Experiment: Cadmium chloride hemipentahydrate 0.000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2935 and Pf6N2E2_2936 are separated by 148 nucleotides Pf6N2E2_2936 and Pf6N2E2_2937 are separated by 266 nucleotides
Pf6N2E2_2935 - NAD(FAD)-utilizing dehydrogenase, sll0175 homolog, at 3,425,682 to 3,427,295
_2935
Pf6N2E2_2936 - Cysteine synthase (EC 2.5.1.47), at 3,427,444 to 3,428,538
_2936
Pf6N2E2_2937 - Na+/H+ antiporter NhaA type, at 3,428,805 to 3,429,992
_2937
Position (kb)
3427
3428
3429 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3426.519 kb on + strand, within Pf6N2E2_2935 at 3426.519 kb on + strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.520 kb on - strand, within Pf6N2E2_2935 at 3426.600 kb on + strand, within Pf6N2E2_2935 at 3426.600 kb on + strand, within Pf6N2E2_2935 at 3426.633 kb on + strand, within Pf6N2E2_2935 at 3426.672 kb on + strand, within Pf6N2E2_2935 at 3426.820 kb on - strand, within Pf6N2E2_2935 at 3426.893 kb on + strand, within Pf6N2E2_2935 at 3426.893 kb on + strand, within Pf6N2E2_2935 at 3426.893 kb on + strand, within Pf6N2E2_2935 at 3426.893 kb on + strand, within Pf6N2E2_2935 at 3426.893 kb on + strand, within Pf6N2E2_2935 at 3426.897 kb on + strand, within Pf6N2E2_2935 at 3426.897 kb on + strand, within Pf6N2E2_2935 at 3426.897 kb on + strand, within Pf6N2E2_2935 at 3426.897 kb on + strand, within Pf6N2E2_2935 at 3426.898 kb on - strand, within Pf6N2E2_2935 at 3426.898 kb on - strand, within Pf6N2E2_2935 at 3426.975 kb on + strand, within Pf6N2E2_2935 at 3427.209 kb on + strand at 3427.314 kb on + strand at 3427.314 kb on + strand at 3427.314 kb on + strand at 3427.314 kb on + strand at 3427.314 kb on + strand at 3427.315 kb on - strand at 3427.315 kb on - strand at 3427.315 kb on - strand at 3427.315 kb on - strand at 3427.315 kb on - strand at 3427.318 kb on + strand at 3427.318 kb on + strand at 3427.318 kb on + strand at 3427.318 kb on + strand at 3427.319 kb on - strand at 3427.319 kb on - strand at 3427.377 kb on + strand at 3427.532 kb on + strand at 3427.562 kb on + strand, within Pf6N2E2_2936 at 3427.563 kb on - strand, within Pf6N2E2_2936 at 3427.565 kb on + strand, within Pf6N2E2_2936 at 3427.565 kb on + strand, within Pf6N2E2_2936 at 3427.566 kb on - strand, within Pf6N2E2_2936 at 3427.718 kb on + strand, within Pf6N2E2_2936 at 3427.719 kb on - strand, within Pf6N2E2_2936 at 3427.719 kb on - strand at 3427.865 kb on + strand, within Pf6N2E2_2936 at 3427.865 kb on + strand, within Pf6N2E2_2936 at 3427.866 kb on - strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.937 kb on + strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.938 kb on - strand, within Pf6N2E2_2936 at 3427.959 kb on + strand, within Pf6N2E2_2936 at 3428.081 kb on + strand, within Pf6N2E2_2936 at 3428.142 kb on - strand, within Pf6N2E2_2936 at 3428.142 kb on - strand, within Pf6N2E2_2936 at 3428.142 kb on - strand, within Pf6N2E2_2936 at 3428.152 kb on - strand, within Pf6N2E2_2936 at 3428.183 kb on + strand, within Pf6N2E2_2936 at 3428.183 kb on + strand, within Pf6N2E2_2936 at 3428.184 kb on - strand, within Pf6N2E2_2936 at 3428.267 kb on + strand, within Pf6N2E2_2936 at 3428.267 kb on + strand, within Pf6N2E2_2936 at 3428.268 kb on - strand, within Pf6N2E2_2936 at 3428.268 kb on - strand, within Pf6N2E2_2936 at 3428.305 kb on + strand, within Pf6N2E2_2936 at 3428.348 kb on + strand, within Pf6N2E2_2936 at 3428.417 kb on + strand, within Pf6N2E2_2936 at 3428.418 kb on - strand, within Pf6N2E2_2936 at 3428.466 kb on + strand at 3428.466 kb on + strand at 3428.466 kb on + strand at 3428.467 kb on - strand at 3428.627 kb on - strand at 3428.659 kb on + strand at 3428.659 kb on + strand at 3428.659 kb on + strand at 3428.659 kb on + strand at 3428.659 kb on + strand at 3428.660 kb on - strand at 3428.669 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium chloride hemipentahydrate 0.000015625 M remove 3,426,519 + Pf6N2E2_2935 0.52 +0.4 3,426,519 + Pf6N2E2_2935 0.52 +0.8 3,426,520 - Pf6N2E2_2935 0.52 +0.3 3,426,520 - Pf6N2E2_2935 0.52 +0.6 3,426,520 - Pf6N2E2_2935 0.52 +1.2 3,426,520 - Pf6N2E2_2935 0.52 +0.3 3,426,520 - Pf6N2E2_2935 0.52 +0.8 3,426,520 - Pf6N2E2_2935 0.52 -2.1 3,426,520 - Pf6N2E2_2935 0.52 -0.3 3,426,520 - Pf6N2E2_2935 0.52 -0.3 3,426,600 + Pf6N2E2_2935 0.57 +1.2 3,426,600 + Pf6N2E2_2935 0.57 +0.2 3,426,633 + Pf6N2E2_2935 0.59 -0.4 3,426,672 + Pf6N2E2_2935 0.61 +1.2 3,426,820 - Pf6N2E2_2935 0.71 -0.7 3,426,893 + Pf6N2E2_2935 0.75 -0.1 3,426,893 + Pf6N2E2_2935 0.75 -0.2 3,426,893 + Pf6N2E2_2935 0.75 +0.8 3,426,893 + Pf6N2E2_2935 0.75 +0.9 3,426,893 + Pf6N2E2_2935 0.75 -0.4 3,426,897 + Pf6N2E2_2935 0.75 +0.7 3,426,897 + Pf6N2E2_2935 0.75 -0.0 3,426,897 + Pf6N2E2_2935 0.75 +0.8 3,426,897 + Pf6N2E2_2935 0.75 +0.0 3,426,898 - Pf6N2E2_2935 0.75 -0.3 3,426,898 - Pf6N2E2_2935 0.75 +0.3 3,426,975 + Pf6N2E2_2935 0.80 +0.3 3,427,209 + +0.4 3,427,314 + +0.8 3,427,314 + +0.5 3,427,314 + +1.0 3,427,314 + +0.3 3,427,314 + +0.3 3,427,315 - +0.7 3,427,315 - +1.1 3,427,315 - +0.1 3,427,315 - +1.2 3,427,315 - +0.2 3,427,318 + +0.5 3,427,318 + +0.3 3,427,318 + +0.1 3,427,318 + -0.3 3,427,319 - +3.1 3,427,319 - +1.0 3,427,377 + -1.4 3,427,532 + +2.3 3,427,562 + Pf6N2E2_2936 0.11 +3.1 3,427,563 - Pf6N2E2_2936 0.11 +2.9 3,427,565 + Pf6N2E2_2936 0.11 +3.6 3,427,565 + Pf6N2E2_2936 0.11 +3.3 3,427,566 - Pf6N2E2_2936 0.11 +2.9 3,427,718 + Pf6N2E2_2936 0.25 +3.1 3,427,719 - Pf6N2E2_2936 0.25 +3.7 3,427,719 - +3.6 3,427,865 + Pf6N2E2_2936 0.38 +3.5 3,427,865 + Pf6N2E2_2936 0.38 +3.1 3,427,866 - Pf6N2E2_2936 0.39 +2.8 3,427,937 + Pf6N2E2_2936 0.45 +2.6 3,427,937 + Pf6N2E2_2936 0.45 +3.1 3,427,937 + Pf6N2E2_2936 0.45 +3.2 3,427,937 + Pf6N2E2_2936 0.45 +3.3 3,427,937 + Pf6N2E2_2936 0.45 +3.2 3,427,937 + Pf6N2E2_2936 0.45 +3.2 3,427,937 + Pf6N2E2_2936 0.45 +3.3 3,427,938 - Pf6N2E2_2936 0.45 +2.8 3,427,938 - Pf6N2E2_2936 0.45 +2.7 3,427,938 - Pf6N2E2_2936 0.45 +3.2 3,427,938 - Pf6N2E2_2936 0.45 +1.9 3,427,938 - Pf6N2E2_2936 0.45 +3.2 3,427,938 - Pf6N2E2_2936 0.45 +3.2 3,427,959 + Pf6N2E2_2936 0.47 +3.9 3,428,081 + Pf6N2E2_2936 0.58 +3.4 3,428,142 - Pf6N2E2_2936 0.64 +2.9 3,428,142 - Pf6N2E2_2936 0.64 +3.7 3,428,142 - Pf6N2E2_2936 0.64 +2.0 3,428,152 - Pf6N2E2_2936 0.65 +3.3 3,428,183 + Pf6N2E2_2936 0.67 +3.8 3,428,183 + Pf6N2E2_2936 0.67 +3.0 3,428,184 - Pf6N2E2_2936 0.68 +3.1 3,428,267 + Pf6N2E2_2936 0.75 +2.6 3,428,267 + Pf6N2E2_2936 0.75 +3.0 3,428,268 - Pf6N2E2_2936 0.75 +2.7 3,428,268 - Pf6N2E2_2936 0.75 +1.4 3,428,305 + Pf6N2E2_2936 0.79 +3.3 3,428,348 + Pf6N2E2_2936 0.83 +2.8 3,428,417 + Pf6N2E2_2936 0.89 +3.2 3,428,418 - Pf6N2E2_2936 0.89 +3.8 3,428,466 + +2.8 3,428,466 + +2.6 3,428,466 + +2.6 3,428,467 - +2.7 3,428,627 - -0.2 3,428,659 + +3.1 3,428,659 + +3.3 3,428,659 + +2.4 3,428,659 + +2.4 3,428,659 + +3.0 3,428,660 - +0.6 3,428,669 + +3.5
Or see this region's nucleotide sequence