Experiment: Cadmium chloride hemipentahydrate 0.000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_561 and Pf6N2E2_562 overlap by 4 nucleotides Pf6N2E2_562 and Pf6N2E2_563 are separated by 379 nucleotides
Pf6N2E2_561 - Uncharacterized protein ImpA, at 634,545 to 635,627
_561
Pf6N2E2_562 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 635,624 to 636,577
_562
Pf6N2E2_563 - Serine transporter, at 636,957 to 638,237
_563
Position (kb) 635
636
637 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 634.823 kb on + strand, within Pf6N2E2_561 at 634.824 kb on - strand, within Pf6N2E2_561 at 635.241 kb on + strand, within Pf6N2E2_561 at 635.241 kb on + strand, within Pf6N2E2_561 at 635.242 kb on - strand, within Pf6N2E2_561 at 635.266 kb on - strand, within Pf6N2E2_561 at 635.266 kb on - strand, within Pf6N2E2_561 at 635.459 kb on - strand, within Pf6N2E2_561 at 635.459 kb on - strand, within Pf6N2E2_561 at 635.486 kb on + strand, within Pf6N2E2_561 at 635.708 kb on + strand at 635.708 kb on + strand at 636.036 kb on + strand, within Pf6N2E2_562 at 636.069 kb on + strand, within Pf6N2E2_562 at 636.070 kb on - strand, within Pf6N2E2_562 at 636.076 kb on + strand, within Pf6N2E2_562 at 636.222 kb on - strand, within Pf6N2E2_562 at 636.335 kb on + strand, within Pf6N2E2_562 at 636.335 kb on + strand, within Pf6N2E2_562 at 636.335 kb on + strand, within Pf6N2E2_562 at 636.335 kb on + strand, within Pf6N2E2_562 at 636.336 kb on - strand, within Pf6N2E2_562 at 636.336 kb on - strand, within Pf6N2E2_562 at 636.336 kb on - strand, within Pf6N2E2_562 at 636.534 kb on + strand at 636.535 kb on - strand at 636.590 kb on + strand at 636.590 kb on + strand at 636.590 kb on + strand at 636.590 kb on + strand at 636.590 kb on + strand at 636.591 kb on - strand at 636.591 kb on - strand at 636.612 kb on + strand at 636.613 kb on - strand at 636.613 kb on - strand at 636.627 kb on + strand at 636.628 kb on - strand at 636.628 kb on - strand at 636.628 kb on - strand at 636.628 kb on - strand at 636.658 kb on + strand at 636.658 kb on + strand at 636.658 kb on + strand at 636.658 kb on + strand at 636.658 kb on + strand at 636.659 kb on - strand at 636.661 kb on + strand at 636.661 kb on + strand at 636.690 kb on + strand at 636.694 kb on + strand at 636.694 kb on + strand at 636.694 kb on + strand at 636.695 kb on - strand at 636.695 kb on - strand at 636.720 kb on + strand at 636.721 kb on - strand at 636.787 kb on + strand at 636.809 kb on + strand at 636.809 kb on + strand at 636.815 kb on + strand at 637.082 kb on + strand at 637.083 kb on - strand at 637.083 kb on - strand at 637.083 kb on - strand at 637.167 kb on + strand, within Pf6N2E2_563 at 637.167 kb on + strand, within Pf6N2E2_563 at 637.167 kb on + strand, within Pf6N2E2_563 at 637.168 kb on - strand, within Pf6N2E2_563 at 637.168 kb on - strand, within Pf6N2E2_563 at 637.168 kb on - strand, within Pf6N2E2_563 at 637.168 kb on - strand, within Pf6N2E2_563 at 637.281 kb on + strand, within Pf6N2E2_563 at 637.282 kb on - strand, within Pf6N2E2_563 at 637.282 kb on - strand, within Pf6N2E2_563 at 637.314 kb on + strand, within Pf6N2E2_563 at 637.314 kb on + strand, within Pf6N2E2_563 at 637.315 kb on - strand, within Pf6N2E2_563 at 637.315 kb on - strand, within Pf6N2E2_563 at 637.315 kb on - strand, within Pf6N2E2_563 at 637.368 kb on - strand, within Pf6N2E2_563
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.000015625 M remove 634,823 + Pf6N2E2_561 0.26 -0.6 634,824 - Pf6N2E2_561 0.26 -0.1 635,241 + Pf6N2E2_561 0.64 +1.6 635,241 + Pf6N2E2_561 0.64 +0.2 635,242 - Pf6N2E2_561 0.64 +0.3 635,266 - Pf6N2E2_561 0.67 -0.4 635,266 - Pf6N2E2_561 0.67 +1.0 635,459 - Pf6N2E2_561 0.84 -0.3 635,459 - Pf6N2E2_561 0.84 -0.1 635,486 + Pf6N2E2_561 0.87 -0.2 635,708 + -1.3 635,708 + +0.3 636,036 + Pf6N2E2_562 0.43 -0.9 636,069 + Pf6N2E2_562 0.47 +0.8 636,070 - Pf6N2E2_562 0.47 -0.8 636,076 + Pf6N2E2_562 0.47 -0.4 636,222 - Pf6N2E2_562 0.63 +1.3 636,335 + Pf6N2E2_562 0.75 +1.0 636,335 + Pf6N2E2_562 0.75 +1.5 636,335 + Pf6N2E2_562 0.75 +1.9 636,335 + Pf6N2E2_562 0.75 +1.6 636,336 - Pf6N2E2_562 0.75 +0.6 636,336 - Pf6N2E2_562 0.75 +0.7 636,336 - Pf6N2E2_562 0.75 -0.0 636,534 + +1.5 636,535 - +1.0 636,590 + +1.3 636,590 + +1.0 636,590 + +1.0 636,590 + +2.2 636,590 + +1.8 636,591 - +0.5 636,591 - +1.1 636,612 + +2.3 636,613 - +0.9 636,613 - +1.4 636,627 + +0.2 636,628 - +0.3 636,628 - +0.3 636,628 - +1.3 636,628 - +1.0 636,658 + +1.5 636,658 + +1.5 636,658 + +0.5 636,658 + +1.6 636,658 + +1.1 636,659 - +1.0 636,661 + +1.6 636,661 + +0.6 636,690 + +1.7 636,694 + +1.2 636,694 + +1.1 636,694 + +2.3 636,695 - +0.5 636,695 - -0.3 636,720 + +1.2 636,721 - +0.8 636,787 + +0.6 636,809 + +2.8 636,809 + +3.9 636,815 + +3.3 637,082 + +3.3 637,083 - +2.4 637,083 - +3.4 637,083 - +3.5 637,167 + Pf6N2E2_563 0.16 +3.7 637,167 + Pf6N2E2_563 0.16 +3.2 637,167 + Pf6N2E2_563 0.16 +3.1 637,168 - Pf6N2E2_563 0.16 +3.6 637,168 - Pf6N2E2_563 0.16 +3.1 637,168 - Pf6N2E2_563 0.16 +3.8 637,168 - Pf6N2E2_563 0.16 +3.4 637,281 + Pf6N2E2_563 0.25 +4.2 637,282 - Pf6N2E2_563 0.25 +3.8 637,282 - Pf6N2E2_563 0.25 +2.6 637,314 + Pf6N2E2_563 0.28 +4.2 637,314 + Pf6N2E2_563 0.28 +3.5 637,315 - Pf6N2E2_563 0.28 +3.5 637,315 - Pf6N2E2_563 0.28 +3.7 637,315 - Pf6N2E2_563 0.28 +3.2 637,368 - Pf6N2E2_563 0.32 +3.5
Or see this region's nucleotide sequence