Experiment: DEANONOate 0.000625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_815 and Pf6N2E2_816 overlap by 1 nucleotides Pf6N2E2_816 and Pf6N2E2_817 overlap by 4 nucleotides Pf6N2E2_817 and Pf6N2E2_818 are separated by 5 nucleotides
Pf6N2E2_815 - Signal transduction histidine kinase, at 946,888 to 950,370
_815
Pf6N2E2_816 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 950,370 to 951,185
_816
Pf6N2E2_817 - Protein-glutamate methylesterase (EC 3.1.1.61), at 951,182 to 951,769
_817
Pf6N2E2_818 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 951,775 to 953,055
_818
Position (kb)
950
951
952 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 949.793 kb on - strand, within Pf6N2E2_815 at 949.840 kb on + strand, within Pf6N2E2_815 at 949.841 kb on - strand, within Pf6N2E2_815 at 949.841 kb on - strand, within Pf6N2E2_815 at 950.150 kb on + strand at 950.150 kb on + strand at 950.150 kb on + strand at 950.150 kb on + strand at 950.150 kb on + strand at 950.151 kb on - strand at 950.151 kb on - strand at 950.151 kb on - strand at 950.151 kb on - strand at 950.151 kb on - strand at 950.227 kb on - strand at 950.427 kb on + strand at 950.427 kb on + strand at 950.428 kb on - strand at 950.428 kb on - strand at 950.433 kb on + strand at 950.658 kb on + strand, within Pf6N2E2_816 at 950.659 kb on - strand, within Pf6N2E2_816 at 950.709 kb on + strand at 950.710 kb on - strand, within Pf6N2E2_816 at 950.764 kb on - strand, within Pf6N2E2_816 at 950.835 kb on - strand, within Pf6N2E2_816 at 950.835 kb on - strand, within Pf6N2E2_816 at 950.835 kb on - strand, within Pf6N2E2_816 at 950.835 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.839 kb on - strand, within Pf6N2E2_816 at 950.887 kb on - strand, within Pf6N2E2_816 at 950.887 kb on - strand, within Pf6N2E2_816 at 950.887 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 950.890 kb on - strand, within Pf6N2E2_816 at 951.019 kb on + strand at 951.022 kb on - strand, within Pf6N2E2_816 at 951.022 kb on - strand, within Pf6N2E2_816 at 951.022 kb on - strand, within Pf6N2E2_816 at 951.022 kb on - strand, within Pf6N2E2_816 at 951.315 kb on + strand, within Pf6N2E2_817 at 951.316 kb on - strand, within Pf6N2E2_817 at 951.426 kb on + strand, within Pf6N2E2_817 at 951.426 kb on + strand, within Pf6N2E2_817 at 951.426 kb on + strand, within Pf6N2E2_817 at 951.426 kb on + strand, within Pf6N2E2_817 at 951.426 kb on + strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.427 kb on - strand, within Pf6N2E2_817 at 951.428 kb on + strand, within Pf6N2E2_817 at 951.428 kb on + strand, within Pf6N2E2_817 at 951.428 kb on + strand, within Pf6N2E2_817 at 951.428 kb on + strand, within Pf6N2E2_817 at 951.428 kb on + strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.429 kb on - strand, within Pf6N2E2_817 at 951.721 kb on + strand at 951.727 kb on + strand at 951.727 kb on + strand at 951.727 kb on + strand at 951.728 kb on - strand at 951.786 kb on + strand at 951.786 kb on + strand at 951.787 kb on - strand at 951.787 kb on - strand at 951.787 kb on - strand at 952.021 kb on - strand, within Pf6N2E2_818 at 952.057 kb on + strand, within Pf6N2E2_818 at 952.057 kb on + strand, within Pf6N2E2_818 at 952.057 kb on + strand, within Pf6N2E2_818 at 952.057 kb on + strand, within Pf6N2E2_818 at 952.058 kb on - strand, within Pf6N2E2_818 at 952.058 kb on - strand, within Pf6N2E2_818 at 952.058 kb on - strand, within Pf6N2E2_818 at 952.156 kb on + strand, within Pf6N2E2_818 at 952.157 kb on - strand, within Pf6N2E2_818 at 952.157 kb on - strand, within Pf6N2E2_818 at 952.157 kb on - strand, within Pf6N2E2_818
Per-strain Table
Position Strand Gene LocusTag Fraction DEANONOate 0.000625 M remove 949,793 - Pf6N2E2_815 0.83 -2.2 949,840 + Pf6N2E2_815 0.85 +4.4 949,841 - Pf6N2E2_815 0.85 +0.8 949,841 - Pf6N2E2_815 0.85 +0.8 950,150 + +2.5 950,150 + +2.4 950,150 + +2.4 950,150 + +1.9 950,150 + +1.9 950,151 - -2.3 950,151 - -0.2 950,151 - -1.8 950,151 - -1.9 950,151 - -2.3 950,227 - -3.6 950,427 + +3.9 950,427 + +4.1 950,428 - +1.7 950,428 - -2.6 950,433 + +4.5 950,658 + Pf6N2E2_816 0.35 +0.3 950,659 - Pf6N2E2_816 0.35 -1.7 950,709 + +3.3 950,710 - Pf6N2E2_816 0.42 -0.0 950,764 - Pf6N2E2_816 0.48 -2.7 950,835 - Pf6N2E2_816 0.57 -2.4 950,835 - Pf6N2E2_816 0.57 +0.5 950,835 - Pf6N2E2_816 0.57 -2.5 950,835 - Pf6N2E2_816 0.57 -0.3 950,839 - Pf6N2E2_816 0.57 -0.6 950,839 - Pf6N2E2_816 0.57 +0.4 950,839 - Pf6N2E2_816 0.57 -2.6 950,839 - Pf6N2E2_816 0.57 -2.8 950,839 - Pf6N2E2_816 0.57 -1.6 950,839 - Pf6N2E2_816 0.57 -1.8 950,887 - Pf6N2E2_816 0.63 -1.3 950,887 - Pf6N2E2_816 0.63 -3.0 950,887 - Pf6N2E2_816 0.63 -1.9 950,890 - Pf6N2E2_816 0.64 -2.4 950,890 - Pf6N2E2_816 0.64 -3.5 950,890 - Pf6N2E2_816 0.64 -2.0 950,890 - Pf6N2E2_816 0.64 -0.3 950,890 - Pf6N2E2_816 0.64 -0.4 950,890 - Pf6N2E2_816 0.64 -3.6 950,890 - Pf6N2E2_816 0.64 +0.9 950,890 - Pf6N2E2_816 0.64 -0.8 951,019 + +0.1 951,022 - Pf6N2E2_816 0.80 -3.4 951,022 - Pf6N2E2_816 0.80 +0.2 951,022 - Pf6N2E2_816 0.80 -1.1 951,022 - Pf6N2E2_816 0.80 -2.8 951,315 + Pf6N2E2_817 0.23 +4.3 951,316 - Pf6N2E2_817 0.23 -3.1 951,426 + Pf6N2E2_817 0.41 +3.7 951,426 + Pf6N2E2_817 0.41 +3.0 951,426 + Pf6N2E2_817 0.41 +2.7 951,426 + Pf6N2E2_817 0.41 +3.2 951,426 + Pf6N2E2_817 0.41 +3.5 951,427 - Pf6N2E2_817 0.42 -3.3 951,427 - Pf6N2E2_817 0.42 -1.7 951,427 - Pf6N2E2_817 0.42 -3.0 951,427 - Pf6N2E2_817 0.42 -0.8 951,427 - Pf6N2E2_817 0.42 -3.4 951,427 - Pf6N2E2_817 0.42 -2.7 951,427 - Pf6N2E2_817 0.42 -2.5 951,428 + Pf6N2E2_817 0.42 +3.5 951,428 + Pf6N2E2_817 0.42 +5.4 951,428 + Pf6N2E2_817 0.42 +1.1 951,428 + Pf6N2E2_817 0.42 +2.8 951,428 + Pf6N2E2_817 0.42 +4.0 951,429 - Pf6N2E2_817 0.42 -1.5 951,429 - Pf6N2E2_817 0.42 -0.5 951,429 - Pf6N2E2_817 0.42 -0.3 951,429 - Pf6N2E2_817 0.42 -2.7 951,429 - Pf6N2E2_817 0.42 -3.0 951,429 - Pf6N2E2_817 0.42 -0.7 951,429 - Pf6N2E2_817 0.42 -3.1 951,721 + +6.2 951,727 + +2.9 951,727 + +2.1 951,727 + +0.6 951,728 - +0.1 951,786 + -2.2 951,786 + -2.3 951,787 - -4.0 951,787 - -1.3 951,787 - -2.1 952,021 - Pf6N2E2_818 0.19 -3.3 952,057 + Pf6N2E2_818 0.22 -0.9 952,057 + Pf6N2E2_818 0.22 -2.3 952,057 + Pf6N2E2_818 0.22 -3.6 952,057 + Pf6N2E2_818 0.22 -2.3 952,058 - Pf6N2E2_818 0.22 +0.4 952,058 - Pf6N2E2_818 0.22 -2.3 952,058 - Pf6N2E2_818 0.22 -4.1 952,156 + Pf6N2E2_818 0.30 -2.2 952,157 - Pf6N2E2_818 0.30 -2.5 952,157 - Pf6N2E2_818 0.30 -1.8 952,157 - Pf6N2E2_818 0.30 -1.1
Or see this region's nucleotide sequence