Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2854

Experiment: DEANONOate 0.000625 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	DEANONOate 0.000625 M
3,345,468	+		Pf6N2E2_2853	0.51	+0.4
3,345,468	+		Pf6N2E2_2853	0.51	+0.8
3,345,469	-		Pf6N2E2_2853	0.51	+2.6
3,345,519	+		Pf6N2E2_2853	0.55	+0.7
3,345,600	+		Pf6N2E2_2853	0.61	+0.7
3,345,601	-		Pf6N2E2_2853	0.61	-0.9
3,345,601	-		Pf6N2E2_2853	0.61	-0.4
3,345,601	-		Pf6N2E2_2853	0.61	+1.1
3,345,777	+		Pf6N2E2_2853	0.74	-0.1
3,345,778	-		Pf6N2E2_2853	0.74	+0.3
3,345,778	-		Pf6N2E2_2853	0.74	-0.0
3,345,804	+		Pf6N2E2_2853	0.76	+0.6
3,345,816	+		Pf6N2E2_2853	0.77	+1.4
3,345,816	+		Pf6N2E2_2853	0.77	+1.6
3,345,816	+		Pf6N2E2_2853	0.77	-0.0
3,345,816	+		Pf6N2E2_2853	0.77	-1.2
3,345,816	+		Pf6N2E2_2853	0.77	+1.0
3,345,817	-		Pf6N2E2_2853	0.77	-0.2
3,345,817	-		Pf6N2E2_2853	0.77	+1.7
3,345,972	+		Pf6N2E2_2853	0.88	-0.2
3,345,972	+		Pf6N2E2_2853	0.88	-0.2
3,345,972	+		Pf6N2E2_2853	0.88	-0.1
3,345,972	+		Pf6N2E2_2853	0.88	+0.4
3,345,973	-		Pf6N2E2_2853	0.88	+0.4
3,345,973	-		Pf6N2E2_2853	0.88	-2.6
3,346,198	-				+1.3
3,346,203	+				+0.3
3,346,203	+				+0.5
3,346,204	-				+0.9
3,346,204	-				-1.4
3,346,237	-				-2.0
3,346,237	-				-2.6
3,346,319	+				-0.2
3,346,320	-				+1.3
3,346,320	-				+1.5
3,346,396	+				+0.9
3,346,503	+		Pf6N2E2_2854	0.11	-0.1
3,346,516	-		Pf6N2E2_2854	0.12	-0.2
3,346,516	-		Pf6N2E2_2854	0.12	+0.6
3,346,524	-		Pf6N2E2_2854	0.13	+0.6
3,346,650	+		Pf6N2E2_2854	0.23	+0.6
3,347,031	+		Pf6N2E2_2854	0.54	-0.0
3,347,031	+		Pf6N2E2_2854	0.54	+0.8
3,347,031	+		Pf6N2E2_2854	0.54	-0.2
3,347,031	+		Pf6N2E2_2854	0.54	+0.9
3,347,031	+		Pf6N2E2_2854	0.54	+0.9
3,347,032	-		Pf6N2E2_2854	0.54	+0.1
3,347,032	-		Pf6N2E2_2854	0.54	+0.8
3,347,032	-		Pf6N2E2_2854	0.54	+1.2
3,347,032	-		Pf6N2E2_2854	0.54	+1.5
3,347,032	-		Pf6N2E2_2854	0.54	+0.2
3,347,091	+		Pf6N2E2_2854	0.59	-1.3
3,347,134	+		Pf6N2E2_2854	0.62	+1.5
3,347,563	-				+1.0
3,347,708	-				+1.6
3,347,754	+				-1.1
3,347,754	+				+0.6
3,347,754	+				-1.9
3,347,754	+				+0.2
3,347,755	-				-1.2
3,347,755	-				-1.7
3,347,755	-				+2.1
3,347,755	-				-0.6
3,347,758	+				+2.5
3,347,758	+				-0.9
3,347,874	-		Pf6N2E2_2855	0.32	-4.8
3,347,874	-		Pf6N2E2_2855	0.32	-0.0
3,347,874	-		Pf6N2E2_2855	0.32	+0.0
3,347,874	-		Pf6N2E2_2855	0.32	+0.3
3,348,023	+		Pf6N2E2_2855	0.75	-2.9
3,348,084	+				+2.0
3,348,084	+				-0.4
3,348,084	+				-0.5
3,348,085	-				-0.8
3,348,085	-				+0.7
3,348,085	-				-2.0
3,348,085	-				+1.6
3,348,086	+				-3.1
3,348,086	+				-0.5
3,348,087	-				+1.3
3,348,087	-				+2.1
3,348,087	-				+0.0
3,348,087	-				+1.2
3,348,087	-				+0.7
3,348,087	-				+0.9
3,348,087	-				+1.9
3,348,087	-				+0.8
3,348,087	-				+0.5
3,348,097	+				+0.3
3,348,097	+				-1.4
3,348,097	+				-0.2
3,348,097	+				-0.0
3,348,097	+				-0.7
3,348,097	+				-2.2
3,348,097	+				-0.2
3,348,098	-				-3.0
3,348,098	-				+1.3
3,348,098	-				+1.7
3,348,098	-				+0.3
3,348,098	-				+0.7
3,348,098	-				-0.3
3,348,098	-				-0.3
3,348,098	-				+0.6
3,348,098	-				-1.1
3,348,098	-				-0.6
3,348,098	-				-0.2
3,348,098	-				+0.7
3,348,098	-				+1.2
3,348,098	-				+1.2
3,348,098	-				+1.6
3,348,098	-				-3.7
3,348,101	+				+1.6
3,348,101	+				-3.0
3,348,101	+				+1.6
3,348,101	+				-2.5
3,348,101	+				-0.3
3,348,101	+				+2.7
3,348,102	-				-0.7
3,348,102	-				+0.2
3,348,102	-				+1.0
3,348,102	-				-1.2
3,348,137	+				-2.0
3,348,137	+				-1.8
3,348,137	+				+0.9
3,348,138	-				-0.5
3,348,138	-				-1.6
3,348,138	-				-3.0
3,348,138	-				+0.1
3,348,146	+				+0.0
3,348,146	+				+0.9
3,348,146	+				-0.9
3,348,147	-				+0.6
3,348,185	+				-2.0
3,348,185	+				+0.8
3,348,185	+				+0.5
3,348,186	-				+0.1
3,348,186	-				-2.2
3,348,337	-		Pf6N2E2_2856	0.37	+0.5
3,348,337	-		Pf6N2E2_2856	0.37	-1.6
3,348,513	+		Pf6N2E2_2856	0.77	+0.3
3,348,514	-		Pf6N2E2_2856	0.78	-0.1
3,348,514	-		Pf6N2E2_2856	0.78	-0.9
3,348,514	-		Pf6N2E2_2856	0.78	-0.2
3,348,514	-		Pf6N2E2_2856	0.78	+0.8
3,348,514	-		Pf6N2E2_2856	0.78	-2.3
3,348,561	+		Pf6N2E2_2856	0.89	-0.2
3,348,562	-		Pf6N2E2_2856	0.89	+0.5