Experiment: DEANONOate 0.000625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3284 and Pf6N2E2_3285 are separated by 183 nucleotides Pf6N2E2_3285 and Pf6N2E2_3286 overlap by 4 nucleotides Pf6N2E2_3286 and Pf6N2E2_3287 are separated by 172 nucleotides
Pf6N2E2_3284 - Septum formation protein Maf, at 3,791,060 to 3,791,656
_3284
Pf6N2E2_3285 - Rod shape-determining protein MreD, at 3,791,840 to 3,792,328
_3285
Pf6N2E2_3286 - Rod shape-determining protein MreC, at 3,792,325 to 3,793,446
_3286
Pf6N2E2_3287 - Rod shape-determining protein MreB, at 3,793,619 to 3,794,656
_3287
Position (kb)
3792
3793
3794 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3791.342 kb on + strand, within Pf6N2E2_3284 at 3791.343 kb on - strand, within Pf6N2E2_3284 at 3791.343 kb on - strand, within Pf6N2E2_3284 at 3791.343 kb on - strand, within Pf6N2E2_3284 at 3791.343 kb on - strand, within Pf6N2E2_3284 at 3791.343 kb on - strand, within Pf6N2E2_3284 at 3791.527 kb on - strand, within Pf6N2E2_3284 at 3791.644 kb on - strand at 3791.644 kb on - strand at 3791.644 kb on - strand at 3791.755 kb on - strand at 3791.804 kb on + strand at 3791.804 kb on + strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.805 kb on - strand at 3791.823 kb on + strand at 3791.824 kb on - strand at 3791.824 kb on - strand at 3791.828 kb on - strand at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.032 kb on - strand, within Pf6N2E2_3285 at 3792.671 kb on - strand, within Pf6N2E2_3286 at 3793.514 kb on - strand at 3793.552 kb on - strand at 3793.552 kb on - strand at 3793.552 kb on - strand at 3793.601 kb on - strand at 3793.601 kb on - strand at 3793.601 kb on - strand at 3793.601 kb on - strand at 3793.621 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DEANONOate 0.000625 M remove 3,791,342 + Pf6N2E2_3284 0.47 +0.0 3,791,343 - Pf6N2E2_3284 0.47 -0.1 3,791,343 - Pf6N2E2_3284 0.47 -1.1 3,791,343 - Pf6N2E2_3284 0.47 -1.1 3,791,343 - Pf6N2E2_3284 0.47 -1.7 3,791,343 - Pf6N2E2_3284 0.47 -0.9 3,791,527 - Pf6N2E2_3284 0.78 -0.1 3,791,644 - +1.2 3,791,644 - -2.1 3,791,644 - +0.7 3,791,755 - +0.9 3,791,804 + -2.1 3,791,804 + -1.1 3,791,805 - -0.4 3,791,805 - -0.5 3,791,805 - -0.5 3,791,805 - -0.7 3,791,805 - -0.2 3,791,805 - +0.0 3,791,805 - -1.5 3,791,805 - -1.0 3,791,805 - -2.0 3,791,805 - -0.3 3,791,805 - -0.6 3,791,805 - -1.0 3,791,805 - -1.5 3,791,805 - -0.8 3,791,805 - -0.5 3,791,805 - -0.7 3,791,805 - +1.2 3,791,805 - -1.8 3,791,805 - -0.0 3,791,823 + +0.0 3,791,824 - +0.2 3,791,824 - +0.9 3,791,828 - -3.6 3,792,032 - Pf6N2E2_3285 0.39 -0.9 3,792,032 - Pf6N2E2_3285 0.39 +1.4 3,792,032 - Pf6N2E2_3285 0.39 -0.3 3,792,032 - Pf6N2E2_3285 0.39 +0.0 3,792,032 - Pf6N2E2_3285 0.39 -0.5 3,792,032 - Pf6N2E2_3285 0.39 +0.2 3,792,671 - Pf6N2E2_3286 0.31 +2.1 3,793,514 - +1.6 3,793,552 - -1.7 3,793,552 - -1.1 3,793,552 - -2.4 3,793,601 - +0.3 3,793,601 - +0.3 3,793,601 - +1.5 3,793,601 - +0.6 3,793,621 - +0.4
Or see this region's nucleotide sequence