2_663 are separated by 4 nucleotides Pf6N2E2_663 and Pf6N2E2_664 are separated by 342 nucleotides
Pf6N2E2_661 - DipZ protein, at 764,968 to 766,179
_661
Pf6N2E2_662 - Valyl-tRNA synthetase, at 766,422 to 766,739
_662
Pf6N2E2_663 - Transcriptional activator of acetoin dehydrogenase operon AcoR, at 766,744 to 768,609
_663
Pf6N2E2_664 - Acetoin catabolism protein X, at 768,952 to 770,025
_664
Position (kb) 766
767
768
769 Strain fitness (log2 ratio) -1
0
1
2 at 765.835 kb on + strand, within Pf6N2E2_661 at 765.835 kb on + strand, within Pf6N2E2_661 at 765.836 kb on - strand, within Pf6N2E2_661 at 765.868 kb on + strand, within Pf6N2E2_661 at 765.869 kb on - strand, within Pf6N2E2_661 at 765.937 kb on + strand, within Pf6N2E2_661 at 765.977 kb on + strand, within Pf6N2E2_661 at 765.998 kb on - strand, within Pf6N2E2_661 at 766.051 kb on + strand, within Pf6N2E2_661 at 766.066 kb on + strand at 766.067 kb on - strand at 766.321 kb on + strand at 766.570 kb on - strand, within Pf6N2E2_662 at 766.653 kb on + strand, within Pf6N2E2_662 at 766.653 kb on + strand, within Pf6N2E2_662 at 766.654 kb on - strand, within Pf6N2E2_662 at 766.654 kb on - strand, within Pf6N2E2_662 at 766.654 kb on - strand, within Pf6N2E2_662 at 766.698 kb on + strand, within Pf6N2E2_662 at 766.698 kb on + strand, within Pf6N2E2_662 at 766.698 kb on + strand, within Pf6N2E2_662 at 766.699 kb on - strand, within Pf6N2E2_662 at 766.701 kb on + strand, within Pf6N2E2_662 at 766.701 kb on + strand, within Pf6N2E2_662 at 766.702 kb on - strand, within Pf6N2E2_662 at 766.702 kb on - strand, within Pf6N2E2_662 at 766.738 kb on - strand at 767.192 kb on + strand, within Pf6N2E2_663 at 767.193 kb on - strand, within Pf6N2E2_663 at 767.841 kb on - strand, within Pf6N2E2_663 at 768.248 kb on + strand, within Pf6N2E2_663 at 768.609 kb on + strand at 768.610 kb on - strand at 768.649 kb on + strand at 768.887 kb on - strand at 768.887 kb on - strand at 768.890 kb on - strand at 768.904 kb on + strand at 768.905 kb on - strand at 768.905 kb on - strand at 769.432 kb on + strand, within Pf6N2E2_664 at 769.433 kb on - strand, within Pf6N2E2_664 at 769.433 kb on - strand, within Pf6N2E2_664
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 0.00625 M remove 765,835 + Pf6N2E2_661 0.72 +0.4 765,835 + Pf6N2E2_661 0.72 +0.0 765,836 - Pf6N2E2_661 0.72 -0.0 765,868 + Pf6N2E2_661 0.74 -0.2 765,869 - Pf6N2E2_661 0.74 +0.4 765,937 + Pf6N2E2_661 0.80 -0.3 765,977 + Pf6N2E2_661 0.83 -0.1 765,998 - Pf6N2E2_661 0.85 +0.7 766,051 + Pf6N2E2_661 0.89 -0.3 766,066 + +0.4 766,067 - +0.2 766,321 + -0.0 766,570 - Pf6N2E2_662 0.47 +0.1 766,653 + Pf6N2E2_662 0.73 -1.2 766,653 + Pf6N2E2_662 0.73 +0.8 766,654 - Pf6N2E2_662 0.73 +0.7 766,654 - Pf6N2E2_662 0.73 -0.5 766,654 - Pf6N2E2_662 0.73 -0.4 766,698 + Pf6N2E2_662 0.87 -0.6 766,698 + Pf6N2E2_662 0.87 +0.1 766,698 + Pf6N2E2_662 0.87 +0.4 766,699 - Pf6N2E2_662 0.87 +0.4 766,701 + Pf6N2E2_662 0.88 -0.1 766,701 + Pf6N2E2_662 0.88 -1.3 766,702 - Pf6N2E2_662 0.88 +1.9 766,702 - Pf6N2E2_662 0.88 +0.1 766,738 - -0.1 767,192 + Pf6N2E2_663 0.24 -0.2 767,193 - Pf6N2E2_663 0.24 -0.3 767,841 - Pf6N2E2_663 0.59 -0.2 768,248 + Pf6N2E2_663 0.81 -1.0 768,609 + +0.5 768,610 - +1.1 768,649 + -0.8 768,887 - -1.4 768,887 - +0.1 768,890 - -0.4 768,904 + +0.7 768,905 - -0.4 768,905 - -0.5 769,432 + Pf6N2E2_664 0.45 -0.3 769,433 - Pf6N2E2_664 0.45 +0.4 769,433 - Pf6N2E2_664 0.45 -0.7
Or see this region's nucleotide sequence