Experiment: Cadmium chloride hemipentahydrate 0.000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4094 and Pf6N2E2_4095 are separated by 193 nucleotides Pf6N2E2_4095 and Pf6N2E2_4096 are separated by 88 nucleotides
Pf6N2E2_4094 - Radical SAM domain protein, at 4,773,645 to 4,774,703
_4094
Pf6N2E2_4095 - Carbonic anhydrase (EC 4.2.1.1), at 4,774,897 to 4,775,628
_4095
Pf6N2E2_4096 - Sulfate transporter family protein in cluster with carbonic anhydrase, at 4,775,717 to 4,777,243
_4096
Position (kb) 4774
4775
4776 Strain fitness (log2 ratio) -1
0
1
2
3 at 4773.906 kb on + strand, within Pf6N2E2_4094 at 4774.002 kb on + strand, within Pf6N2E2_4094 at 4774.044 kb on + strand, within Pf6N2E2_4094 at 4774.044 kb on + strand, within Pf6N2E2_4094 at 4774.053 kb on - strand, within Pf6N2E2_4094 at 4774.238 kb on + strand, within Pf6N2E2_4094 at 4774.238 kb on + strand, within Pf6N2E2_4094 at 4774.239 kb on - strand, within Pf6N2E2_4094 at 4774.239 kb on - strand, within Pf6N2E2_4094 at 4774.413 kb on + strand, within Pf6N2E2_4094 at 4774.413 kb on + strand, within Pf6N2E2_4094 at 4774.413 kb on + strand, within Pf6N2E2_4094 at 4774.413 kb on + strand, within Pf6N2E2_4094 at 4774.414 kb on - strand, within Pf6N2E2_4094 at 4774.414 kb on - strand, within Pf6N2E2_4094 at 4774.477 kb on - strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.536 kb on + strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.537 kb on - strand, within Pf6N2E2_4094 at 4774.647 kb on + strand at 4774.706 kb on - strand at 4774.776 kb on + strand at 4774.776 kb on + strand at 4774.776 kb on + strand at 4774.801 kb on + strand at 4774.802 kb on - strand at 4774.816 kb on - strand at 4774.911 kb on + strand at 4774.912 kb on - strand at 4774.980 kb on + strand, within Pf6N2E2_4095 at 4774.980 kb on + strand, within Pf6N2E2_4095 at 4774.980 kb on + strand, within Pf6N2E2_4095 at 4774.980 kb on + strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4774.981 kb on - strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.124 kb on + strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.125 kb on - strand, within Pf6N2E2_4095 at 4775.180 kb on - strand, within Pf6N2E2_4095 at 4775.180 kb on - strand, within Pf6N2E2_4095 at 4775.218 kb on + strand, within Pf6N2E2_4095 at 4775.219 kb on - strand at 4775.226 kb on - strand, within Pf6N2E2_4095 at 4775.518 kb on + strand, within Pf6N2E2_4095 at 4775.518 kb on + strand, within Pf6N2E2_4095 at 4775.518 kb on + strand, within Pf6N2E2_4095 at 4775.519 kb on - strand, within Pf6N2E2_4095 at 4775.519 kb on - strand, within Pf6N2E2_4095 at 4775.519 kb on - strand, within Pf6N2E2_4095 at 4775.519 kb on - strand, within Pf6N2E2_4095 at 4775.519 kb on - strand, within Pf6N2E2_4095 at 4775.548 kb on + strand, within Pf6N2E2_4095 at 4775.548 kb on + strand, within Pf6N2E2_4095 at 4775.549 kb on - strand, within Pf6N2E2_4095 at 4775.549 kb on - strand, within Pf6N2E2_4095 at 4775.549 kb on - strand, within Pf6N2E2_4095 at 4775.626 kb on + strand at 4775.627 kb on - strand at 4775.627 kb on - strand at 4775.636 kb on + strand at 4775.730 kb on + strand at 4775.730 kb on + strand at 4775.730 kb on + strand at 4775.731 kb on - strand at 4775.731 kb on - strand at 4775.754 kb on + strand at 4775.754 kb on + strand at 4775.754 kb on + strand at 4775.754 kb on + strand at 4775.755 kb on - strand at 4775.755 kb on - strand at 4775.755 kb on - strand at 4775.755 kb on - strand at 4775.755 kb on - strand at 4776.065 kb on + strand, within Pf6N2E2_4096 at 4776.065 kb on + strand, within Pf6N2E2_4096 at 4776.066 kb on - strand, within Pf6N2E2_4096 at 4776.066 kb on - strand, within Pf6N2E2_4096 at 4776.099 kb on + strand, within Pf6N2E2_4096 at 4776.099 kb on + strand, within Pf6N2E2_4096 at 4776.099 kb on + strand, within Pf6N2E2_4096 at 4776.099 kb on + strand, within Pf6N2E2_4096 at 4776.099 kb on + strand, within Pf6N2E2_4096 at 4776.100 kb on - strand, within Pf6N2E2_4096 at 4776.100 kb on - strand, within Pf6N2E2_4096 at 4776.100 kb on - strand, within Pf6N2E2_4096 at 4776.100 kb on - strand, within Pf6N2E2_4096 at 4776.340 kb on - strand, within Pf6N2E2_4096 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.562 kb on + strand, within Pf6N2E2_4096 at 4776.563 kb on - strand, within Pf6N2E2_4096 at 4776.563 kb on - strand, within Pf6N2E2_4096
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.000015625 M remove 4,773,906 + Pf6N2E2_4094 0.25 +0.1 4,774,002 + Pf6N2E2_4094 0.34 +0.4 4,774,044 + Pf6N2E2_4094 0.38 +0.6 4,774,044 + Pf6N2E2_4094 0.38 +0.9 4,774,053 - Pf6N2E2_4094 0.39 +0.1 4,774,238 + Pf6N2E2_4094 0.56 +0.0 4,774,238 + Pf6N2E2_4094 0.56 +0.4 4,774,239 - Pf6N2E2_4094 0.56 +0.3 4,774,239 - Pf6N2E2_4094 0.56 -0.4 4,774,413 + Pf6N2E2_4094 0.73 +0.6 4,774,413 + Pf6N2E2_4094 0.73 -0.4 4,774,413 + Pf6N2E2_4094 0.73 -0.9 4,774,413 + Pf6N2E2_4094 0.73 +0.6 4,774,414 - Pf6N2E2_4094 0.73 +0.9 4,774,414 - Pf6N2E2_4094 0.73 +0.6 4,774,477 - Pf6N2E2_4094 0.79 +1.4 4,774,536 + Pf6N2E2_4094 0.84 -0.2 4,774,536 + Pf6N2E2_4094 0.84 +0.2 4,774,536 + Pf6N2E2_4094 0.84 -0.4 4,774,536 + Pf6N2E2_4094 0.84 -0.4 4,774,536 + Pf6N2E2_4094 0.84 +0.3 4,774,536 + Pf6N2E2_4094 0.84 +0.5 4,774,536 + Pf6N2E2_4094 0.84 +0.1 4,774,536 + Pf6N2E2_4094 0.84 +0.5 4,774,536 + Pf6N2E2_4094 0.84 +0.2 4,774,537 - Pf6N2E2_4094 0.84 +0.8 4,774,537 - Pf6N2E2_4094 0.84 +1.0 4,774,537 - Pf6N2E2_4094 0.84 +0.3 4,774,537 - Pf6N2E2_4094 0.84 +0.8 4,774,537 - Pf6N2E2_4094 0.84 +0.6 4,774,537 - Pf6N2E2_4094 0.84 +0.6 4,774,537 - Pf6N2E2_4094 0.84 +1.1 4,774,537 - Pf6N2E2_4094 0.84 +0.6 4,774,537 - Pf6N2E2_4094 0.84 +0.3 4,774,647 + -0.5 4,774,706 - +0.9 4,774,776 + +0.9 4,774,776 + +0.2 4,774,776 + -0.5 4,774,801 + +1.8 4,774,802 - +1.5 4,774,816 - +0.7 4,774,911 + +0.7 4,774,912 - +0.9 4,774,980 + Pf6N2E2_4095 0.11 +3.6 4,774,980 + Pf6N2E2_4095 0.11 +1.5 4,774,980 + Pf6N2E2_4095 0.11 +1.4 4,774,980 + Pf6N2E2_4095 0.11 -0.9 4,774,981 - Pf6N2E2_4095 0.11 +0.6 4,774,981 - Pf6N2E2_4095 0.11 +0.3 4,774,981 - Pf6N2E2_4095 0.11 +1.4 4,774,981 - Pf6N2E2_4095 0.11 +1.2 4,774,981 - Pf6N2E2_4095 0.11 +1.4 4,774,981 - Pf6N2E2_4095 0.11 +1.2 4,774,981 - Pf6N2E2_4095 0.11 +0.8 4,775,124 + Pf6N2E2_4095 0.31 +1.7 4,775,124 + Pf6N2E2_4095 0.31 +1.8 4,775,124 + Pf6N2E2_4095 0.31 +0.5 4,775,124 + Pf6N2E2_4095 0.31 +0.8 4,775,124 + Pf6N2E2_4095 0.31 +0.2 4,775,124 + Pf6N2E2_4095 0.31 +1.4 4,775,124 + Pf6N2E2_4095 0.31 +1.1 4,775,125 - Pf6N2E2_4095 0.31 +1.7 4,775,125 - Pf6N2E2_4095 0.31 +0.1 4,775,125 - Pf6N2E2_4095 0.31 +1.3 4,775,125 - Pf6N2E2_4095 0.31 +1.0 4,775,125 - Pf6N2E2_4095 0.31 +0.9 4,775,125 - Pf6N2E2_4095 0.31 +1.4 4,775,125 - Pf6N2E2_4095 0.31 +1.8 4,775,125 - Pf6N2E2_4095 0.31 +1.6 4,775,125 - Pf6N2E2_4095 0.31 +1.6 4,775,125 - Pf6N2E2_4095 0.31 +1.7 4,775,125 - Pf6N2E2_4095 0.31 +1.3 4,775,125 - Pf6N2E2_4095 0.31 +1.5 4,775,180 - Pf6N2E2_4095 0.39 +0.8 4,775,180 - Pf6N2E2_4095 0.39 +0.8 4,775,218 + Pf6N2E2_4095 0.44 +0.6 4,775,219 - +3.3 4,775,226 - Pf6N2E2_4095 0.45 +1.1 4,775,518 + Pf6N2E2_4095 0.85 +1.3 4,775,518 + Pf6N2E2_4095 0.85 +1.6 4,775,518 + Pf6N2E2_4095 0.85 -0.8 4,775,519 - Pf6N2E2_4095 0.85 +1.4 4,775,519 - Pf6N2E2_4095 0.85 -0.7 4,775,519 - Pf6N2E2_4095 0.85 +1.5 4,775,519 - Pf6N2E2_4095 0.85 +0.8 4,775,519 - Pf6N2E2_4095 0.85 +0.8 4,775,548 + Pf6N2E2_4095 0.89 +2.3 4,775,548 + Pf6N2E2_4095 0.89 +0.5 4,775,549 - Pf6N2E2_4095 0.89 +1.7 4,775,549 - Pf6N2E2_4095 0.89 +0.7 4,775,549 - Pf6N2E2_4095 0.89 +1.8 4,775,626 + +0.5 4,775,627 - +2.2 4,775,627 - +1.9 4,775,636 + -1.3 4,775,730 + +0.9 4,775,730 + +0.7 4,775,730 + +1.1 4,775,731 - +1.7 4,775,731 - +1.2 4,775,754 + +1.3 4,775,754 + +1.3 4,775,754 + +1.2 4,775,754 + +1.7 4,775,755 - +1.5 4,775,755 - +0.9 4,775,755 - +1.3 4,775,755 - +1.6 4,775,755 - +1.5 4,776,065 + Pf6N2E2_4096 0.23 +1.2 4,776,065 + Pf6N2E2_4096 0.23 +2.8 4,776,066 - Pf6N2E2_4096 0.23 +1.7 4,776,066 - Pf6N2E2_4096 0.23 +1.5 4,776,099 + Pf6N2E2_4096 0.25 +0.8 4,776,099 + Pf6N2E2_4096 0.25 +1.1 4,776,099 + Pf6N2E2_4096 0.25 +1.3 4,776,099 + Pf6N2E2_4096 0.25 +2.0 4,776,099 + Pf6N2E2_4096 0.25 +1.3 4,776,100 - Pf6N2E2_4096 0.25 +1.5 4,776,100 - Pf6N2E2_4096 0.25 +1.4 4,776,100 - Pf6N2E2_4096 0.25 +0.8 4,776,100 - Pf6N2E2_4096 0.25 +1.2 4,776,340 - Pf6N2E2_4096 0.41 +2.0 4,776,511 + Pf6N2E2_4096 0.52 +0.9 4,776,511 + Pf6N2E2_4096 0.52 +1.1 4,776,511 + Pf6N2E2_4096 0.52 +0.9 4,776,512 - Pf6N2E2_4096 0.52 +0.7 4,776,512 - Pf6N2E2_4096 0.52 +1.7 4,776,512 - Pf6N2E2_4096 0.52 +1.5 4,776,562 + Pf6N2E2_4096 0.55 +1.6 4,776,563 - Pf6N2E2_4096 0.55 +0.6 4,776,563 - Pf6N2E2_4096 0.55 +1.4
Or see this region's nucleotide sequence