Experiment: DEANONOate 0.000625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3396 and Pf6N2E2_3397 are separated by 365 nucleotides
Pf6N2E2_3396 - hypothetical protein, at 3,937,550 to 3,937,669
_3396
Pf6N2E2_3397 - Phage protein, at 3,938,035 to 3,939,618
_3397
Position (kb)
3938
3939
3940 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3937.080 kb on - strand at 3937.080 kb on - strand at 3937.080 kb on - strand at 3937.100 kb on + strand at 3937.100 kb on + strand at 3937.100 kb on + strand at 3937.100 kb on + strand at 3937.101 kb on - strand at 3937.101 kb on - strand at 3937.101 kb on - strand at 3937.101 kb on - strand at 3937.101 kb on - strand at 3937.172 kb on + strand at 3937.173 kb on - strand at 3937.293 kb on + strand at 3937.293 kb on + strand at 3937.294 kb on - strand at 3937.324 kb on + strand at 3937.371 kb on + strand at 3937.371 kb on + strand at 3937.372 kb on - strand at 3937.372 kb on - strand at 3937.372 kb on - strand at 3937.372 kb on - strand at 3937.511 kb on + strand at 3937.511 kb on + strand at 3937.512 kb on - strand at 3937.512 kb on - strand at 3937.521 kb on - strand at 3937.521 kb on - strand at 3937.534 kb on + strand at 3937.534 kb on + strand at 3937.552 kb on - strand at 3937.552 kb on - strand at 3937.612 kb on + strand, within Pf6N2E2_3396 at 3937.612 kb on + strand, within Pf6N2E2_3396 at 3937.615 kb on + strand, within Pf6N2E2_3396 at 3937.615 kb on + strand, within Pf6N2E2_3396 at 3937.644 kb on + strand, within Pf6N2E2_3396 at 3937.644 kb on + strand, within Pf6N2E2_3396 at 3937.644 kb on + strand, within Pf6N2E2_3396 at 3937.645 kb on - strand, within Pf6N2E2_3396 at 3937.645 kb on - strand, within Pf6N2E2_3396 at 3937.645 kb on - strand, within Pf6N2E2_3396 at 3937.645 kb on - strand, within Pf6N2E2_3396 at 3937.645 kb on - strand, within Pf6N2E2_3396 at 3937.711 kb on + strand at 3937.711 kb on + strand at 3937.712 kb on - strand at 3937.712 kb on - strand at 3937.712 kb on - strand at 3937.713 kb on + strand at 3937.714 kb on - strand at 3937.725 kb on + strand at 3937.725 kb on + strand at 3937.725 kb on + strand at 3937.726 kb on - strand at 3937.726 kb on - strand at 3937.726 kb on - strand at 3937.726 kb on - strand at 3937.789 kb on - strand at 3937.789 kb on - strand at 3937.866 kb on - strand at 3937.866 kb on - strand at 3937.882 kb on + strand at 3937.900 kb on + strand at 3937.900 kb on + strand at 3937.900 kb on + strand at 3937.900 kb on + strand at 3937.900 kb on + strand at 3937.901 kb on - strand at 3937.901 kb on - strand at 3937.937 kb on + strand at 3938.046 kb on + strand at 3938.046 kb on + strand at 3938.047 kb on - strand at 3938.047 kb on - strand at 3938.055 kb on - strand at 3938.130 kb on + strand at 3938.131 kb on - strand at 3938.131 kb on - strand at 3938.132 kb on + strand at 3938.133 kb on - strand at 3938.483 kb on + strand, within Pf6N2E2_3397 at 3938.525 kb on + strand, within Pf6N2E2_3397 at 3938.907 kb on - strand, within Pf6N2E2_3397 at 3939.173 kb on - strand, within Pf6N2E2_3397 at 3939.288 kb on + strand, within Pf6N2E2_3397 at 3939.500 kb on + strand at 3939.501 kb on - strand at 3939.541 kb on + strand at 3939.550 kb on + strand at 3939.597 kb on + strand at 3939.688 kb on - strand at 3939.689 kb on + strand at 3939.690 kb on - strand at 3939.711 kb on + strand at 3939.725 kb on + strand at 3940.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction DEANONOate 0.000625 M remove 3,937,080 - +0.5 3,937,080 - +1.0 3,937,080 - -0.0 3,937,100 + +0.1 3,937,100 + -0.9 3,937,100 + +1.2 3,937,100 + -1.4 3,937,101 - +0.2 3,937,101 - -1.2 3,937,101 - +1.7 3,937,101 - +1.2 3,937,101 - -3.8 3,937,172 + -0.9 3,937,173 - +0.4 3,937,293 + +1.0 3,937,293 + +1.0 3,937,294 - +1.9 3,937,324 + +1.4 3,937,371 + +0.1 3,937,371 + +2.0 3,937,372 - +1.3 3,937,372 - -2.0 3,937,372 - +0.3 3,937,372 - -0.1 3,937,511 + +1.6 3,937,511 + +1.7 3,937,512 - -0.9 3,937,512 - +0.2 3,937,521 - +1.2 3,937,521 - +1.9 3,937,534 + +0.2 3,937,534 + +1.0 3,937,552 - -2.5 3,937,552 - -0.1 3,937,612 + Pf6N2E2_3396 0.52 +0.4 3,937,612 + Pf6N2E2_3396 0.52 -0.3 3,937,615 + Pf6N2E2_3396 0.54 +0.8 3,937,615 + Pf6N2E2_3396 0.54 -2.9 3,937,644 + Pf6N2E2_3396 0.78 -0.0 3,937,644 + Pf6N2E2_3396 0.78 -2.4 3,937,644 + Pf6N2E2_3396 0.78 -2.4 3,937,645 - Pf6N2E2_3396 0.79 +0.4 3,937,645 - Pf6N2E2_3396 0.79 -2.7 3,937,645 - Pf6N2E2_3396 0.79 -0.7 3,937,645 - Pf6N2E2_3396 0.79 -3.4 3,937,645 - Pf6N2E2_3396 0.79 +2.5 3,937,711 + -2.2 3,937,711 + -2.9 3,937,712 - -0.1 3,937,712 - +1.1 3,937,712 - +0.2 3,937,713 + -0.7 3,937,714 - +1.4 3,937,725 + -1.9 3,937,725 + +1.6 3,937,725 + -0.5 3,937,726 - -0.1 3,937,726 - +0.3 3,937,726 - -0.9 3,937,726 - -0.8 3,937,789 - -2.8 3,937,789 - +0.2 3,937,866 - +1.0 3,937,866 - -0.5 3,937,882 + +0.8 3,937,900 + +0.6 3,937,900 + +0.4 3,937,900 + +0.7 3,937,900 + -2.8 3,937,900 + -1.8 3,937,901 - -2.5 3,937,901 - -3.1 3,937,937 + -0.5 3,938,046 + +0.4 3,938,046 + +0.6 3,938,047 - +1.0 3,938,047 - -0.8 3,938,055 - +1.1 3,938,130 + +1.0 3,938,131 - -1.1 3,938,131 - -0.5 3,938,132 + +0.3 3,938,133 - +0.1 3,938,483 + Pf6N2E2_3397 0.28 -0.1 3,938,525 + Pf6N2E2_3397 0.31 -2.6 3,938,907 - Pf6N2E2_3397 0.55 -2.9 3,939,173 - Pf6N2E2_3397 0.72 -2.5 3,939,288 + Pf6N2E2_3397 0.79 -3.6 3,939,500 + -2.7 3,939,501 - -1.4 3,939,541 + -2.9 3,939,550 + +0.1 3,939,597 + -0.6 3,939,688 - -1.8 3,939,689 + -3.5 3,939,690 - +0.5 3,939,711 + -2.1 3,939,725 + -0.4 3,940,454 + -0.5
Or see this region's nucleotide sequence