Experiment: perchlorate 0.00625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_299 and Pf6N2E2_300 overlap by 4 nucleotides Pf6N2E2_300 and Pf6N2E2_301 are separated by 12 nucleotides
Pf6N2E2_299 - FIG065221: Holliday junction DNA helicase, at 369,402 to 370,727
_299
Pf6N2E2_300 - CrcB protein, at 370,724 to 371,101
_300
Pf6N2E2_301 - Seryl-tRNA synthetase (EC 6.1.1.11), at 371,114 to 372,394
_301
Position (kb) 370
371
372 Strain fitness (log2 ratio) -2
-1
0
1 at 369.780 kb on + strand, within Pf6N2E2_299 at 369.780 kb on + strand, within Pf6N2E2_299 at 369.873 kb on + strand, within Pf6N2E2_299 at 369.873 kb on + strand, within Pf6N2E2_299 at 369.873 kb on + strand, within Pf6N2E2_299 at 369.873 kb on + strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 369.874 kb on - strand, within Pf6N2E2_299 at 370.207 kb on - strand, within Pf6N2E2_299 at 370.248 kb on + strand, within Pf6N2E2_299 at 370.248 kb on + strand, within Pf6N2E2_299 at 370.249 kb on - strand, within Pf6N2E2_299 at 370.395 kb on + strand, within Pf6N2E2_299 at 370.395 kb on + strand, within Pf6N2E2_299 at 370.395 kb on + strand, within Pf6N2E2_299 at 370.396 kb on - strand, within Pf6N2E2_299 at 370.396 kb on - strand, within Pf6N2E2_299 at 370.428 kb on + strand, within Pf6N2E2_299 at 370.429 kb on - strand, within Pf6N2E2_299 at 370.429 kb on - strand, within Pf6N2E2_299 at 370.552 kb on - strand, within Pf6N2E2_299 at 370.575 kb on + strand, within Pf6N2E2_299 at 370.575 kb on + strand, within Pf6N2E2_299 at 370.575 kb on + strand, within Pf6N2E2_299 at 370.593 kb on + strand, within Pf6N2E2_299 at 370.594 kb on - strand, within Pf6N2E2_299 at 370.626 kb on + strand at 370.627 kb on - strand at 370.826 kb on + strand, within Pf6N2E2_300 at 370.826 kb on + strand, within Pf6N2E2_300 at 370.826 kb on + strand, within Pf6N2E2_300 at 370.826 kb on + strand, within Pf6N2E2_300 at 370.846 kb on + strand, within Pf6N2E2_300 at 370.849 kb on + strand, within Pf6N2E2_300 at 370.849 kb on + strand, within Pf6N2E2_300 at 370.849 kb on + strand, within Pf6N2E2_300 at 371.099 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 0.00625 M remove 369,780 + Pf6N2E2_299 0.29 -1.4 369,780 + Pf6N2E2_299 0.29 +1.0 369,873 + Pf6N2E2_299 0.36 +0.2 369,873 + Pf6N2E2_299 0.36 -0.7 369,873 + Pf6N2E2_299 0.36 +0.3 369,873 + Pf6N2E2_299 0.36 -1.4 369,874 - Pf6N2E2_299 0.36 -0.8 369,874 - Pf6N2E2_299 0.36 +0.4 369,874 - Pf6N2E2_299 0.36 +0.2 369,874 - Pf6N2E2_299 0.36 -0.8 369,874 - Pf6N2E2_299 0.36 +0.0 369,874 - Pf6N2E2_299 0.36 +0.7 370,207 - Pf6N2E2_299 0.61 +0.0 370,248 + Pf6N2E2_299 0.64 -1.6 370,248 + Pf6N2E2_299 0.64 +0.1 370,249 - Pf6N2E2_299 0.64 +0.0 370,395 + Pf6N2E2_299 0.75 -0.2 370,395 + Pf6N2E2_299 0.75 +0.8 370,395 + Pf6N2E2_299 0.75 -0.6 370,396 - Pf6N2E2_299 0.75 +0.3 370,396 - Pf6N2E2_299 0.75 -1.2 370,428 + Pf6N2E2_299 0.77 -0.4 370,429 - Pf6N2E2_299 0.77 +1.6 370,429 - Pf6N2E2_299 0.77 +0.6 370,552 - Pf6N2E2_299 0.87 +0.5 370,575 + Pf6N2E2_299 0.88 +0.4 370,575 + Pf6N2E2_299 0.88 +0.2 370,575 + Pf6N2E2_299 0.88 +0.9 370,593 + Pf6N2E2_299 0.90 +0.3 370,594 - Pf6N2E2_299 0.90 +0.6 370,626 + +0.3 370,627 - -1.0 370,826 + Pf6N2E2_300 0.27 -0.0 370,826 + Pf6N2E2_300 0.27 -0.9 370,826 + Pf6N2E2_300 0.27 -0.8 370,826 + Pf6N2E2_300 0.27 +0.0 370,846 + Pf6N2E2_300 0.32 -1.1 370,849 + Pf6N2E2_300 0.33 -2.3 370,849 + Pf6N2E2_300 0.33 +0.8 370,849 + Pf6N2E2_300 0.33 -2.1 371,099 + -0.0
Or see this region's nucleotide sequence