Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1032
Experiment: perchlorate 0.00625 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | perchlorate 0.00625 M |
---|---|---|---|---|---|
remove | |||||
1,205,320 | + | -0.2 | |||
1,205,321 | - | +0.6 | |||
1,205,655 | - | Pf6N2E2_1031 | 0.40 | +0.1 | |
1,205,655 | - | Pf6N2E2_1031 | 0.40 | -1.8 | |
1,205,860 | + | Pf6N2E2_1031 | 0.62 | +1.7 | |
1,205,860 | + | Pf6N2E2_1031 | 0.62 | +0.4 | |
1,205,887 | - | Pf6N2E2_1031 | 0.64 | +0.3 | |
1,206,032 | + | Pf6N2E2_1031 | 0.80 | -0.4 | |
1,206,133 | + | +0.4 | |||
1,206,133 | + | -0.1 | |||
1,206,133 | + | -0.7 | |||
1,206,133 | + | +1.2 | |||
1,206,134 | - | -0.0 | |||
1,206,134 | - | +0.6 | |||
1,206,134 | - | -2.2 | |||
1,206,134 | - | -0.5 | |||
1,206,134 | - | +0.5 | |||
1,206,224 | - | -2.2 | |||
1,206,757 | - | Pf6N2E2_1032 | 0.66 | -0.9 | |
1,207,000 | + | -0.7 | |||
1,207,006 | + | +0.0 | |||
1,207,006 | + | +1.2 | |||
1,207,007 | - | -2.9 | |||
1,207,007 | - | +0.2 | |||
1,207,035 | - | +0.7 | |||
1,207,035 | - | +0.1 | |||
1,207,263 | + | Pf6N2E2_1033 | 0.20 | -0.1 | |
1,207,264 | - | Pf6N2E2_1033 | 0.20 | -0.2 | |
1,207,264 | - | Pf6N2E2_1033 | 0.20 | -0.0 | |
1,207,528 | - | Pf6N2E2_1033 | 0.45 | +0.0 | |
1,207,846 | - | Pf6N2E2_1033 | 0.76 | +0.2 | |
1,207,927 | + | Pf6N2E2_1033 | 0.84 | -0.4 |
Or see this region's nucleotide sequence