Experiment: perchlorate 0.00625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2585 and Pf6N2E2_2586 are separated by 88 nucleotides Pf6N2E2_2586 and Pf6N2E2_2587 are separated by 31 nucleotides
Pf6N2E2_2585 - Flagellar hook-length control protein FliK, at 3,042,373 to 3,043,746
_2585
Pf6N2E2_2586 - Hpt domain protein, at 3,043,835 to 3,044,179
_2586
Pf6N2E2_2587 - Serine phosphatase RsbU, regulator of sigma subunit, at 3,044,211 to 3,045,917
_2587
Position (kb)
3043
3044
3045 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3042.864 kb on + strand, within Pf6N2E2_2585 at 3042.865 kb on - strand, within Pf6N2E2_2585 at 3042.865 kb on - strand, within Pf6N2E2_2585 at 3043.549 kb on - strand, within Pf6N2E2_2585 at 3043.650 kb on + strand at 3043.728 kb on + strand at 3043.728 kb on + strand at 3043.729 kb on - strand at 3043.729 kb on - strand at 3043.729 kb on - strand at 3043.774 kb on + strand at 3043.775 kb on - strand at 3043.775 kb on - strand at 3043.775 kb on - strand at 3043.775 kb on - strand at 3043.779 kb on - strand at 3043.779 kb on - strand at 3043.881 kb on + strand, within Pf6N2E2_2586 at 3043.882 kb on - strand, within Pf6N2E2_2586 at 3044.018 kb on - strand, within Pf6N2E2_2586 at 3044.388 kb on + strand, within Pf6N2E2_2587 at 3044.388 kb on + strand, within Pf6N2E2_2587 at 3044.388 kb on + strand, within Pf6N2E2_2587 at 3044.443 kb on + strand, within Pf6N2E2_2587 at 3044.443 kb on + strand, within Pf6N2E2_2587 at 3044.444 kb on - strand, within Pf6N2E2_2587 at 3044.444 kb on - strand, within Pf6N2E2_2587 at 3044.485 kb on + strand, within Pf6N2E2_2587 at 3044.485 kb on + strand, within Pf6N2E2_2587 at 3044.485 kb on + strand, within Pf6N2E2_2587 at 3044.486 kb on - strand, within Pf6N2E2_2587 at 3044.486 kb on - strand, within Pf6N2E2_2587 at 3044.489 kb on - strand, within Pf6N2E2_2587 at 3044.489 kb on - strand, within Pf6N2E2_2587 at 3044.563 kb on + strand, within Pf6N2E2_2587 at 3044.564 kb on - strand, within Pf6N2E2_2587 at 3044.564 kb on - strand, within Pf6N2E2_2587 at 3044.564 kb on - strand, within Pf6N2E2_2587 at 3044.584 kb on + strand, within Pf6N2E2_2587 at 3044.585 kb on - strand, within Pf6N2E2_2587 at 3044.585 kb on - strand, within Pf6N2E2_2587 at 3044.625 kb on + strand, within Pf6N2E2_2587 at 3044.626 kb on - strand, within Pf6N2E2_2587 at 3044.626 kb on - strand, within Pf6N2E2_2587 at 3044.626 kb on - strand, within Pf6N2E2_2587 at 3044.641 kb on + strand, within Pf6N2E2_2587 at 3044.641 kb on + strand, within Pf6N2E2_2587 at 3044.641 kb on + strand, within Pf6N2E2_2587 at 3044.641 kb on + strand, within Pf6N2E2_2587 at 3044.641 kb on + strand, within Pf6N2E2_2587 at 3044.642 kb on - strand, within Pf6N2E2_2587 at 3044.978 kb on + strand, within Pf6N2E2_2587 at 3044.978 kb on + strand, within Pf6N2E2_2587 at 3044.978 kb on + strand, within Pf6N2E2_2587 at 3044.978 kb on + strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3044.979 kb on - strand, within Pf6N2E2_2587 at 3045.053 kb on + strand, within Pf6N2E2_2587 at 3045.083 kb on - strand, within Pf6N2E2_2587 at 3045.141 kb on + strand, within Pf6N2E2_2587 at 3045.141 kb on + strand, within Pf6N2E2_2587 at 3045.141 kb on + strand, within Pf6N2E2_2587 at 3045.141 kb on + strand, within Pf6N2E2_2587 at 3045.142 kb on - strand, within Pf6N2E2_2587 at 3045.142 kb on - strand, within Pf6N2E2_2587 at 3045.142 kb on - strand, within Pf6N2E2_2587
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 0.00625 M remove 3,042,864 + Pf6N2E2_2585 0.36 +0.4 3,042,865 - Pf6N2E2_2585 0.36 -2.2 3,042,865 - Pf6N2E2_2585 0.36 -0.3 3,043,549 - Pf6N2E2_2585 0.86 -0.7 3,043,650 + -0.2 3,043,728 + +0.0 3,043,728 + +1.0 3,043,729 - +1.0 3,043,729 - -0.4 3,043,729 - +1.5 3,043,774 + -0.9 3,043,775 - -3.5 3,043,775 - -1.4 3,043,775 - +1.5 3,043,775 - -0.7 3,043,779 - -0.0 3,043,779 - -1.1 3,043,881 + Pf6N2E2_2586 0.13 -1.8 3,043,882 - Pf6N2E2_2586 0.14 -0.6 3,044,018 - Pf6N2E2_2586 0.53 -0.7 3,044,388 + Pf6N2E2_2587 0.10 +1.2 3,044,388 + Pf6N2E2_2587 0.10 -0.3 3,044,388 + Pf6N2E2_2587 0.10 -1.5 3,044,443 + Pf6N2E2_2587 0.14 +0.6 3,044,443 + Pf6N2E2_2587 0.14 +1.4 3,044,444 - Pf6N2E2_2587 0.14 +0.0 3,044,444 - Pf6N2E2_2587 0.14 +1.4 3,044,485 + Pf6N2E2_2587 0.16 +0.5 3,044,485 + Pf6N2E2_2587 0.16 -0.3 3,044,485 + Pf6N2E2_2587 0.16 -0.6 3,044,486 - Pf6N2E2_2587 0.16 +0.2 3,044,486 - Pf6N2E2_2587 0.16 +0.4 3,044,489 - Pf6N2E2_2587 0.16 +0.2 3,044,489 - Pf6N2E2_2587 0.16 -0.1 3,044,563 + Pf6N2E2_2587 0.21 +0.4 3,044,564 - Pf6N2E2_2587 0.21 +0.1 3,044,564 - Pf6N2E2_2587 0.21 +0.5 3,044,564 - Pf6N2E2_2587 0.21 -1.8 3,044,584 + Pf6N2E2_2587 0.22 +0.0 3,044,585 - Pf6N2E2_2587 0.22 +0.0 3,044,585 - Pf6N2E2_2587 0.22 +0.1 3,044,625 + Pf6N2E2_2587 0.24 -2.6 3,044,626 - Pf6N2E2_2587 0.24 +0.2 3,044,626 - Pf6N2E2_2587 0.24 +1.0 3,044,626 - Pf6N2E2_2587 0.24 -1.2 3,044,641 + Pf6N2E2_2587 0.25 -0.2 3,044,641 + Pf6N2E2_2587 0.25 -0.8 3,044,641 + Pf6N2E2_2587 0.25 +0.2 3,044,641 + Pf6N2E2_2587 0.25 +0.5 3,044,641 + Pf6N2E2_2587 0.25 -0.0 3,044,642 - Pf6N2E2_2587 0.25 -0.6 3,044,978 + Pf6N2E2_2587 0.45 +1.2 3,044,978 + Pf6N2E2_2587 0.45 -0.6 3,044,978 + Pf6N2E2_2587 0.45 +0.7 3,044,978 + Pf6N2E2_2587 0.45 -0.1 3,044,979 - Pf6N2E2_2587 0.45 +0.0 3,044,979 - Pf6N2E2_2587 0.45 +0.7 3,044,979 - Pf6N2E2_2587 0.45 +0.1 3,044,979 - Pf6N2E2_2587 0.45 -1.6 3,044,979 - Pf6N2E2_2587 0.45 +0.7 3,044,979 - Pf6N2E2_2587 0.45 -0.9 3,044,979 - Pf6N2E2_2587 0.45 +0.5 3,045,053 + Pf6N2E2_2587 0.49 -0.8 3,045,083 - Pf6N2E2_2587 0.51 -1.7 3,045,141 + Pf6N2E2_2587 0.54 +0.2 3,045,141 + Pf6N2E2_2587 0.54 +0.5 3,045,141 + Pf6N2E2_2587 0.54 -0.7 3,045,141 + Pf6N2E2_2587 0.54 +0.4 3,045,142 - Pf6N2E2_2587 0.55 +0.3 3,045,142 - Pf6N2E2_2587 0.55 -0.2 3,045,142 - Pf6N2E2_2587 0.55 -0.3
Or see this region's nucleotide sequence