Experiment: Cadmium chloride hemipentahydrate 0.000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4082 and Pf6N2E2_4083 are separated by 9 nucleotides Pf6N2E2_4083 and Pf6N2E2_4084 are separated by 385 nucleotides Pf6N2E2_4084 and Pf6N2E2_4085 are separated by 167 nucleotides
Pf6N2E2_4082 - Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21), at 4,758,994 to 4,759,416
_4082
Pf6N2E2_4083 - hypothetical protein, at 4,759,426 to 4,759,626
_4083
Pf6N2E2_4084 - Transcriptional regulator, at 4,760,012 to 4,760,929
_4084
Pf6N2E2_4085 - Aspartate ammonia-lyase (EC 4.3.1.1), at 4,761,097 to 4,762,533
_4085
Position (kb)
4760
4761 Strain fitness (log2 ratio)
-2
-1
0
1 at 4759.566 kb on - strand, within Pf6N2E2_4083 at 4759.606 kb on - strand, within Pf6N2E2_4083 at 4759.606 kb on - strand, within Pf6N2E2_4083 at 4759.606 kb on - strand, within Pf6N2E2_4083 at 4759.606 kb on - strand, within Pf6N2E2_4083 at 4759.606 kb on - strand, within Pf6N2E2_4083 at 4759.673 kb on + strand at 4759.674 kb on - strand at 4759.905 kb on + strand at 4759.905 kb on + strand at 4759.905 kb on + strand at 4760.256 kb on + strand, within Pf6N2E2_4084 at 4760.257 kb on - strand at 4760.257 kb on - strand, within Pf6N2E2_4084 at 4760.332 kb on - strand, within Pf6N2E2_4084 at 4760.481 kb on + strand, within Pf6N2E2_4084 at 4760.481 kb on + strand, within Pf6N2E2_4084 at 4760.482 kb on - strand, within Pf6N2E2_4084 at 4760.482 kb on - strand, within Pf6N2E2_4084 at 4760.482 kb on - strand, within Pf6N2E2_4084 at 4760.645 kb on + strand, within Pf6N2E2_4084 at 4760.645 kb on + strand, within Pf6N2E2_4084 at 4760.645 kb on + strand, within Pf6N2E2_4084 at 4760.645 kb on + strand, within Pf6N2E2_4084 at 4760.645 kb on + strand, within Pf6N2E2_4084 at 4760.646 kb on - strand, within Pf6N2E2_4084 at 4760.646 kb on - strand, within Pf6N2E2_4084 at 4760.646 kb on - strand, within Pf6N2E2_4084 at 4760.646 kb on - strand, within Pf6N2E2_4084 at 4761.039 kb on - strand at 4761.179 kb on - strand at 4761.502 kb on + strand, within Pf6N2E2_4085
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.000015625 M remove 4,759,566 - Pf6N2E2_4083 0.70 +1.3 4,759,606 - Pf6N2E2_4083 0.90 +0.7 4,759,606 - Pf6N2E2_4083 0.90 +0.3 4,759,606 - Pf6N2E2_4083 0.90 -0.1 4,759,606 - Pf6N2E2_4083 0.90 -0.6 4,759,606 - Pf6N2E2_4083 0.90 +0.6 4,759,673 + -0.8 4,759,674 - -0.5 4,759,905 + +1.4 4,759,905 + -0.5 4,759,905 + -1.0 4,760,256 + Pf6N2E2_4084 0.27 -1.6 4,760,257 - -0.3 4,760,257 - Pf6N2E2_4084 0.27 -0.9 4,760,332 - Pf6N2E2_4084 0.35 -2.4 4,760,481 + Pf6N2E2_4084 0.51 -1.1 4,760,481 + Pf6N2E2_4084 0.51 -1.2 4,760,482 - Pf6N2E2_4084 0.51 +0.5 4,760,482 - Pf6N2E2_4084 0.51 -1.2 4,760,482 - Pf6N2E2_4084 0.51 -0.6 4,760,645 + Pf6N2E2_4084 0.69 -0.7 4,760,645 + Pf6N2E2_4084 0.69 -1.7 4,760,645 + Pf6N2E2_4084 0.69 -1.7 4,760,645 + Pf6N2E2_4084 0.69 -0.8 4,760,645 + Pf6N2E2_4084 0.69 -0.3 4,760,646 - Pf6N2E2_4084 0.69 -0.4 4,760,646 - Pf6N2E2_4084 0.69 -0.9 4,760,646 - Pf6N2E2_4084 0.69 -0.4 4,760,646 - Pf6N2E2_4084 0.69 -1.0 4,761,039 - -0.3 4,761,179 - -0.5 4,761,502 + Pf6N2E2_4085 0.28 +0.5
Or see this region's nucleotide sequence