Experiment: Cadmium chloride hemipentahydrate 0.000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3626 and Pf6N2E2_3627 are separated by 42 nucleotides Pf6N2E2_3627 and Pf6N2E2_3628 are separated by 19 nucleotides
Pf6N2E2_3626 - Predicted signal transduction protein, at 4,221,644 to 4,223,182
_3626
Pf6N2E2_3627 - Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1), at 4,223,225 to 4,224,040
_3627
Pf6N2E2_3628 - Phosphatidylserine decarboxylase (EC 4.1.1.65), at 4,224,060 to 4,224,920
_3628
Position (kb)
4223
4224
4225 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4222.493 kb on + strand, within Pf6N2E2_3626 at 4222.493 kb on + strand, within Pf6N2E2_3626 at 4222.493 kb on + strand, within Pf6N2E2_3626 at 4222.493 kb on + strand, within Pf6N2E2_3626 at 4222.494 kb on - strand, within Pf6N2E2_3626 at 4222.509 kb on - strand, within Pf6N2E2_3626 at 4222.509 kb on - strand, within Pf6N2E2_3626 at 4222.845 kb on + strand, within Pf6N2E2_3626 at 4222.845 kb on + strand, within Pf6N2E2_3626 at 4222.845 kb on + strand, within Pf6N2E2_3626 at 4222.891 kb on + strand, within Pf6N2E2_3626 at 4222.892 kb on - strand, within Pf6N2E2_3626 at 4222.892 kb on - strand, within Pf6N2E2_3626 at 4222.892 kb on - strand, within Pf6N2E2_3626 at 4222.911 kb on + strand, within Pf6N2E2_3626 at 4222.911 kb on + strand, within Pf6N2E2_3626 at 4222.912 kb on - strand, within Pf6N2E2_3626 at 4222.912 kb on - strand, within Pf6N2E2_3626 at 4222.912 kb on - strand, within Pf6N2E2_3626 at 4222.912 kb on - strand, within Pf6N2E2_3626 at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.112 kb on + strand at 4223.113 kb on - strand at 4223.113 kb on - strand at 4223.113 kb on - strand at 4223.113 kb on - strand at 4223.113 kb on - strand at 4223.158 kb on + strand at 4223.158 kb on + strand at 4223.158 kb on + strand at 4223.158 kb on + strand at 4223.159 kb on - strand at 4223.159 kb on - strand at 4223.159 kb on - strand at 4223.159 kb on - strand at 4223.164 kb on + strand at 4223.189 kb on + strand at 4223.189 kb on + strand at 4223.190 kb on - strand at 4223.190 kb on - strand at 4223.474 kb on + strand, within Pf6N2E2_3627 at 4223.474 kb on + strand, within Pf6N2E2_3627 at 4223.474 kb on + strand, within Pf6N2E2_3627 at 4223.474 kb on + strand, within Pf6N2E2_3627 at 4223.474 kb on + strand, within Pf6N2E2_3627 at 4223.478 kb on + strand, within Pf6N2E2_3627 at 4223.478 kb on + strand, within Pf6N2E2_3627 at 4223.483 kb on + strand, within Pf6N2E2_3627 at 4223.483 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.552 kb on + strand, within Pf6N2E2_3627 at 4223.681 kb on + strand, within Pf6N2E2_3627 at 4223.744 kb on + strand, within Pf6N2E2_3627 at 4223.744 kb on + strand, within Pf6N2E2_3627 at 4223.744 kb on + strand, within Pf6N2E2_3627 at 4223.942 kb on + strand, within Pf6N2E2_3627 at 4223.942 kb on + strand, within Pf6N2E2_3627 at 4223.942 kb on + strand, within Pf6N2E2_3627 at 4224.048 kb on + strand at 4224.048 kb on + strand at 4224.048 kb on + strand at 4224.922 kb on + strand at 4224.923 kb on - strand at 4224.949 kb on - strand at 4225.035 kb on + strand at 4225.035 kb on + strand at 4225.035 kb on + strand at 4225.035 kb on + strand at 4225.035 kb on + strand at 4225.035 kb on + strand at 4225.036 kb on - strand at 4225.036 kb on - strand at 4225.036 kb on - strand at 4225.036 kb on - strand at 4225.036 kb on - strand at 4225.036 kb on - strand at 4225.039 kb on + strand at 4225.039 kb on + strand at 4225.039 kb on + strand at 4225.039 kb on + strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand at 4225.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.000015625 M remove 4,222,493 + Pf6N2E2_3626 0.55 -0.3 4,222,493 + Pf6N2E2_3626 0.55 +0.0 4,222,493 + Pf6N2E2_3626 0.55 +0.1 4,222,493 + Pf6N2E2_3626 0.55 +0.5 4,222,494 - Pf6N2E2_3626 0.55 +0.3 4,222,509 - Pf6N2E2_3626 0.56 +0.0 4,222,509 - Pf6N2E2_3626 0.56 +0.0 4,222,845 + Pf6N2E2_3626 0.78 +0.1 4,222,845 + Pf6N2E2_3626 0.78 -0.2 4,222,845 + Pf6N2E2_3626 0.78 +0.0 4,222,891 + Pf6N2E2_3626 0.81 +0.8 4,222,892 - Pf6N2E2_3626 0.81 +0.3 4,222,892 - Pf6N2E2_3626 0.81 +0.1 4,222,892 - Pf6N2E2_3626 0.81 +0.4 4,222,911 + Pf6N2E2_3626 0.82 -0.7 4,222,911 + Pf6N2E2_3626 0.82 +0.2 4,222,912 - Pf6N2E2_3626 0.82 -0.1 4,222,912 - Pf6N2E2_3626 0.82 -0.5 4,222,912 - Pf6N2E2_3626 0.82 -0.5 4,222,912 - Pf6N2E2_3626 0.82 -1.2 4,223,112 + +0.3 4,223,112 + -0.2 4,223,112 + +0.2 4,223,112 + +0.6 4,223,112 + +1.2 4,223,112 + -0.5 4,223,112 + +0.7 4,223,113 - -0.1 4,223,113 - +0.6 4,223,113 - -0.9 4,223,113 - -0.1 4,223,113 - -0.4 4,223,158 + +0.5 4,223,158 + +0.8 4,223,158 + +0.0 4,223,158 + +0.1 4,223,159 - +0.3 4,223,159 - +1.1 4,223,159 - +0.1 4,223,159 - +1.4 4,223,164 + +0.3 4,223,189 + +0.6 4,223,189 + -0.2 4,223,190 - -0.2 4,223,190 - +1.2 4,223,474 + Pf6N2E2_3627 0.31 -0.6 4,223,474 + Pf6N2E2_3627 0.31 -0.5 4,223,474 + Pf6N2E2_3627 0.31 +0.1 4,223,474 + Pf6N2E2_3627 0.31 -0.4 4,223,474 + Pf6N2E2_3627 0.31 -2.6 4,223,478 + Pf6N2E2_3627 0.31 -0.8 4,223,478 + Pf6N2E2_3627 0.31 -0.6 4,223,483 + Pf6N2E2_3627 0.32 -3.3 4,223,483 + Pf6N2E2_3627 0.32 -0.6 4,223,552 + Pf6N2E2_3627 0.40 -0.8 4,223,552 + Pf6N2E2_3627 0.40 -1.0 4,223,552 + Pf6N2E2_3627 0.40 -1.1 4,223,552 + Pf6N2E2_3627 0.40 -1.3 4,223,552 + Pf6N2E2_3627 0.40 -0.6 4,223,552 + Pf6N2E2_3627 0.40 -2.2 4,223,552 + Pf6N2E2_3627 0.40 -0.0 4,223,552 + Pf6N2E2_3627 0.40 -0.9 4,223,552 + Pf6N2E2_3627 0.40 -0.2 4,223,552 + Pf6N2E2_3627 0.40 -1.0 4,223,552 + Pf6N2E2_3627 0.40 -1.0 4,223,552 + Pf6N2E2_3627 0.40 -0.3 4,223,552 + Pf6N2E2_3627 0.40 -1.4 4,223,681 + Pf6N2E2_3627 0.56 +0.2 4,223,744 + Pf6N2E2_3627 0.64 -0.6 4,223,744 + Pf6N2E2_3627 0.64 -0.1 4,223,744 + Pf6N2E2_3627 0.64 +0.6 4,223,942 + Pf6N2E2_3627 0.88 -1.1 4,223,942 + Pf6N2E2_3627 0.88 -1.2 4,223,942 + Pf6N2E2_3627 0.88 -2.4 4,224,048 + +0.6 4,224,048 + -0.3 4,224,048 + +1.5 4,224,922 + +0.2 4,224,923 - +0.2 4,224,949 - +0.2 4,225,035 + -0.0 4,225,035 + +0.2 4,225,035 + +0.1 4,225,035 + +0.3 4,225,035 + +0.3 4,225,035 + -0.9 4,225,036 - +0.7 4,225,036 - -0.5 4,225,036 - +0.6 4,225,036 - -0.5 4,225,036 - +0.2 4,225,036 - -0.8 4,225,039 + +0.3 4,225,039 + +1.2 4,225,039 + +0.7 4,225,039 + +0.4 4,225,040 - -1.4 4,225,040 - -0.3 4,225,040 - -0.2 4,225,040 - +0.4 4,225,040 - +1.1 4,225,040 - +0.3 4,225,040 - -0.3 4,225,040 - +1.0 4,225,040 - -0.6 4,225,040 - +0.2
Or see this region's nucleotide sequence