Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2632

Experiment: perchlorate 0.00625 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	perchlorate 0.00625 M
3,093,073	-		Pf6N2E2_2630	0.43	+0.5
3,093,073	-		Pf6N2E2_2630	0.43	+0.7
3,093,201	+		Pf6N2E2_2630	0.59	-1.1
3,093,216	+		Pf6N2E2_2630	0.61	+1.1
3,093,216	+		Pf6N2E2_2630	0.61	-0.5
3,093,270	+		Pf6N2E2_2630	0.68	-1.1
3,093,270	+		Pf6N2E2_2630	0.68	+0.4
3,093,309	+		Pf6N2E2_2630	0.73	+0.2
3,093,309	+		Pf6N2E2_2630	0.73	+0.1
3,093,310	-		Pf6N2E2_2630	0.73	+2.9
3,093,310	-		Pf6N2E2_2630	0.73	-0.9
3,093,400	-		Pf6N2E2_2630	0.84	-0.1
3,093,534	-				-0.6
3,093,534	-				-0.3
3,093,534	-				-0.7
3,093,600	+				+1.2
3,093,600	+				-1.3
3,093,601	-				-1.2
3,093,601	-				+0.9
3,093,975	+				-0.3
3,093,975	+				-1.0
3,093,975	+				+0.0
3,093,976	-				-0.1
3,093,976	-				-0.9
3,093,976	-				+0.9
3,093,976	-				+0.0
3,093,976	-				+0.4
3,093,976	-				-0.4
3,094,172	+		Pf6N2E2_2632	0.16	+0.1
3,094,172	+		Pf6N2E2_2632	0.16	-0.3
3,094,172	+		Pf6N2E2_2632	0.16	+0.4
3,094,224	+		Pf6N2E2_2632	0.21	-1.0
3,094,225	-		Pf6N2E2_2632	0.21	-0.2
3,094,225	-		Pf6N2E2_2632	0.21	-0.9
3,094,419	-		Pf6N2E2_2632	0.37	-0.5
3,094,424	+		Pf6N2E2_2632	0.37	-0.8
3,094,424	+		Pf6N2E2_2632	0.37	-0.5
3,094,425	-		Pf6N2E2_2632	0.38	-1.0
3,094,425	-		Pf6N2E2_2632	0.38	-1.2
3,094,727	+		Pf6N2E2_2632	0.63	-0.6
3,095,025	-		Pf6N2E2_2632	0.88	-0.4
3,095,078	+				+0.4
3,095,078	+				-0.8
3,095,078	+				-0.7
3,095,079	-				-0.7
3,095,079	-				-0.1
3,095,079	-				-0.5
3,095,079	-				-1.4
3,095,079	-				-0.4
3,095,509	-		Pf6N2E2_2633	0.26	-0.3
3,095,553	+		Pf6N2E2_2633	0.34	-0.1
3,095,554	-		Pf6N2E2_2633	0.34	-0.2
3,095,554	-		Pf6N2E2_2633	0.34	-0.1
3,095,954	+				-0.9
3,095,954	+				-0.5
3,095,954	+				+0.2
3,095,955	-				+0.1
3,095,955	-				+1.7
3,095,955	-				-0.2
3,095,955	-				+0.5
3,095,959	+				-1.3
3,095,959	+				+0.4
3,095,959	+				-0.3
3,095,960	-				+0.1
3,095,960	-				+0.5
3,096,050	+				-2.2