Experiment: DEANONOate 0.000625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3973 and Pf6N2E2_3974 are separated by 288 nucleotides Pf6N2E2_3974 and Pf6N2E2_3975 are separated by 12 nucleotides Pf6N2E2_3975 and Pf6N2E2_3976 are separated by 5 nucleotides
Pf6N2E2_3973 - hypothetical protein, at 4,622,751 to 4,623,119
_3973
Pf6N2E2_3974 - Taurine transport system permease protein TauC, at 4,623,408 to 4,624,274
_3974
Pf6N2E2_3975 - Taurine transport ATP-binding protein TauB, at 4,624,287 to 4,625,147
_3975
Pf6N2E2_3976 - Taurine-binding periplasmic protein TauA, at 4,625,153 to 4,626,178
_3976
Position (kb) 4623
4624
4625 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 4622.436 kb on + strand at 4622.436 kb on + strand at 4622.457 kb on + strand at 4622.498 kb on - strand at 4622.548 kb on + strand at 4622.564 kb on - strand at 4622.564 kb on - strand at 4622.564 kb on - strand at 4622.580 kb on + strand at 4622.580 kb on + strand at 4622.580 kb on + strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.581 kb on - strand at 4622.605 kb on - strand at 4622.605 kb on - strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.685 kb on + strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.686 kb on - strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.698 kb on + strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.699 kb on - strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.700 kb on + strand at 4622.718 kb on + strand at 4622.718 kb on + strand at 4622.737 kb on + strand at 4622.737 kb on + strand at 4622.737 kb on + strand at 4622.738 kb on - strand at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.850 kb on + strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.851 kb on - strand, within Pf6N2E2_3973 at 4622.853 kb on + strand, within Pf6N2E2_3973 at 4622.854 kb on - strand, within Pf6N2E2_3973 at 4622.889 kb on - strand, within Pf6N2E2_3973 at 4623.192 kb on + strand at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.553 kb on + strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.554 kb on - strand, within Pf6N2E2_3974 at 4623.715 kb on + strand, within Pf6N2E2_3974 at 4623.715 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.766 kb on + strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4623.767 kb on - strand, within Pf6N2E2_3974 at 4624.048 kb on + strand, within Pf6N2E2_3974 at 4624.048 kb on + strand, within Pf6N2E2_3974 at 4624.049 kb on - strand, within Pf6N2E2_3974 at 4624.244 kb on - strand at 4624.244 kb on - strand at 4624.254 kb on + strand at 4624.255 kb on - strand at 4624.255 kb on - strand at 4624.255 kb on - strand at 4624.255 kb on - strand at 4624.263 kb on + strand at 4624.264 kb on - strand at 4624.291 kb on + strand at 4624.292 kb on - strand at 4624.421 kb on - strand, within Pf6N2E2_3975 at 4624.699 kb on + strand, within Pf6N2E2_3975 at 4624.700 kb on - strand, within Pf6N2E2_3975 at 4624.738 kb on + strand, within Pf6N2E2_3975 at 4624.738 kb on + strand, within Pf6N2E2_3975 at 4624.738 kb on + strand, within Pf6N2E2_3975 at 4624.739 kb on - strand, within Pf6N2E2_3975 at 4624.739 kb on - strand, within Pf6N2E2_3975 at 4625.103 kb on - strand at 4625.190 kb on + strand at 4625.190 kb on + strand at 4625.190 kb on + strand at 4625.190 kb on + strand at 4625.190 kb on + strand at 4625.191 kb on - strand at 4625.191 kb on - strand at 4625.191 kb on - strand at 4625.256 kb on + strand, within Pf6N2E2_3976
Per-strain Table
Position Strand Gene LocusTag Fraction DEANONOate 0.000625 M remove 4,622,436 + -1.3 4,622,436 + -0.4 4,622,457 + -1.4 4,622,498 - -1.9 4,622,548 + -0.4 4,622,564 - -1.3 4,622,564 - -1.5 4,622,564 - -0.2 4,622,580 + -0.0 4,622,580 + -1.5 4,622,580 + +1.9 4,622,581 - -1.1 4,622,581 - +1.0 4,622,581 - +2.5 4,622,581 - -1.3 4,622,581 - +0.0 4,622,581 - +0.6 4,622,581 - -0.2 4,622,605 - -2.4 4,622,605 - +0.4 4,622,685 + +3.1 4,622,685 + -0.4 4,622,685 + +3.0 4,622,685 + +5.1 4,622,685 + +2.8 4,622,685 + -1.4 4,622,685 + +2.1 4,622,685 + +2.1 4,622,685 + +1.3 4,622,686 - +0.8 4,622,686 - -0.8 4,622,686 - +1.6 4,622,686 - -0.6 4,622,698 + +4.8 4,622,698 + +3.3 4,622,698 + +3.6 4,622,698 + +2.6 4,622,698 + -0.9 4,622,698 + +3.0 4,622,698 + +5.1 4,622,699 - -0.9 4,622,699 - +1.3 4,622,699 - +0.8 4,622,699 - -1.0 4,622,700 + +5.4 4,622,700 + +4.0 4,622,700 + +3.6 4,622,700 + +4.6 4,622,718 + +1.1 4,622,718 + +4.1 4,622,737 + +5.9 4,622,737 + +3.2 4,622,737 + +1.3 4,622,738 - -0.3 4,622,850 + Pf6N2E2_3973 0.27 +0.8 4,622,850 + Pf6N2E2_3973 0.27 +1.6 4,622,850 + Pf6N2E2_3973 0.27 +1.4 4,622,851 - Pf6N2E2_3973 0.27 -1.5 4,622,851 - Pf6N2E2_3973 0.27 -0.8 4,622,851 - Pf6N2E2_3973 0.27 -3.1 4,622,853 + Pf6N2E2_3973 0.28 +0.8 4,622,854 - Pf6N2E2_3973 0.28 +0.6 4,622,889 - Pf6N2E2_3973 0.37 +0.9 4,623,192 + -2.5 4,623,553 + Pf6N2E2_3974 0.17 -0.3 4,623,553 + Pf6N2E2_3974 0.17 -0.4 4,623,553 + Pf6N2E2_3974 0.17 +0.9 4,623,553 + Pf6N2E2_3974 0.17 +0.4 4,623,553 + Pf6N2E2_3974 0.17 -0.7 4,623,553 + Pf6N2E2_3974 0.17 +0.4 4,623,553 + Pf6N2E2_3974 0.17 +0.7 4,623,553 + Pf6N2E2_3974 0.17 -0.2 4,623,553 + Pf6N2E2_3974 0.17 +0.5 4,623,554 - Pf6N2E2_3974 0.17 -0.7 4,623,554 - Pf6N2E2_3974 0.17 +0.3 4,623,554 - Pf6N2E2_3974 0.17 -1.4 4,623,554 - Pf6N2E2_3974 0.17 -0.2 4,623,554 - Pf6N2E2_3974 0.17 +1.6 4,623,554 - Pf6N2E2_3974 0.17 +0.9 4,623,715 + Pf6N2E2_3974 0.35 -1.8 4,623,715 + Pf6N2E2_3974 0.35 +0.0 4,623,766 + Pf6N2E2_3974 0.41 +2.6 4,623,766 + Pf6N2E2_3974 0.41 +0.2 4,623,766 + Pf6N2E2_3974 0.41 -0.0 4,623,766 + Pf6N2E2_3974 0.41 -2.7 4,623,766 + Pf6N2E2_3974 0.41 +2.2 4,623,766 + Pf6N2E2_3974 0.41 -2.1 4,623,766 + Pf6N2E2_3974 0.41 -1.5 4,623,766 + Pf6N2E2_3974 0.41 -0.8 4,623,766 + Pf6N2E2_3974 0.41 -0.7 4,623,766 + Pf6N2E2_3974 0.41 +0.8 4,623,767 - Pf6N2E2_3974 0.41 -1.4 4,623,767 - Pf6N2E2_3974 0.41 -0.4 4,623,767 - Pf6N2E2_3974 0.41 -1.4 4,623,767 - Pf6N2E2_3974 0.41 -1.1 4,623,767 - Pf6N2E2_3974 0.41 -0.4 4,623,767 - Pf6N2E2_3974 0.41 -2.1 4,623,767 - Pf6N2E2_3974 0.41 +1.0 4,623,767 - Pf6N2E2_3974 0.41 -0.4 4,623,767 - Pf6N2E2_3974 0.41 -0.3 4,624,048 + Pf6N2E2_3974 0.74 -0.1 4,624,048 + Pf6N2E2_3974 0.74 +0.2 4,624,049 - Pf6N2E2_3974 0.74 -2.2 4,624,244 - +0.2 4,624,244 - +0.7 4,624,254 + +0.3 4,624,255 - +0.9 4,624,255 - +0.6 4,624,255 - +0.1 4,624,255 - -1.6 4,624,263 + +1.1 4,624,264 - +0.8 4,624,291 + -0.4 4,624,292 - +1.8 4,624,421 - Pf6N2E2_3975 0.16 -3.2 4,624,699 + Pf6N2E2_3975 0.48 -1.1 4,624,700 - Pf6N2E2_3975 0.48 -1.7 4,624,738 + Pf6N2E2_3975 0.52 +1.1 4,624,738 + Pf6N2E2_3975 0.52 +0.4 4,624,738 + Pf6N2E2_3975 0.52 +0.5 4,624,739 - Pf6N2E2_3975 0.52 +0.7 4,624,739 - Pf6N2E2_3975 0.52 +0.3 4,625,103 - -3.3 4,625,190 + +0.0 4,625,190 + +0.1 4,625,190 + +0.3 4,625,190 + -1.3 4,625,190 + +0.6 4,625,191 - -1.2 4,625,191 - -0.5 4,625,191 - -1.7 4,625,256 + Pf6N2E2_3976 0.10 -0.4
Or see this region's nucleotide sequence