Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3387

Experiment: DEANONOate 0.000625 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DEANONOate 0.000625 M
3,918,105	+				-3.7
3,918,105	+				+1.7
3,918,105	+				-0.1
3,918,106	-				-2.7
3,918,106	-				+0.1
3,918,106	-				-0.2
3,918,106	-				+1.2
3,918,111	+				-0.7
3,918,111	+				-0.6
3,918,112	-				-0.3
3,918,112	-				-0.9
3,918,172	+		Pf6N2E2_3386	0.29	+2.0
3,918,173	-		Pf6N2E2_3386	0.29	+1.4
3,918,173	-		Pf6N2E2_3386	0.29	+0.2
3,918,173	-		Pf6N2E2_3386	0.29	+1.2
3,918,210	-		Pf6N2E2_3386	0.42	-0.5
3,918,210	-		Pf6N2E2_3386	0.42	+0.6
3,918,210	-		Pf6N2E2_3386	0.42	+0.7
3,918,232	+		Pf6N2E2_3386	0.50	-0.9
3,918,233	-		Pf6N2E2_3386	0.51	+2.3
3,918,358	+				-0.3
3,918,358	+				-0.7
3,918,358	+				+0.4
3,918,359	-				-2.9
3,918,871	-				+0.0
3,918,997	+				+0.9
3,919,050	+				+1.0
3,919,050	+				-1.8
3,919,051	-				-1.0
3,919,105	-				-2.3
3,919,105	-				-3.6
3,919,105	-				+2.0
3,919,105	-				+1.2
3,919,119	+				-1.6
3,919,328	+		Pf6N2E2_3387	0.23	-1.9
3,919,328	+		Pf6N2E2_3387	0.23	-1.4
3,919,328	+		Pf6N2E2_3387	0.23	-0.4
3,919,329	-		Pf6N2E2_3387	0.23	-0.8
3,919,329	-		Pf6N2E2_3387	0.23	-1.1
3,919,329	-		Pf6N2E2_3387	0.23	+1.0
3,919,594	+		Pf6N2E2_3387	0.44	-0.3
3,919,595	-		Pf6N2E2_3387	0.44	-0.3
3,919,595	-		Pf6N2E2_3387	0.44	+1.0
3,919,595	-		Pf6N2E2_3387	0.44	-1.1
3,919,595	-		Pf6N2E2_3387	0.44	+1.4
3,919,595	-		Pf6N2E2_3387	0.44	-2.3
3,919,616	+		Pf6N2E2_3387	0.45	+0.5
3,919,617	-		Pf6N2E2_3387	0.46	-0.3
3,919,686	-		Pf6N2E2_3387	0.51	-1.3
3,919,803	+		Pf6N2E2_3387	0.60	+0.5
3,919,803	+		Pf6N2E2_3387	0.60	-2.6
3,919,896	+		Pf6N2E2_3387	0.68	-0.0
3,919,897	-		Pf6N2E2_3387	0.68	-0.4
3,919,954	+		Pf6N2E2_3387	0.72	-0.4
3,919,954	+		Pf6N2E2_3387	0.72	+0.8
3,919,954	+		Pf6N2E2_3387	0.72	+1.3
3,919,954	+		Pf6N2E2_3387	0.72	-1.2
3,919,954	+		Pf6N2E2_3387	0.72	+1.9
3,919,955	-		Pf6N2E2_3387	0.72	-3.9
3,919,955	-		Pf6N2E2_3387	0.72	-2.0
3,919,955	-		Pf6N2E2_3387	0.72	-1.7
3,919,971	+		Pf6N2E2_3387	0.74	+0.8
3,919,971	+		Pf6N2E2_3387	0.74	-0.7
3,919,971	+		Pf6N2E2_3387	0.74	-2.5
3,919,996	-		Pf6N2E2_3387	0.76	-1.6
3,920,045	+		Pf6N2E2_3387	0.80	-0.1
3,920,045	+		Pf6N2E2_3387	0.80	-2.2
3,920,046	-		Pf6N2E2_3387	0.80	-0.1
3,920,046	-		Pf6N2E2_3387	0.80	-3.6
3,920,046	-		Pf6N2E2_3387	0.80	-1.7
3,920,046	-		Pf6N2E2_3387	0.80	-0.4
3,920,161	+		Pf6N2E2_3387	0.89	+0.5
3,920,162	-		Pf6N2E2_3387	0.89	-0.6
3,920,176	+				+0.8
3,920,176	+				+0.3
3,920,177	-				+0.1
3,920,177	-				+1.3
3,920,177	-				+0.8
3,920,177	-				+1.5
3,920,177	-				+1.9
3,920,220	+				+0.4
3,920,220	+				+0.1
3,920,374	-				-3.5
3,920,384	+				+1.0
3,920,416	+				+0.2
3,920,417	-				-0.5
3,920,457	+				+2.6
3,920,466	+				-1.2
3,920,516	+				+0.4
3,920,523	+				-2.4
3,920,523	+				+0.4
3,920,523	+				-1.8
3,920,523	+				-2.4
3,920,524	-				-3.3
3,920,524	-				+1.0
3,920,524	-				-3.2
3,920,526	+				+2.3
3,920,526	+				+0.6
3,920,526	+				-0.7
3,920,526	+				-2.4
3,920,526	+				+0.4
3,920,526	+				+1.6
3,920,527	-				-1.6
3,920,527	-				-1.7
3,920,527	-				+1.2
3,920,527	-				-0.6
3,920,527	-				+0.9
3,920,527	-				+0.6
3,920,527	-				-3.8
3,920,529	+				-0.7
3,920,529	+				+0.1
3,920,529	+				+1.1
3,920,529	+				-0.6
3,920,530	-				+0.2
3,920,536	+				+0.5
3,920,536	+				+1.4
3,920,537	-				-1.3
3,920,537	-				-1.5
3,920,559	+				+1.6
3,920,560	-				+0.7
3,920,560	-				+0.5
3,920,560	-				+0.6
3,920,659	+				-1.0
3,920,660	-				-0.8
3,920,660	-				+0.3
3,920,753	+				+0.0
3,920,753	+				-3.0
3,920,753	+				+1.6
3,920,754	-				+1.4
3,920,754	-				+1.9
3,920,778	+				+1.3
3,920,778	+				+0.7
3,920,779	-				+1.4
3,920,779	-				+0.8
3,920,889	-		Pf6N2E2_3388	0.16	+2.3
3,920,903	+		Pf6N2E2_3388	0.17	-3.1
3,920,903	+		Pf6N2E2_3388	0.17	-1.0
3,920,904	-		Pf6N2E2_3388	0.17	+0.4
3,920,904	-		Pf6N2E2_3388	0.17	+0.6
3,920,980	+		Pf6N2E2_3388	0.25	-0.1
3,920,980	+		Pf6N2E2_3388	0.25	+1.4
3,920,981	-		Pf6N2E2_3388	0.25	-2.0
3,920,993	+		Pf6N2E2_3388	0.26	-0.5
3,920,994	-		Pf6N2E2_3388	0.26	+1.4
3,921,084	+		Pf6N2E2_3388	0.35	+0.4
3,921,084	+		Pf6N2E2_3388	0.35	-0.0